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lncRNA: ENSG00000259658 |
Summary for RP11-89K11.1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000259658 | Gene symbol | RP11-89K11.1 |
| Gene name | ||
| HGNC | ||
| Entrez ID | 100128108 | |
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-89K11.1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000259658 | 6.843487e+01 | 1.771458e+00 | 1.243714e-01 | 1.424329e+01 | 4.930000e-46 | 1.010000e-44 | UP | KIRC |
| ENSG00000259658 | 5.531772e+01 | 1.348180e+00 | 2.227049e-01 | 6.053660e+00 | 1.420000e-09 | 9.630000e-09 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000259658 | -3.195285e-01 | 6.692524e-15 | THCA | 9.852882e-14 |
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lncRNA-Protein interaction for RP11-89K11.1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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