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lncRNA: ENSG00000260401 |
Summary for RP11-800A3.4 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000260401 | Gene symbol | RP11-800A3.4 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | sense_overlapping | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-800A3.4 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000260401 | 1.054733e+03 | 3.911940e+00 | 7.819752e-01 | 5.002639e+00 | 5.660000e-07 | 1.520000e-05 | UP | CESC |
| ENSG00000260401 | 1.346472e+03 | -1.180625e+00 | 1.849356e-01 | -6.383980e+00 | 1.730000e-10 | 1.320000e-09 | DOWN | HNSC |
| ENSG00000260401 | 1.463330e+02 | 1.101988e+00 | 2.462057e-01 | 4.475883e+00 | 7.610000e-06 | 2.800000e-05 | UP | UCEC |
| ENSG00000260401 | 1.776990e+02 | -1.490270e+00 | 1.618256e-01 | -9.209113e+00 | 3.290000e-20 | 4.460000e-19 | DOWN | COAD |
| ENSG00000260401 | 2.830197e+02 | -1.982317e+00 | 3.017071e-01 | -6.570335e+00 | 5.020000e-11 | 7.490000e-10 | DOWN | STAD |
| ENSG00000260401 | 1.890535e+02 | -1.002265e+00 | 2.933588e-01 | -3.416515e+00 | 6.342810e-04 | 3.794796e-03 | DOWN | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for RP11-800A3.4 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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