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lncRNA: ENSG00000253844 |
Summary for RP11-546K22.1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000253844 | Gene symbol | RP11-546K22.1 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-546K22.1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000253844 | 6.728093e+01 | -1.533122e+00 | 1.771742e-01 | -8.653187e+00 | 5.010000e-18 | 2.690000e-17 | DOWN | KIRC |
| ENSG00000253844 | 7.588943e+01 | -1.216366e+00 | 4.265571e-01 | -2.851589e+00 | 4.350124e-03 | 9.319476e-03 | DOWN | KICH |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000253844 | -4.396948e-01 | 1.623999e-05 | KICH | 3.364893e-05 |
| ENSG00000253844 | -3.088014e-01 | 6.709994e-15 | KIRC | 2.720268e-14 |
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lncRNA-Protein interaction for RP11-546K22.1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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