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lncRNA: ENSG00000259802 |
Summary for CTD-2256P15.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000259802 | Gene symbol | CTD-2256P15.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for CTD-2256P15.2 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000259802 | 7.713955e+01 | -1.510631e+00 | 2.964973e-01 | -5.094924e+00 | 3.490000e-07 | 2.500000e-06 | DOWN | CHOL |
| ENSG00000259802 | 7.934655e+01 | 1.135633e+00 | 2.104507e-01 | 5.396193e+00 | 6.810000e-08 | 7.930000e-07 | UP | BLCA |
| ENSG00000259802 | 5.101357e+01 | 1.179881e+00 | 1.456268e-01 | 8.102082e+00 | 5.400000e-16 | 6.230000e-15 | UP | UCEC |
| ENSG00000259802 | 6.963489e+01 | 1.047414e+00 | 3.086897e-01 | 3.393097e+00 | 6.910720e-04 | 5.908011e-03 | UP | ESCA |
| ENSG00000259802 | 1.502541e+02 | 2.278903e+00 | 1.509768e-01 | 1.509439e+01 | 1.760000e-51 | 4.510000e-50 | UP | LUSC |
| ENSG00000259802 | 8.343245e+01 | 1.425931e+00 | 1.468253e-01 | 9.711758e+00 | 2.690000e-22 | 3.220000e-21 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000259802 | -3.543091e-01 | 1.694348e-02 | CHOL | 1.877400e-02 |
| ENSG00000259802 | -4.608465e-01 | 5.503273e-06 | KICH | 1.245936e-05 |
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lncRNA-Protein interaction for CTD-2256P15.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000259802 | ENST00000561606 | CTD-2256P15.2 | ENSG00000115241 | PPM1G | 12.75 | 93.6867 | O15355 | Epi | NA |
| ENSG00000259802 | ENST00000561606 | CTD-2256P15.2 | ENSG00000149929 | HIRIP3 | 12.61 | 93.2969 | Q9BW71 | Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000259802 | ENST00000561606 | CTD-2256P15.2 | ENSG00000166526 | ZNF3 | 17.98 | 90.4229 | P17036 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000259802 | ENST00000561606 | CTD-2256P15.2 | ENSG00000204356 | NELFE | 9.76 | 91.696 | P18615 | RBP | NA |
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