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lncRNA: ENSG00000258053 |
Summary for CTD-2021H9.3 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000258053 | Gene symbol | CTD-2021H9.3 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for CTD-2021H9.3 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000258053 | 1.236641e+02 | 3.340850e+00 | 6.865759e-01 | 4.865959e+00 | 1.140000e-06 | 9.990000e-06 | UP | BLCA |
| ENSG00000258053 | 6.451111e+01 | 3.783287e+00 | 4.386575e-01 | 8.624696e+00 | 6.430000e-18 | 1.100000e-16 | UP | HNSC |
| ENSG00000258053 | 1.367610e+02 | 6.540111e+00 | 3.389230e-01 | 1.929675e+01 | 5.720000e-83 | 3.910000e-81 | UP | LUSC |
| ENSG00000258053 | 4.070309e+01 | 5.136173e+00 | 4.799502e-01 | 1.070147e+01 | 1.000000e-26 | 1.600000e-25 | UP | LUAD |
| ENSG00000258053 | 4.108515e+01 | 2.879243e+00 | 4.063294e-01 | 7.085983e+00 | 1.380000e-12 | 2.700000e-11 | UP | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for CTD-2021H9.3 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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