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lncRNA: ENSG00000259485 |
Summary for LINC02253 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000259485 | Gene symbol | LINC02253 |
| Gene name | long intergenic non-protein coding RNA 2253 | |
| HGNC | 53151 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | CTD-2147F2.1|LINC02253|15q26.2 | |
| UniProtAcc |
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Structure and expression level for LINC02253 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000259485 | 1.649997e+02 | 1.031886e+01 | 2.374693e+00 | 4.345344e+00 | 1.390000e-05 | 2.959429e-03 | UP | THYM |
| ENSG00000259485 | 1.077376e+02 | 6.691642e+00 | 3.807782e-01 | 1.757360e+01 | 3.920000e-69 | 1.790000e-67 | UP | LUSC |
| ENSG00000259485 | 7.816380e+01 | 5.634649e+00 | 3.523648e-01 | 1.599095e+01 | 1.480000e-57 | 2.160000e-55 | UP | COAD |
| ENSG00000259485 | 8.808398e+01 | 5.322579e+00 | 6.360738e-01 | 8.367863e+00 | 5.870000e-17 | 2.410000e-15 | UP | STAD |
| ENSG00000259485 | 6.968196e+01 | 7.032744e+00 | 8.505712e-01 | 8.268261e+00 | 1.360000e-16 | 1.400000e-14 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC02253 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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