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lncRNA: ENSG00000250786 |
Summary for SNHG18 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000250786 | Gene symbol | SNHG18 |
| Gene name | small nucleolar RNA host gene 18 | |
| HGNC | 49007 | |
| Entrez ID | 100505806 | |
| Gene type | lincRNA | |
| Synonyms | 05p15.31|SNHG18 | |
| UniProtAcc |
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Structure and expression level for SNHG18 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000250786 | 3.353622e+02 | 1.823814e+00 | 5.495649e-01 | 3.318651e+00 | 9.045340e-04 | 3.453393e-03 | UP | GBM |
| ENSG00000250786 | 3.229250e+02 | -1.069119e+00 | 3.368631e-01 | -3.173750e+00 | 1.504834e-03 | 3.516956e-03 | DOWN | KICH |
| ENSG00000250786 | 4.872488e+02 | -1.295368e+00 | 1.861597e-01 | -6.958370e+00 | 3.440000e-12 | 3.180000e-11 | DOWN | PRAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000250786 | 3.459472e-01 | 1.992455e-02 | CHOL | 2.170537e-02 |
| ENSG00000250786 | -5.871894e-01 | 1.464988e-09 | KICH | 1.124553e-08 |
| ENSG00000250786 | -3.609795e-01 | 2.115581e-18 | PRAD | 3.581898e-17 |
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lncRNA-Protein interaction for SNHG18 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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