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lncRNA: ENSG00000255310

Summary for AF131215.2

Gene summary

Gene information	Ensembl ID	ENSG00000255310
	Gene symbol	AF131215.2
	Gene name
	HGNC
	Entrez ID
	Gene type	sense_intronic
	Synonyms
	UniProtAcc

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Structure and expression level for AF131215.2

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000255310	1.278499e+02	2.785529e+00	4.400066e-01	6.330652e+00	2.440000e-10	2.990000e-09	UP	CHOL
ENSG00000255310	1.147562e+02	-1.614923e+00	1.760710e-01	-9.171999e+00	4.640000e-20	3.020000e-19	DOWN	LUSC
ENSG00000255310	9.204827e+01	-1.630597e+00	1.730672e-01	-9.421757e+00	4.440000e-21	4.870000e-20	DOWN	LUAD

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000255310	5.623197e-01	5.817486e-05	CHOL	2.047073e-04
ENSG00000255310	-3.986322e-01	9.300261e-24	LUAD	1.660097e-21
ENSG00000255310	-3.296838e-01	2.464973e-15	LUSC	1.306436e-13

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lncRNA-Protein interaction for AF131215.2

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000036257	CUL3	81.11	90.3516	Q13618	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000146247	PHIP	80.41	96.3461	Q8WWQ0	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000077097	TOP2B	79.21	92.4867	Q02880	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000118058	KMT2A	78.55	95.137	Q03164	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000181090	EHMT1	75.78	91.911	Q9H9B1	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000141867	BRD4	74.2	96.1811	O60885	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000185658	BRWD1	63.77	95.5438	Q9NSI6	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000127663	KDM4B	57.97	91.5841	O94953	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000182568	SATB1	57.2	92.3887	Q01826	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000187605	TET3	54.91	93.126	O43151	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000187555	USP7	53.88	93.505	Q93009	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000131149	GSE1	53.58	96.5173	Q14687	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000146872	TLK2	53.04	90.8379	Q86UE8	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000124177	CHD6	51.79	92.2239	Q8TD26	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000171634	BPTF	46.16	95.998	Q12830	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000166987	MBD6	43.17	91.5558	Q96DN6	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000154229	PRKCA	39.43	90.3424	P17252	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000163635	ATXN7	39.34	92.8161	O15265	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000089094	KDM2B	35.73	92.8137	Q8NHM5	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000197323	TRIM33	33.52	94.0173	Q9UPN9	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000032219	ARID4A	79.33	93.0002	P29374	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000092201	SUPT16H	74.49	94.6569	Q9Y5B9	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000064313	TAF2	70.89	95.3798	Q6P1X5	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000147162	OGT	70.79	92.2993	O15294	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000055609	KMT2C	65.23	94.5577	Q8NEZ4	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000165288	BRWD3	62.53	96.4502	Q6RI45	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000005339	CREBBP	58.22	94.8686	Q92793	Epi	ChIP-seq
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000100393	EP300	57.5	94.0587	Q09472	Epi	ChIP-seq
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000116539	ASH1L	56.2	93.3182	Q9NR48	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000168769	TET2	55.41	96.206	Q6N021	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000078403	MLLT10	55.35	91.2802	P55197	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000169375	SIN3A	54.51	93.0759	Q96ST3	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000139687	RB1	48.06	94.6952	P06400	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000189079	ARID2	42.28	92.1627	Q68CP9	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000177189	RPS6KA3	39.81	91.7593	P51812	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000183495	EP400	37.66	95.7473	Q96L91	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000119638	NEK9	31.65	92.4012	Q8TD19	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000178913	TAF7	24.14	90.0469	Q15545	Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000150907	FOXO1	20.18	92.6422	Q12778	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000117222	RBBP5	11.8	91.7751	Q15291	Epi	ChIP-seq

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000118058	KMT2A	78.55	94.8136	Q03164	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000196867	ZFP28	64.48	92.2882	Q8NHY6	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000198455	ZXDB	60.42	90.366	P98169	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000134874	DZIP1	59.71	92.0497	Q86YF9	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000182568	SATB1	57.2	91.2496	Q01826	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000116539	ASH1L	56.2	92.9618	Q9NR48	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000168769	TET2	55.41	95.7445	Q6N021	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000187605	TET3	54.91	92.6955	O43151	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000011451	WIZ	54.9	92.5226	O95785	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000147124	ZNF41	52.96	90.3273	P51814	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000171634	BPTF	46.16	95.6361	Q12830	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000005889	ZFX	44.39	90.8493	P17010	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000117000	RLF	43.44	95.3974	Q13129	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000166987	MBD6	43.17	90.9914	Q96DN6	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000189079	ARID2	42.28	91.6054	Q68CP9	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000169554	ZEB2	40.75	92.6139	O60315	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000136603	SKIL	39.69	90.8143	P12757	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000170448	NFXL1	37.21	91.1467	Q6ZNB6	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000089094	KDM2B	35.73	92.1918	Q8NHM5	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000140836	ZFHX3	33.82	90.3811	Q15911	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000168795	ZBTB5	25.9	91.5563	O15062	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000169981	ZNF35	21.2	90.5439	P13682	TF	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000150907	FOXO1	20.18	92.4415	Q12778	TF,Epi	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000186660	ZFP91	11.87	91.7568	Q96JP5	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000163510	CWC22	73.34	92.4271	Q9HCG8	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000163728	TTC14	68.16	90.9454	Q96N46	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000198000	NOL8	61.81	91.9466	Q76FK4	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000125676	THOC2	45.27	92.0913	Q8NI27	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000148840	PPRC1	43.33	95.1675	Q5VV67	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000135870	RC3H1	40.18	92.5185	Q5TC82	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000156304	SCAF4	31.52	94.162	O95104	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000129351	ILF3	25.97	91.7258	Q12906	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000127993	RBM48	21.03	91.4311	Q5RL73	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000089280	FUS	19.9	93.1809	P35637	RBP	HITS-CLIP,PAR-CLIP
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000196943	NOP9	18.96	91.4117	Q86U38	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000138757	G3BP2	17.88	91.926	Q9UN86	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000111605	CPSF6	14.34	95.047	Q16630	RBP	PAR-CLIP
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000174720	LARP7	12.95	93.7005	Q4G0J3	RBP	NA
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000149532	CPSF7	11.02	92.3631	Q8N684	RBP	PAR-CLIP
ENSG00000255310	ENST00000530248	AF131215.2	ENSG00000132463	GRSF1	10.51	90.5086	Q12849	RBP	NA

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lncRNA-DNA interaction for AF131215.2

lncRNA targets the enhancer region and positively regulates the gene expression.

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for AF131215.2

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

GEMIN7,PUSL1,MPG,DPP7,TTC1,CHMP6,DDT,RNF181,ECH1,NDUFA13,LAMTOR2,NUDT8,S100A11,PNKD,PAXX,ATOX1,FTL,PCYT2,AURKAIP1,RFXANK,ALDOA,NDUFB2,CDC34,UCHL3,THOC6,PET100,GSTP1,SLC25A11,NAA38,CIB1,BLOC1S1,ANAPC11,CORO7,SMPD2,PIN1,BCL7C,ATP6V0B,TMEM53,FPGS,RPS19BP1,CHCHD10,NDUFS5,NME1,ARPC4,SLC25A39,EDF1,FAM50A,IFITM3,AUP1,TMUB1,BCL7B,THAP7,SERF2,THAP4,STYXL1,COMMD9,PARVB,ASPSCR1,ATP5ME,SERPINB6,MRPL27,PSMD13,TFPT,DTX2,DCXR,ISY1,PHPT1,OST4,MIIP,THAP3,YIF1A,GPX4,ANTKMT,SIL1,ARHGDIA,USE1,POLR2J,FAM174C,H2AJ,GAMT,MRPS34,CLTB,PSMB10,STXBP2,MICOS13,CNPY3,NDUFA11,SLIRP,TSR3,SCAND1,ZNRD2,RILP,UQCRC1,MYDGF,PSMC3,GPS1,TMEM208,MRPL55,PSMB9,DHRS4L2,RHOG,SF3B6,CYBA,COPE,FKBP8,UBXN1,NDUFB10,BAD,PPP1CA,EMP3,PYCARD,APRT,NELFE,ATP5PD,JTB,PSENEN,MRPL41,MAD1L1,COMMD1,CCDC124,NDUFB1,COMTD1,PPDPF,ATP5MK,DPM3,DYNLL1,HCST,MPST,MRPL2,SART1,RFNG,GALK1,RBM42,TMEM222,BLVRB,AKR7A2,COA8,MCTS1,MRPL28,RNH1,HMOX2,NDUFC1,TYROBP,NDUFB4,MCRIP1,COX17,CAPG,HSPB1,ELOB,HSD17B10,UQCRQ,AKR1A1,CDK2AP2,HSPBP1,PSME2,NMRAL1,SGF29,PSME1,EIF3G,NAA60,HRAS,MRPL54,PPP1R14B,TACO1,GSTO1,B3GAT3,GUK1,CUTA,TRIR,IDH3G,JOSD2,SURF2,AP2S1,ECI1,GSDMD,ATP5MJ,NDUFB11,PUF60,NDUFS6,VKORC1,NUDT14,NDUFS3,NDUFV2,SSR4,VEGFB,NOSIP,EVA1B,SIGIRR,TSSC4,CIAO2B,COX7A1,NAA10,AIP,IRF3,MGST2,BANF1,IFITM2,TRPT1,OXLD1,ATP5MC1,TRAPPC1,CFL1,POLR2I,PEX16,HINT2,TMEM223,ZDHHC12,C7orf50,PSMG3,RHOC,SLC9A3R2,NDUFS8,NDUFS7,TMEM258,NFKBIL1,FASTK,SNRPA,ATP5F1D,MYL6,FIS1,C19orf53,COPS6,NDUFAB1,ATP5IF1,PPP1R35,SMIM29,UBA52,YIF1B,LST1,TAF10,LSM7,SAT2,TRAPPC2L,MRPS15,ARL2,ATP5MF,PRR13,NDUFB7,TMEM219,IFI27L2,NDUFC2,PHKG2,DUSP23,PSMB3,RANGRF,HSD17B14,FDX2,CD63,ETFB,FKBP2,HCFC1R1,CCS,OCEL1,NDUFB8,NDUFA3,TMEM134,NDUFAF3,CARD16,APOC1,MSRB1

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000255310	ENST00000530248	exon_skip_360302	chr21:42896926-42897047	-15.38	-0.1386	NDUFV3	ENST00000340344	Frame-shift
ENSG00000255310	ENST00000530248	exon_skip_430434	chr4:82356536-82356683	-11.67	-0.1389	HNRNPD	ENST00000313899	In-frame

-lncRNA and exonskipping events are negatively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

LOF

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for AF131215.2

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID	LncRNA ENST ID	PC Gene Name	PC Gene ID	PC ENST ID	dG	nDG	Cancer with PC gene up-regulation	Cancer with PC gene Down-regulation
ENSG00000255310	ENST00000530248	SLC9A3R2	ENSG00000065054	ENST00000563587	-0.1135	85	-	CHOL
ENSG00000255310	ENST00000530248	SLC9A3R2	ENSG00000065054	ENST00000561844	-0.1180	84	-	CHOL
ENSG00000255310	ENST00000530248	FTL	ENSG00000087086	ENST00000331825	-0.1512	816	-	CHOL
ENSG00000255310	ENST00000530248	AKR1A1	ENSG00000117448	ENST00000372070	-0.2139	98	-	CHOL
ENSG00000255310	ENST00000530248	AKR1A1	ENSG00000117448	ENST00000621846	-0.1661	112	-	CHOL
ENSG00000255310	ENST00000530248	AKR1A1	ENSG00000117448	ENST00000351829	-0.2139	98	-	CHOL
ENSG00000255310	ENST00000530248	AKR7A2	ENSG00000053371	ENST00000489286	-0.1501	164	-	CHOL
ENSG00000255310	ENST00000530248	AKR7A2	ENSG00000053371	ENST00000481966	-0.1045	1465	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B10	ENSG00000072506	ENST00000375304	-0.1154	133	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B10	ENSG00000072506	ENST00000168216	-0.1154	133	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B10	ENSG00000072506	ENST00000375298	-0.1108	1	-	CHOL
ENSG00000255310	ENST00000530248	MGST2	ENSG00000085871	ENST00000265498	-0.2406	698	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B14	ENSG00000087076	ENST00000263278	-0.1281	119	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B14	ENSG00000087076	ENST00000599157	-0.1281	119	-	CHOL
ENSG00000255310	ENST00000530248	HSD17B14	ENSG00000087076	ENST00000595764	-0.1270	798	-	CHOL
ENSG00000255310	ENST00000530248	OCEL1	ENSG00000099330	ENST00000215061	-0.1100	24	-	CHOL
ENSG00000255310	ENST00000530248	OCEL1	ENSG00000099330	ENST00000600232	-0.1294	57	-	CHOL
ENSG00000255310	ENST00000530248	OCEL1	ENSG00000099330	ENST00000597836	-0.1485	78	-	CHOL
ENSG00000255310	ENST00000530248	OCEL1	ENSG00000099330	ENST00000595573	-0.1856	869	-	CHOL
ENSG00000255310	ENST00000530248	OCEL1	ENSG00000099330	ENST00000600826	-0.1389	61	-	CHOL
ENSG00000255310	ENST00000530248	DDT	ENSG00000099977	ENST00000398344	-0.1120	8	-	CHOL
ENSG00000255310	ENST00000530248	DDT	ENSG00000099977	ENST00000350608	-0.1120	8	-	CHOL
ENSG00000255310	ENST00000530248	DDT	ENSG00000099977	ENST00000404092	-0.1120	21	-	CHOL
ENSG00000255310	ENST00000530248	DDT	ENSG00000099977	ENST00000403754	-1.1250	1110	-	CHOL
ENSG00000255310	ENST00000530248	ECH1	ENSG00000104823	ENST00000221418	-0.1335	809	-	CHOL
ENSG00000255310	ENST00000530248	ETFB	ENSG00000105379	ENST00000354232	-0.6642	159	-	CHOL
ENSG00000255310	ENST00000530248	ETFB	ENSG00000105379	ENST00000309244	-0.6642	161	-	CHOL
ENSG00000255310	ENST00000530248	GALK1	ENSG00000108479	ENST00000225614	-0.1362	151	-	CHOL
ENSG00000255310	ENST00000530248	GALK1	ENSG00000108479	ENST00000592997	-0.1314	1066	-	CHOL
ENSG00000255310	ENST00000530248	GALK1	ENSG00000108479	ENST00000588479	-0.2356	140	-	CHOL
ENSG00000255310	ENST00000530248	GALK1	ENSG00000108479	ENST00000587707	-0.1009	1626	-	CHOL
ENSG00000255310	ENST00000530248	UCHL3	ENSG00000118939	ENST00000377595	-0.1055	693	LUSC	CHOL
ENSG00000255310	ENST00000530248	TMEM53	ENSG00000126106	ENST00000372235	-0.1518	180	-	CHOL
ENSG00000255310	ENST00000530248	MPST	ENSG00000128309	ENST00000404802	-0.1079	1605	-	CHOL
ENSG00000255310	ENST00000530248	MPST	ENSG00000128309	ENST00000429360	-0.1079	1577	-	CHOL
ENSG00000255310	ENST00000530248	MPST	ENSG00000128309	ENST00000397225	-0.1079	1578	-	CHOL
ENSG00000255310	ENST00000530248	GAMT	ENSG00000130005	ENST00000252288	-0.1315	1544	LUSC,LUAD	CHOL
ENSG00000255310	ENST00000530248	GAMT	ENSG00000130005	ENST00000591788	-0.1932	179	LUSC,LUAD	CHOL
ENSG00000255310	ENST00000530248	APOC1	ENSG00000130208	ENST00000588750	-0.1674	1114	-	CHOL
ENSG00000255310	ENST00000530248	APOC1	ENSG00000130208	ENST00000588802	-0.1767	1110	-	CHOL
ENSG00000255310	ENST00000530248	APOC1	ENSG00000130208	ENST00000592885	-0.1767	1112	-	CHOL
ENSG00000255310	ENST00000530248	APOC1	ENSG00000130208	ENST00000589781	-0.1922	1113	-	CHOL
ENSG00000255310	ENST00000530248	APOC1	ENSG00000130208	ENST00000586638	-0.1767	1110	-	CHOL
ENSG00000255310	ENST00000530248	ATP5IF1	ENSG00000130770	ENST00000335514	-0.1626	788	-	CHOL
ENSG00000255310	ENST00000530248	TACO1	ENSG00000136463	ENST00000258975	-0.1047	25	-	CHOL
ENSG00000255310	ENST00000530248	SAT2	ENSG00000141504	ENST00000573566	-0.2545	1779	-	CHOL
ENSG00000255310	ENST00000530248	GSTO1	ENSG00000148834	ENST00000539281	-0.2422	1081	-	CHOL
ENSG00000255310	ENST00000530248	GSTO1	ENSG00000148834	ENST00000369710	-0.2422	1081	-	CHOL
ENSG00000255310	ENST00000530248	GSTO1	ENSG00000148834	ENST00000369713	-0.2422	1083	-	CHOL
ENSG00000255310	ENST00000530248	DCXR	ENSG00000169738	ENST00000577532	-0.1563	1119	-	CHOL
ENSG00000255310	ENST00000530248	DCXR	ENSG00000169738	ENST00000306869	-0.1173	1687	-	CHOL
ENSG00000255310	ENST00000530248	DCXR	ENSG00000169738	ENST00000579004	-0.1511	859	-	CHOL
ENSG00000255310	ENST00000530248	DCXR	ENSG00000169738	ENST00000581584	-0.2676	1733	-	CHOL
ENSG00000255310	ENST00000530248	DCXR	ENSG00000169738	ENST00000579821	-0.1287	69	-	CHOL
ENSG00000255310	ENST00000530248	PCYT2	ENSG00000185813	ENST00000572995	-0.1211	56	-	CHOL
ENSG00000255310	ENST00000530248	PCYT2	ENSG00000185813	ENST00000570388	-1.8160	890	-	CHOL
ENSG00000255310	ENST00000530248	DHRS4L2	ENSG00000187630	ENST00000558753	-1.0133	870	-	CHOL
ENSG00000255310	ENST00000530248	DHRS4L2	ENSG00000187630	ENST00000560276	-0.2470	1741	-	CHOL
ENSG00000255310	ENST00000530248	MSRB1	ENSG00000198736	ENST00000473663	-0.1216	50	LUAD	CHOL
ENSG00000255310	ENST00000530248	MSRB1	ENSG00000198736	ENST00000399753	-0.1862	905	LUAD	CHOL
ENSG00000255310	ENST00000530248	MSRB1	ENSG00000198736	ENST00000564908	-0.2305	1117	LUAD	CHOL
ENSG00000255310	ENST00000530248	CHCHD10	ENSG00000250479	ENST00000520222	-0.1130	89	-	CHOL
ENSG00000255310	ENST00000530248	CHCHD10	ENSG00000250479	ENST00000401675	-0.1078	130	-	CHOL
ENSG00000255310	ENST00000530248	CHCHD10	ENSG00000250479	ENST00000484558	-0.1078	130	-	CHOL
ENSG00000255310	ENST00000530248	CHCHD10	ENSG00000250479	ENST00000517886	-0.1522	54	-	CHOL

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lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000255310.2	ENST00000530248.2	96	64	354

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential