 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | RPAP2,PMM2,VAMP1,CPLANE1,PUM1,TTF2,MYCBP2,ERI2,TBC1D24,MFSD8,GLYR1,ANAPC1,MAST3,BRD1,SPATA13,MZF1,TTC31,DHX38,MAPK8IP3,DCP1A,SUGP2,RPS6KA3,N4BP2L2,SLF2,L3HYPDH,DMTF1,RNF34,ZDHHC23,FAM193A,UNKL,PIGG,NUP50,UBE4A,USP36,WDCP,VPS39,KMT2B,STAT2,VMP1,ZFP14,CENATAC,WDR5B,SAFB2,KLHL28,KCTD13,MSANTD2,TUBGCP6,TIMELESS,CCDC14,NUP58,SMARCC2,AFF4,MYO9A,RNF38,PIAS3,CLK4,LBR,PARG,ZBED5,RPAP1,IBTK,SETD2,RNF40,RABGGTB,TTC14,CCNK,KNTC1,CEP72,CREB1,SLC2A11,SUDS3,SPG7,KDM5A,EXOC8,PPIP5K2,C19orf44,USP49,SCYL3,PPIP5K1,CLCN6,ECHDC2,OGT,CLK2,NCBP1,RNF19A,ARID4B,ASH1L,POLG2,FANCD2,PTAR1,TUT4,DNAJC16,RBM15,CEP152,CIT,FAN1,METTL17,MGRN1,RIC8B,CPSF7,MORC2,NPHP4,THOC2,CTC1,CLK1,ATXN7,OTULIN,GABPB1,RABL2A,GTF3C2,VPS36,PEAK1,ACYP1,FBXO38,RFX7,IQGAP3,IFT172,HELLS,FOXJ3,VTI1A,PURA,NCOA6,HGS,RSRC2,TTC21B,SNX27,NPAT,NAPB,RAF1,ANKRD11,AP1G1,ARID1A,RAB3GAP2,NAA25,NEMP1,EML4,SETD5,ZFP62,MIS18BP1,GON4L,MDN1,SOCS4,CEP104,ORMDL1,CHD9,BRAF,ZNF45,RALGAPA2,YTHDC1,TOPBP1,MBD4,ORC2,NFKBIZ,SBNO1,SRSF2,PHC3,PRRC1,CDK11A,CAMSAP1,TFCP2,PASK,DHX35,ZZEF1,ABHD16A,SKIL,INTS2,SUPT20H,CCDC191,NXF1,DCUN1D2,HIF1AN,ANKRD28,FIGNL1,NR2C2,PAN2,SLFN13,PPP4R2,TAF1A,SMARCAD1,GIGYF1,STX6,GTSE1,KHNYN,FAM193B,PKN2,BRD2,LSM11,ABCA7,COG7,CCDC186,NRDE2,NCAPG2,PIK3C2B,IPO9,METTL4,FITM2,ATG2B,ZFC3H1,HUWE1,MTMR4,ARHGAP33,MBTD1,DMAC2L,CENPE,ATXN2L,SP3,DNASE1,SEPSECS,ARHGEF7,AP4E1,TNPO2,ANKRD13C,DDX42,CCNT1,VCPKMT,HIPK1,CEP192,ARHGEF11,EIF4A1,PIK3C2A,MRPS25,VPS13A,POLM,PALB2,GOLGA2,ATF7IP,MARCHF6,SWT1,LTN1,ZMYM1,HERC4,RNF214,IQCC,AMMECR1L,PIK3R4,ATM,FLVCR1,MBOAT1,FANCL,ILF3,TTC17,CDK13,DPY19L3,SMG7,LENG8,PER2,SH2B1,TRAF6,CSNK1G1,UBE2G2,MIB1,ARIH2,SPICE1,PPWD1,RC3H2,RELCH,MAZ,MLLT6,PRPF40A,SLC30A7,SASS6,AHI1,CLASP1,INO80D,NHLRC3,DDX55,COG8,CASP2,KRIT1,CAPN10,AP1G2,FAM111A,BANP,THOC1,ANKMY1,WDR59,UBA6,UBR1,WAPL,FANCA,CHD8,PHF12,BEND3,TNKS2,ZZZ3,DENND6A,ODR4,ZMYM5,C2CD3,UBR4,PDP2,TMED8,NBEAL2,SNRNP48,RC3H1,CBLB,XPO4,SETX,BCOR,ZNF44,SLC12A6,TOP3A,SMG1,PKD1,METAP1D,XIAP,BCLAF3,SEMA4D,PPM1B,PUS7L,MTOR,MCM9,UTP14C,IFT80,ALS2CL,RFWD3,ZCCHC14,CEP83,NEK9,GGNBP2,MYO5C,ATP11A,EP400,CDK5RAP2,UBN2,KIAA0586,LRIG2,SEC23IP,ABHD18,SESTD1,NEMF,RTTN,SLC5A3,IWS1,SMCHD1,PRR12,SLX4,MECP2,AFDN,ANGEL1,SMYD4,PEX26,IKBKB,NBPF11,UBAP2L,RPRD1B,PRKD3,ACIN1,ZNF41,ZC3H8,LATS1,E2F7,TNRC18,SART3,DGKE,MAU2,ENOSF1,ANKRD49,PAXBP1,KNOP1,GANC,TADA2A,FNBP4,GTF2A1,CEP85,ZNF28,KMT2D,SYNRG,BOD1L1,RSRP1,TMF1,SSH2,EYA3,MLLT10,CENPO,CHD2,TSTD2,RNF31,GOLGA4,USP40,MED23,GPR180,NVL,ATG14,GOLGB1,RP5-1086D14.6,PWWP2A,NBPF15,ERN1,OTUD4,ANKLE2,TUBGCP3,SPTAN1,ZNF720,STIL,MIER3,TMPO,HERC1,BTBD7,ROCK2,ANKRD26,SCAF11,GGA2,DDX11,FBXL8,WAC,MRE11,GK5,LSG1,RBM6,EHMT1,TRMT13,GDAP2,SLC23A2,PDS5B,TP53BP1,EDEM3,CCDC82,ARHGAP12,ARID4A,NT5C2,ATP6V0A2,VPS54,CCDC142,ELP1,PAXIP1,KIF18B,TTC37,SYNE2,NOM1,CBX5,EPM2AIP1,TGOLN2,PGM3,TIMM23B,SYNGAP1,XAF1,CHD1,FANCC,MAML1,WDR27,GTF3C4,HECTD4,EME2,YY1AP1,KHDC4,PLXNB1,TPR,EP400P1,MIDEAS,HPS4,NBPF1,PNISR,GEN1,SFPQ,TMEM63A,CEPT1,USP45,UBE3B,CARD8,DMXL2,LMLN,ATAD2B,ZNF10,NISCH,EVI5,NCOA2,CLCN7,FAM126B,ATAT1,ALG11,DNMT1,PLCG1,ESCO1,RALGAPA1,CEP120,TMX3,KLF12,CDC42BPA,B3GALNT2,ANGEL2,BICRA,WDR11,TGFBRAP1,ATXN7L2,ROCK1,KDM3B,ADPGK,N4BP2,MYSM1,MED13L,POLH,E2F8,AKAP8,CEP250,ARID2,NUP214,FBXO41,ASPM,SMG6,VPS13B,NEK4,TAF4,PLEKHH1,CEP95,CCDC174,NUP153,TTI1,SPIN3,TBRG1,TBP,SLX4IP,HEATR1,KLHDC4,PBRM1,CCNL2,URB2,TET3,TICRR,NR6A1,PDPK1,PRR14L,CLK3,RNPC3,BARD1,ANKRD10,TENT4A,INCA1,UBXN7,LRCH3,MNT,SON,CHTOP,DOP1A,KIAA2026,KANSL3,KMT2C,CCSAP,DDTL,SIKE1,SCAF4,PHF8,RLIM,SSH1,MPHOSPH9,CCNT2,HECTD1,OSBPL7,PTCD3,EDC4,NFRKB,ZNF91,CHD6,AGO2,BRWD1,CNOT1,CSTF3,DDI2,RBM26,XRCC2,NAPEPLD,PCSK7,TUBGCP5,RBM25,FBXW7,SLC7A6OS,RO60,TBCK,ACBD3,KLHL9,MLH3,SPRTN,SETD6,KANSL1L,POLI,UBR5,PRPF39,ITSN2,RESF1,KIF24,KIAA0753,ENTPD4,TRIM45,NDOR1,SMC5,DCAF17,SRRM2,HEATR5B,ZNF106,BRCA2,BTN2A1,EPC1,LCOR,DDHD1,PABIR2,MAP4K5,SLC4A7,CMTR2,GORAB,HEATR6,UBR3,HEXIM2,FBXL20,CENPC,RBM41,HSF4,PROSER3,HERC2,ANKS3,ARGLU1,LIG4,CIAO1,POLQ,TUBGCP4,CCNL1,RUBCN,USP37,USP19,ANKRA2,SGSM2,C2orf49,POMT2,POLK,SOGA1,NCOR1,CELF1,TMEM161B,EPG5,MADD,RBM45,NFXL1,WRN,PRDM2,RBL1,TBC1D2B,R3HDM2,PMS1,QRICH1,FAM160A2,BAZ1B,USP12,ZGPAT,ADCY6,WDR36,TIA1,HOOK2,ZNF83,RANBP10,PPP4R3A,MOSMO,HCN3,KANSL1,NSUN6,ZNF8,ZMYM3,DNMT3A,ABCD4,SYNJ1,CDK2,CAD,ERCC3,RUSF1,NEIL1,FAM161A,RBBP5,KDM2B,SZT2,POLE,DDX5,USP48,GRIPAP1,STX17,HELZ,GTF3C1,LRRK1,BRCA1,STK4,ELF2,CRAMP1,LUC7L,SPOPL,CENPI,WDR6,PNN,MICAL3,BRD8,CCAR1,GAPVD1,TMCC1,UBE2V1,ARHGAP5,DGKD,CENPJ,CASP8,SNX13,TRA2A,AREL1,MAPKAPK5,KMT2A,TPP2,REV1,NEURL4,BROX,NR2C1,MFAP3,BRD9,ADAT1,NRIP2,CNTROB,DYNC1LI2,SOS1,RUFY2,WBP1,TEPSIN,RBM33,HCFC1,AVL9,NOL8,WDR37,LRCH4,AGAP6,GGA3,RBM19,DSTYK,GABPB2,TRIM66,MAPKBP1,RBM39,SLC26A6,GPATCH8,TNPO1,TRIM25,PGS1,MSL2,PDZD8,MDC1,STAG1,CLEC16A,ZCCHC8,NRF1,GXYLT1,WASHC4,ZXDC,INTS3,FNDC3A,PIGL,ZC3H7A,GBA2,CSAD,KIAA0895L,BAZ2A,ATRX,BRIP1,MAP3K2,GPATCH2,RBM28,DCAF8,IKZF5,C2CD5,KIF21B,PHYKPL,SF3B1,NHLRC2,ZBTB5,RUFY3,BCLAF1,MAP3K4,OGA,ZFYVE26,RASAL2,RECQL5,PAN3,CEP350,MAP3K9,KMT2E,CLASP2,DCAF16,GOLGA1,ZC3H4,NUMB,SUPT7L,PSME4,QSOX2,RICTOR,CENPT,PEX1,S100PBP,ANKRD52,DPP8,MTG1,USP24,KAT6B,APAF1,FBXW8,POGZ,FAM76B,USP7,BRWD3,RBM4B,TSC2,EXOG,PCNT,USP54,C21orf58,TAF1C,RBM14,ADNP,MAP3K12,NCOA5,MBD1,GABRE,IKZF4,MYO19,TCEANC2,GAN,ARID1B,FUBP1,DCAF5,NF1,GCN1,CAPN15,TCF20,SMPD4,TRIM33,WDR20,LRP6,EZH1,MRNIP,KIF14,DHX15,ELMOD3,SS18L1,DCAF1,FBXW2,DDX17,FBH1,POLR3A,KIF20B,ABL2,SLC7A6,HAUS5,SENP7,MTRF1,FMR1,RAD52,CEP43,DHX33,EPB41,ASXL2,STRN,CTDSPL2,MARF1,TAF2,SEC16A,INO80,CEP290,SDR39U1,TRIP11,TRPM7,MCM8,SMC6,CDAN1,WSB1,SLC24A1,MAP4K3,MKLN1,C16orf87,UBFD1,ATAD5,PHIP,PFAS,VPS52,RSPRY1,ALS2,ABCC5,ELK4,CNNM3,NSD2,TRIM52,NCBP3,DEPDC5,USF3,FBXO11,LPIN2,ZC3HAV1L,CCDC93,DFFB,TTC13,MBD6,STK36,BRPF3,MTX3,GOLGA8B,YOD1,UBAP2,MCM3AP,HP1BP3,ALPK1,ACP6,STRADA,VPS13C,ZFX,CBWD2,DIDO1,GOLGA8A,LMBRD2,FKTN,SETD4,ARNT,CREBBP,HTT,PSMC3IP,PIKFYVE,AARSD1,PUM2,TYW5,RBM5,DNAJC11,DHX36,NKTR,CEP162,TRIP12,RAD18,MTF1,FARP2,C19orf71,ZNF17,SRCAP,DOT1L,TTLL3,RNF169,TUBE1,ZNF84,BAZ2B,CCP110,PARP6,BICRAL,WDR33,KIF15,WDR26,LONP2,TRA2B,CLSPN,PRPF40B,FRYL,LRP5L,KATNIP,JMJD1C,TBC1D31,ASXL1,TSC1,DENND4B,NSUN3,SPG11,TEP1,RPRD2,FBXO42,MAN2C1,USPL1,NCAPD3,LIG1,WHAMM,PRPF4B,CCDC57,TET2,PIP5K1A | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | TRIM33,C16orf72,GIGYF2,DNASE1,CCNT1,ESPL1,MECP2,WAC,BAZ2A,VPRBP,NBEAL2,PGS1,C21orf58,DGCR8,USP36,BRIP1,FAN1,EFHC1,CDK5RAP2,TRA2A,FITM2,STX16,UTP20,HUWE1,KIAA0355,CASP8AP2,GTF3C2,ZFP14,KLHL9,AGO2,EP300,STAT2,SNX27,PRPF40B,SETD6,FUBP1,YLPM1,UBXN7,ANKRD13C,NLK,TET2,INTS3,SLC30A7,HIP1R,ARID4B,HERC4,DHX33,ZFYVE26,MAPK8IP3,UHRF1BP1,CCDC66,RASAL2,EVI5,MZF1,SOS1,SSH1,C2CD5,KIF24,BTBD7,STRADA,MFAP3,AHI1,METTL22,PRKD3,SPICE1,GRIPAP1,RAF1,FBXO42,DNAJC16,PLEKHH1,IFT81,DHX15,GPATCH2L,CDK13,FAM111A,RUFY2,CFLAR,CARD8,GANC,ERCC3,ERI2,ARGLU1,DCAF8,TNKS2,GK5,PCNT,GGA3,ATAT1,CCSAP,NFRKB,CBFA2T2,XAF1,BRWD1,XPO4,REST,FANCA,DENND6A,TUBGCP4,CTC1,MPHOSPH8,ANGEL1,CDK2,HERC2,EP400NL,CHD9,WDR48,KLHDC4,SYNJ1,ADAT1,NAPEPLD,RBM19,KIAA1551,ADNP,FBXL20,AGO4,INPP4A,SLC4A7,ELMSAN1,SEC23IP,USP9X,RRP7BP,AGO1,KIF2A,ZC3H11A,SDR39U1,ACBD3,GTF3C1,TRIO,PIK3R4,FAM122B,PFAS,ESCO1,SEPSECS,XIAP,MLLT10,CTDSPL2,MPHOSPH9,DDX46,ENGASE,SETX,BDP1,WSB1,USP33,ANGEL2,VPS8,LIMD1,MLXIP,ING5,GTF2I,LPIN2,CEP120,MAN2C1,CEPT1,ZC3H4,CEP135,KNTC1,TRIM25,TICRR,AARSD1,KIF15,PAN3,PRRC2B,COG7,ATAD5,MCM3AP,MDM4,SUPT20H,CCDC174,KDM5A,NCAPD3,WDR60,HAUS5,SLC23A2,UBAP2L,KIF14,TAF1C,RAD52,ALPK1,GORAB,IFT80,SMG1,NCOA6,E2F7,CDK12,LONP2,BPTF,RPAP1,CLK2,EPC1,GCN1,TBP,DDX17,E2F8,KANSL1L,MSL2,C19orf44,ZNF720,NUMB,TAF2,ZNF83,RSPRY1,PRPF3,PIAS3,INO80D,LUC7L,DOT1L,PHACTR4,YOD1,TUBGCP3,SIN3B,HEATR6,TOPBP1,YEATS2,ANKRD28,ZNF45,RFWD3,TRAPPC10,ABHD18,EYA3,ANKRD26,NFX1,PDP2,N4BP2,ITPR3,MAVS,GAPVD1,TAF1A,ARFGEF2,WAPL,AREL1,RALGAPA1,BAZ1B,NEU3,TIMELESS,ABCD4,MFSD8,TGFBRAP1,UBR5,FANCI,STK36,LRCH3,CCNL1,WDR20,S100PBP,FANCD2,CPSF7,RLIM,SENP5,SLX4,RBM6,FKTN,ZCCHC11,KIAA0556,CDAN1,PEAK1,ABHD16A,NEK4,ZC3HAV1L,BRCA2,ZYG11B,ATXN1L,GABPB1,GTF2H4,MAST3,SMARCC2,SETD2,PLXNA3,VPS13C,ORC2,SLC12A6,ITCH,SRRM2,ACP6,C16orf87,MED12,UHRF2,CBL,TIA1,RBM5,CEP290,NCBP3,CENPE,AP1G2,RIF1,CELF1,ENOSF1,NCOR1,XRCC2,BANP,ANKRD52,CENPJ,DPP8,CCDC82,VAMP1,TMEM120B,RALGPS1,KIAA0907,SRSF5,TRAF5,MAU2,DNMT1,CLASP1,SETD4,CEP162,HCN3,SIKE1,SUZ12,EZH1,TEP1,R3HDM2,CAD,FANCC,GIT2,PIK3C2B,POLR3A,MED13,LMTK2,BRPF3,CHD8,ZZEF1,TFCP2,TMCC1,TMX3,RSRC2,RANBP2,ODF2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | UQCR11,COX4I1,RPL35,RHOC,GPX4,NDUFS8,RNF181,UQCRQ,MICOS13,MYL6,FIS1,COX6B1,PFDN5,PSME1,UBA52,HIGD2A,GSTO1,MRPL54,RPL32,CHCHD5,RPS11,AP2S1,PFN1,PSMB6,ARPC4,TSPO,SPAG7,EDF1,NOP10,ATP6V1F,OAZ1,GPX1,RPS8 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000260853 | ENSG00000006432 | MAP3K9 | CESC,COAD,LUAD,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000051341 | POLQ | CESC,COAD,DLBC,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000051825 | MPHOSPH9 | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000064687 | ABCA7 | CESC,DLBC,LUAD,LUSC,OV | CESC | | | ENSG00000260853 | ENSG00000066279 | ASPM | CESC,COAD,DLBC,LUAD,LUSC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000075218 | GTSE1 | CESC,DLBC,LUSC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000083093 | PALB2 | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000092853 | CLSPN | CESC,DLBC,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000095066 | HOOK2 | CESC,LUAD,LUSC,OV,READ | CESC | | | ENSG00000260853 | ENSG00000102287 | GABRE | CESC,COAD,LUAD,LUSC,READ | CESC,READ | | | ENSG00000260853 | ENSG00000102384 | CENPI | CESC,COAD,DLBC,LAML,READ | CESC,READ | | | ENSG00000260853 | ENSG00000103037 | SETD6 | CESC,COAD,LAML,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000103168 | TAF1C | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000103326 | CAPN15 | CESC,DLBC,ESCA,LUSC,OV | CESC | | | ENSG00000260853 | ENSG00000103995 | CEP152 | CESC,COAD,DLBC,ESCA,LUSC,TGCT | CESC | | | ENSG00000260853 | ENSG00000105486 | LIG1 | CESC,LAML,LUSC,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000106144 | CASP2 | CESC,COAD,DLBC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000109685 | NSD2 | CESC,COAD,DLBC,LAML,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000111602 | TIMELESS | CESC,DLBC,LAML,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000115207 | GTF3C2 | CESC,DLBC,LAML,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000115687 | PASK | CESC,COAD,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000116830 | TTF2 | CESC,COAD,DLBC,LAML,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000117616 | RSRP1 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ | CESC | | | ENSG00000260853 | ENSG00000118193 | KIF14 | CESC,COAD,DLBC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000119285 | HEATR1 | CESC,COAD,DLBC,LUAD,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000119969 | HELLS | CESC,COAD,DLBC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000120662 | MTRF1 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV | CESC | | | ENSG00000260853 | ENSG00000120802 | TMPO | CESC,DLBC,ESCA,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000122966 | CIT | CESC,COAD,DLBC,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000123374 | CDK2 | CESC,DLBC,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000123473 | STIL | CESC,COAD,DLBC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000124181 | PLCG1 | CESC,COAD,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000125885 | MCM8 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000126001 | CEP250 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000130695 | CEP85 | CESC,DLBC,LAML,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000132199 | ENOSF1 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000132436 | FIGNL1 | CESC,COAD,DLBC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000132680 | KHDC4 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000135763 | URB2 | CESC,DLBC,LAML,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000136492 | BRIP1 | CESC,COAD,DLBC,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000137343 | ATAT1 | CESC,COAD,DLBC,ESCA,LAML,OV,READ | READ | | | ENSG00000260853 | ENSG00000138092 | CENPO | CESC,DLBC,LAML,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000138182 | KIF20B | CESC,COAD,DLBC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000138834 | MAPK8IP3 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000139618 | BRCA2 | CESC,COAD,DLBC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000143630 | HCN3 | CESC,COAD,ESCA,LAML,LUAD,LUSC,OV | CESC | | | ENSG00000260853 | ENSG00000143924 | EML4 | CESC,COAD,DLBC,ESCA,LUAD,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000146830 | GIGYF1 | CESC,COAD,DLBC,ESCA,LAML,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000146918 | NCAPG2 | CESC,COAD,DLBC,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000147162 | OGT | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000148824 | MTG1 | CESC,COAD,DLBC,ESCA,LAML,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000149346 | SLX4IP | CESC,COAD,DLBC,LAML,LUAD,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000151503 | NCAPD3 | CESC,DLBC,LUAD,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000151849 | CENPJ | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000152749 | GPR180 | CESC,COAD,DLBC,ESCA,TGCT | CESC | | | ENSG00000260853 | ENSG00000154760 | SLFN13 | CESC,DLBC,ESCA,LUAD,OV | CESC | | | ENSG00000260853 | ENSG00000156876 | SASS6 | CESC,COAD,DLBC,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000160298 | C21orf58 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV | CESC | | | ENSG00000260853 | ENSG00000160796 | NBEAL2 | CESC,DLBC,LUAD,LUSC,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000161960 | EIF4A1 | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000162065 | TBC1D24 | CESC,COAD,DLBC,LAML,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000162769 | FLVCR1 | CESC,COAD,DLBC,ESCA,LAML,LUAD,READ | CESC,READ | | | ENSG00000260853 | ENSG00000163013 | FBXO41 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000163482 | STK36 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000163611 | SPICE1 | CESC,COAD,DLBC,LAML,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000163781 | TOPBP1 | CESC,COAD,DLBC,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000164050 | PLXNB1 | CESC,COAD,LAML,LUAD,LUSC,OV,READ | CESC,READ | | | ENSG00000260853 | ENSG00000165288 | BRWD3 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000165661 | QSOX2 | CESC,DLBC,LAML,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000166801 | FAM111A | CESC,COAD,DLBC,ESCA,OV,READ | CESC | | | ENSG00000260853 | ENSG00000166881 | NEMP1 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000167615 | LENG8 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000168411 | RFWD3 | CESC,COAD,DLBC,LAML,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000175265 | GOLGA8A | CESC,COAD,ESCA,LUAD,LUSC,OV,READ | CESC | | | ENSG00000260853 | ENSG00000175455 | CCDC14 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ | CESC | | | ENSG00000260853 | ENSG00000176208 | ATAD5 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000177084 | POLE | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000178295 | GEN1 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000178409 | BEND3 | CESC,DLBC,ESCA,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000180667 | YOD1 | CESC,COAD,LUAD,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000183397 | C19orf71 | CESC,COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000183856 | IQGAP3 | CESC,COAD,DLBC,ESCA,LUSC,OV,READ | CESC,READ | | | ENSG00000260853 | ENSG00000184307 | ZDHHC23 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000184402 | SS18L1 | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000184445 | KNTC1 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000184465 | WDR27 | CESC,COAD,DLBC,ESCA,LAML,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000186166 | CENATAC | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000186185 | KIF18B | CESC,DLBC,ESCA,LAML,LUSC,OV,READ | CESC,READ | | | ENSG00000260853 | ENSG00000186638 | KIF24 | CESC,COAD,DLBC,LAML,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000187741 | FANCA | CESC,COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000187951 | RP5-1086D14.6 | CESC,DLBC,ESCA,LAML,TGCT | CESC | | | ENSG00000260853 | ENSG00000188566 | NDOR1 | CESC,DLBC,LAML,OV,TGCT | CESC | | | ENSG00000260853 | ENSG00000188827 | SLX4 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000196187 | TMEM63A | CESC,COAD,ESCA,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000196584 | XRCC2 | CESC,COAD,DLBC,LAML,READ,TGCT | CESC,READ | | | ENSG00000260853 | ENSG00000196678 | ERI2 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ,TGCT | CESC | | | ENSG00000260853 | ENSG00000197774 | EME2 | CESC,COAD,DLBC,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000204149 | AGAP6 | CESC,COAD,DLBC,ESCA,LAML,OV,READ | READ | | | ENSG00000260853 | ENSG00000214021 | TTLL3 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000221978 | CCNL2 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000249115 | HAUS5 | CESC,DLBC,LAML,LUAD,LUSC,OV,READ | CESC,READ | | | ENSG00000260853 | ENSG00000256525 | POLG2 | CESC,COAD,DLBC,ESCA,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000278259 | MYO19 | CESC,COAD,DLBC,LAML,LUAD,LUSC,OV,READ | CESC | | | ENSG00000260853 | ENSG00000080839 | RBL1 | COAD,DLBC,LUAD,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000100068 | LRP5L | COAD,ESCA,LUAD,LUSC,READ | READ | | | ENSG00000260853 | ENSG00000103064 | SLC7A6 | COAD,DLBC,LAML,LUAD,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000116852 | KIF21B | COAD,DLBC,ESCA,LUAD,READ | READ | | | ENSG00000260853 | ENSG00000140534 | TICRR | COAD,DLBC,LAML,LUSC,OV,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000143498 | TAF1A | COAD,DLBC,LUAD,READ,TGCT | READ | | | ENSG00000260853 | ENSG00000162836 | ACP6 | COAD,ESCA,LUAD,LUSC,READ | READ | | | ENSG00000260853 | ENSG00000168096 | ANKS3 | COAD,ESCA,LAML,LUAD,LUSC,OV,READ | READ | | | ENSG00000260853 | ENSG00000215252 | GOLGA8B | COAD,DLBC,ESCA,LAML,LUAD,LUSC,OV,READ | READ | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000197323 | TRIM33 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000197323 | TRIM33 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000204120 | GIGYF2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000204120 | GIGYF2 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000129315 | CCNT1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000129315 | CCNT1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000076108 | BAZ2A | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000145041 | DCAF1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000136492 | BRIP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000136492 | BRIP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000198690 | FAN1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000198690 | FAN1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000118412 | CASP8AP2 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000123908 | AGO2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000123908 | AGO2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000143376 | SNX27 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000162613 | FUBP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000162613 | FUBP1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000119596 | YLPM1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000119596 | YLPM1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000163960 | UBXN7 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000168769 | TET2 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000143624 | INTS3 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000162695 | SLC30A7 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000054267 | ARID4B | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000054267 | ARID4B | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000072121 | ZFYVE26 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000072121 | ZFYVE26 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000065060 | UHRF1BP1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000180376 | CCDC66 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000180376 | CCDC66 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000115904 | SOS1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000115904 | SOS1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000011114 | BTBD7 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000011114 | BTBD7 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000135541 | AHI1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000163611 | SPICE1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000116138 | DNAJC16 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000109606 | DHX15 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000109606 | DHX15 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000089916 | GPATCH2L | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000089916 | GPATCH2L | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000065883 | CDK13 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000003402 | CFLAR | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000105483 | CARD8 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000196678 | ERI2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000196678 | ERI2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000160299 | PCNT | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000185658 | BRWD1 | 5 | CESC,COAD,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000132953 | XPO4 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000084093 | REST | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000174839 | DENND6A | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000137822 | TUBGCP4 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000137822 | TUBGCP4 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000196199 | MPHOSPH8 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000128731 | HERC2 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000177200 | CHD9 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000177200 | CHD9 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000159082 | SYNJ1 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000101126 | ADNP | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000101126 | ADNP | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000134698 | AGO4 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000134698 | AGO4 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000033867 | SLC4A7 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000058673 | ZC3H11A | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000058673 | ZC3H11A | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000038382 | TRIO | 5 | CESC,COAD,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000141446 | ESCO1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000141446 | ESCO1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000109618 | SEPSECS | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000051825 | MPHOSPH9 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000051825 | MPHOSPH9 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000145833 | DDX46 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000145833 | DDX46 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000107290 | SETX | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000145734 | BDP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000145734 | BDP1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000109046 | WSB1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000174606 | ANGEL2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000174606 | ANGEL2 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000156931 | VPS8 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000156931 | VPS8 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000144791 | LIMD1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000174799 | CEP135 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000184445 | KNTC1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000184445 | KNTC1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000152520 | PAN3 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000152520 | PAN3 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000176208 | ATAD5 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000176208 | ATAD5 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000160294 | MCM3AP | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000118193 | KIF14 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000157106 | SMG1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000157106 | SMG1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000102910 | LONP2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000102910 | LONP2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000171634 | BPTF | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000171634 | BPTF | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000100201 | DDX17 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000100201 | DDX17 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000144445 | KANSL1L | 5 | CESC,COAD,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000197302 | ZNF720 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000197302 | ZNF720 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000114933 | INO80D | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000114933 | INO80D | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000163781 | TOPBP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000163781 | TOPBP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000163872 | YEATS2 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000206560 | ANKRD28 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000206560 | ANKRD28 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000135966 | TGFBRAP1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000104517 | UBR5 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000104517 | UBR5 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000163660 | CCNL1 | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000116497 | S100PBP | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000116497 | S100PBP | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000188827 | SLX4 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000106692 | FKTN | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000134744 | TUT4 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000134744 | TUT4 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000047578 | KATNIP | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000173517 | PEAK1 | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000224470 | ATXN1L | 5 | CESC,COAD,DLBC,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000181555 | SETD2 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000181555 | SETD2 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000129003 | VPS13C | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000129003 | VPS13C | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000167978 | SRRM2 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000110395 | CBL | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000110395 | CBL | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000116001 | TIA1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000116001 | TIA1 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000003756 | RBM5 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000003756 | RBM5 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000198707 | CEP290 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000198707 | CEP290 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000074356 | NCBP3 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000074356 | NCBP3 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000080345 | RIF1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000080345 | RIF1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000149187 | CELF1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000149187 | CELF1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000151849 | CENPJ | 5 | COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000074054 | CLASP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000074054 | CLASP1 | 6 | CESC,COAD,DLBC,LUAD,OV,READ | | ENSG00000260853 | ENSG00000084093 | REST | ENSG00000178691 | SUZ12 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000178691 | SUZ12 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000129566 | TEP1 | 5 | CESC,COAD,DLBC,LUAD,READ | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000139436 | GIT2 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000108510 | MED13 | 5 | CESC,COAD,DLBC,LUAD,OV | | ENSG00000260853 | ENSG00000159140 | SON | ENSG00000111011 | RSRC2 | 5 | COAD,DLBC,LUAD,OV,READ |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000260853 | ENST00000569974 | PFDN5 | ENSG00000123349 | ENST00000551018 | -0.1663 | 142 | - | CESC | | ENSG00000260853 | ENST00000569974 | PFDN5 | ENSG00000123349 | ENST00000351500 | -0.1663 | 142 | - | CESC | | ENSG00000260853 | ENST00000569974 | PFDN5 | ENSG00000123349 | ENST00000550846 | -0.1663 | 142 | - | CESC | | ENSG00000260853 | ENST00000569974 | PFDN5 | ENSG00000123349 | ENST00000334478 | -0.1663 | 142 | - | CESC | | ENSG00000260853 | ENST00000569974 | PFDN5 | ENSG00000123349 | ENST00000549759 | -0.1567 | 145 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000551018 | -0.2040 | 459 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000351500 | -0.2040 | 459 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000550846 | -0.2040 | 459 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000243040 | -0.1060 | 350 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000334478 | -0.2040 | 459 | - | CESC | | ENSG00000260853 | ENST00000568057 | PFDN5 | ENSG00000123349 | ENST00000549759 | -0.1925 | 462 | - | CESC |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000260853.1 | ENST00000569974.1 | 116 | 117 | 467 | | ENSG00000260853.1 | ENST00000568057.1 | 78 | 34 | 270 |
|
