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lncRNA: ENSG00000257086 |
Summary for RP11-783K16.13 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000257086 | Gene symbol | RP11-783K16.13 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-783K16.13 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000257086 | 5.751596e+01 | 2.030340e+00 | 3.220282e-01 | 6.304852e+00 | 2.880000e-10 | 3.490000e-09 | UP | CHOL |
| ENSG00000257086 | 1.050457e+02 | 1.192011e+00 | 1.920489e-01 | 6.206808e+00 | 5.410000e-10 | 9.890000e-09 | UP | BLCA |
| ENSG00000257086 | 5.008058e+01 | 1.114712e+00 | 1.560239e-01 | 7.144495e+00 | 9.030000e-13 | 9.440000e-12 | UP | KIRP |
| ENSG00000257086 | 8.794668e+01 | 1.516634e+00 | 1.179894e-01 | 1.285399e+01 | 8.170000e-38 | 1.250000e-36 | UP | LUSC |
| ENSG00000257086 | 6.949180e+01 | 1.263906e+00 | 7.966266e-02 | 1.586573e+01 | 1.090000e-56 | 2.870000e-55 | UP | BRCA |
| ENSG00000257086 | 4.287462e+01 | 1.002518e+00 | 1.271997e-01 | 7.881447e+00 | 3.240000e-15 | 2.980000e-14 | UP | COAD |
| ENSG00000257086 | 4.330185e+01 | 1.183381e+00 | 2.318024e-01 | 5.105130e+00 | 3.310000e-07 | 4.700000e-06 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000257086 | 3.149448e-01 | 5.274057e-03 | ACC | 1.643862e-02 |
| ENSG00000257086 | 5.574823e-01 | 6.945887e-05 | CHOL | 2.374590e-04 |
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lncRNA-Protein interaction for RP11-783K16.13 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000257086 | ENST00000545800 | RP11-783K16.13 | ENSG00000166987 | MBD6 | 31.65 | 92.0404 | Q96DN6 | TF,Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000257086 | ENST00000545800 | RP11-783K16.13 | ENSG00000166987 | MBD6 | 31.65 | 92.0818 | Q96DN6 | TF,Epi | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000257086 | ENST00000545800 | RP11-783K16.13 | ENSG00000106344 | RBM28 | 41.05 | 92.3053 | Q9NW13 | RBP | NA |
| ENSG00000257086 | ENST00000545800 | RP11-783K16.13 | ENSG00000148840 | PPRC1 | 31.78 | 92.7178 | Q5VV67 | RBP | NA |
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