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lncRNA: ENSG00000255468 |
Summary for RP11-867G23.8 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000255468 | Gene symbol | RP11-867G23.8 |
| Gene name | ||
| HGNC | ||
| Entrez ID | 102724064 | |
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-867G23.8 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000255468 | 1.097666e+02 | 2.626571e+00 | 3.988495e-01 | 6.585370e+00 | 4.540000e-11 | 4.310000e-09 | UP | PCPG |
| ENSG00000255468 | 9.186403e+01 | -1.782198e+00 | 1.092251e-01 | -1.631674e+01 | 7.500000e-60 | 2.600000e-58 | DOWN | LUSC |
| ENSG00000255468 | 1.308732e+02 | -1.278602e+00 | 1.523037e-01 | -8.395083e+00 | 4.660000e-17 | 3.800000e-16 | DOWN | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000255468 | -3.172594e-01 | 3.609459e-15 | LUAD | 5.154308e-14 |
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lncRNA-Protein interaction for RP11-867G23.8 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000255468 | ENST00000581155 | RP11-867G23.8 | ENSG00000141258 | SGSM2 | 15.59 | 93.0972 | O43147 | TF | NA |
| ENSG00000255468 | ENST00000581155 | RP11-867G23.8 | ENSG00000102878 | HSF4 | 4.43 | 90.7641 | Q9ULV5 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000255468 | ENST00000581155 | RP11-867G23.8 | ENSG00000004534 | RBM6 | 22.92 | 93.2133 | P78332 | RBP | High-throughput data combine LncPro prediction |
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