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lncRNA: ENSG00000258512 |
Summary for LINC00239 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000258512 | Gene symbol | LINC00239 |
| Gene name | long intergenic non-protein coding RNA 239 | |
| HGNC | 20119 | |
| Entrez ID | 145200 | |
| Gene type | lincRNA | |
| Synonyms | 14q32.31|LINC00239 | |
| UniProtAcc |
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Structure and expression level for LINC00239 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000258512 | 2.666569e+01 | 2.552801e+00 | 5.383268e-01 | 4.742104e+00 | 2.120000e-06 | 1.310000e-05 | UP | CHOL |
| ENSG00000258512 | 8.511416e+01 | 2.550004e+00 | 3.037212e-01 | 8.395872e+00 | 4.620000e-17 | 5.750000e-16 | UP | KICH |
| ENSG00000258512 | 2.397243e+01 | 1.886570e+00 | 2.075064e-01 | 9.091624e+00 | 9.760000e-20 | 1.560000e-18 | UP | UCEC |
| ENSG00000258512 | 6.062973e+01 | 1.185097e+00 | 1.953733e-01 | 6.065808e+00 | 1.310000e-09 | 6.990000e-09 | UP | COAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000258512 | 6.342805e-01 | 2.892360e-06 | CHOL | 3.378437e-05 |
| ENSG00000258512 | 5.607934e-01 | 1.093162e-08 | KICH | 5.913346e-08 |
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lncRNA-Protein interaction for LINC00239 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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