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lncRNA: ENSG00000259642 |
Summary for ST20-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000259642 | Gene symbol | ST20-AS1 |
| Gene name | ST20 antisense RNA 1 | |
| HGNC | 27521 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | 15q25.1|ST20-AS1 | |
| UniProtAcc | Q8NBB2 |
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Structure and expression level for ST20-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000259642 | 3.311909e+02 | 1.391502e+00 | 3.587410e-01 | 3.878848e+00 | 1.049520e-04 | 1.894313e-03 | UP | PCPG |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for ST20-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000259642 | ENST00000560255 | ST20-AS1 | ENSG00000176871 | WSB2 | 29.04 | 94.8024 | Q9NYS7 | Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000259642 | ENST00000560255 | ST20-AS1 | ENSG00000179151 | EDC3 | 33.34 | 95.4987 | Q96F86 | RBP | NA |
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