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lncRNA: ENSG00000250266 |
Summary for LINC01612 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000250266 | Gene symbol | LINC01612 |
| Gene name | long intergenic non-protein coding RNA 1612 | |
| HGNC | 51837 | |
| Entrez ID | 101928223 | |
| Gene type | lincRNA | |
| Synonyms | RP11-789C1.1|LINC01612|04q33 | |
| UniProtAcc |
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Structure and expression level for LINC01612 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000250266 | 4.724084e+01 | -2.894231e+00 | 9.167033e-01 | -3.157217e+00 | 1.592828e-03 | 5.229339e-03 | DOWN | CHOL |
| ENSG00000250266 | 1.636719e+02 | 1.077646e+00 | 2.828873e-01 | 3.809454e+00 | 1.392740e-04 | 3.879360e-04 | UP | KICH |
| ENSG00000250266 | 2.669556e+01 | -1.226317e+00 | 3.336560e-01 | -3.675394e+00 | 2.374830e-04 | 5.571360e-04 | DOWN | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01612 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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