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lncRNA: ENSG00000257556 |
Summary for LINC02298 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000257556 | Gene symbol | LINC02298 |
| Gene name | long intergenic non-protein coding RNA 2298 | |
| HGNC | 53216 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | LINC02298|RP11-44N21.1|14q32.33 | |
| UniProtAcc |
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Structure and expression level for LINC02298 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000257556 | 1.291260e+02 | 3.325940e+00 | 4.051003e-01 | 8.210166e+00 | 2.210000e-16 | 6.720000e-15 | UP | CHOL |
| ENSG00000257556 | 1.231418e+02 | 1.130063e+00 | 1.130631e-01 | 9.994980e+00 | 1.600000e-23 | 1.170000e-22 | UP | KIRC |
| ENSG00000257556 | 8.373369e+01 | 1.153826e+00 | 1.894144e-01 | 6.091544e+00 | 1.120000e-09 | 7.700000e-09 | UP | HNSC |
| ENSG00000257556 | 1.291251e+02 | 1.127903e+00 | 2.067049e-01 | 5.456586e+00 | 4.850000e-08 | 2.620000e-07 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000257556 | 5.268681e-01 | 2.006746e-04 | CHOL | 5.083353e-04 |
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lncRNA-Protein interaction for LINC02298 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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