 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | FKBP8,ARL16,UXT,SLIRP,TCEA2,ARFIP2,THAP4,KRT10,ABHD17A,BLVRB,IFT22,C12orf57,POLD2,CIRBP,NUDT18,PSMB7,PET100,MZF1,MCEE,ATP5MG,WDR83OS,C1orf56,SHARPIN,DPM2,QPCTL,HMCES,PPP2R3B,BCS1L,TRUB2,HINT2,CTU1,ACD,RPS27A,DPP7,MDH2,MRPL46,TIMM17B,B3GAT3,MRPS12,PIGP,NDUFB9,NDUFA11,RPL26L1,METTL5,SNRPA,SMUG1,TRAPPC2L,HIRIP3,CCNQ,FAAP20,FAM229B,C6orf136,COMMD7,COA3,SURF2,EIF3G,PMM1,NDUFA3,PPIH,RECQL4,COA4,CDK2AP2,SLC2A11,SVBP,SPRN,MICOS13,TAZ,SUGP1,NAA80,FAM104B,NDUFB2,UQCR11,BRICD5,PSMD13,GTF2H5,USE1,ECHDC2,GLRX5,CYB5D2,RCCD1,BNIP1,TMEM208,RAB4B,ILKAP,VKORC1,LYRM4,MPLKIP,RING1,PSENEN,SSU72,CHKB,CBY1,ABHD14B,WDR83,USF1,C3orf18,ANKRD39,DHPS,MPST,MRPS11,BABAM1,ACYP1,MRPL14,RPS28,MON1A,PIH1D1,CDKN2AIPNL,B3GALT6,DDX49,C19orf48,PFDN6,MFSD3,INO80E,RBM42,ATP5MK,C3orf62,CSNK2B,YJU2,NOC4L,TMEM101,ALKBH2,RPL35,NDUFA2,ZBED8,BORCS6,TMEM160,PARL,FDX2,C18orf21,C22orf39,CYBA,COQ6,FUZ,ESS2,TOP1MT,PIGZ,PSMB3,MTLN,MRPS2,GCAT,TSEN54,ZNF593,CENPM,MRPL57,KIF9,FAM229A,PFDN5,CCS,COX6C,DUS3L,CCDC167,HMGN3,FAM193B,SLC25A39,NDUFB1,NOL3,SLC25A28,CZIB,RABL6,MPG,SPCS1,PDRG1,ELOF1,RPA3,HEXD,COA6,SDHAF2,EEFSEC,RPL23A,IDH3B,PMVK,ANAPC11,SCNN1D,CCDC24,MRPS25,RRP7A,CCDC12,EIF3K,ILVBL,PTRHD1,FDXR,DECR2,ATPAF1,THOC7,COX7A2,ERCC5,CLTB,DDT,MCRIP1,SDF2L1,CYB561D2,PCYT2,TRIR,JMJD4,MRPL52,SCNM1,OARD1,PRADC1,MMAB,RTRAF,SLC27A5,NDUFB3,GLI4,DNAJC4,MRPL55,EMG1,HMGCL,CCDC28B,MED7,NMRAL1,NDUFB8,SH2B1,SSR4,COX6B1,SNRNP25,FAM98C,NFU1,NICN1,TECR,PNPLA4,COX5A,TMEM14B,PPOX,BOP1,SWI5,NDUFB11,MALSU1,IFTAP,RPL23,FAHD2B,AK1,C19orf53,FNDC10,COX16,GUK1,EIF2B4,MRPL28,TIMM44,HSCB,ADPRM,MIX23,HPF1,PFDN2,RPL13A,ACYP2,RPL37A,LSM3,SURF1,NUBP2,PTGES2,GNPTG,LCMT1,NUTF2,C6orf52,ACBD6,CISD1,IZUMO4,FIS1,BRI3,GTPBP6,IMP4,MRPL24,P2RY11,SPACA9,DUS2,MRM1,STYXL1,NECAB3,MAN1B1,SMPD2,UBL7,HDAC11,CHCHD2,NPDC1,NAA38,POLR3K,JTB,MRPS24,TBL3,TBCA,TCTA,CWC15,CCDC106,CCDC137,CPSF4,EMD,LAS1L,NAA10,FBXO44,NELFE,DOHH,RMND5B,METTL23,EXD3,TMEM120A,STX8,NHP2,TUSC2,MVB12A,ELP5,PGP,CHMP2A,SYCE1L,BRMS1,BRF1,PPP1R3F,PRR7,THOC6,DNAJC19,PQBP1,PTTG1,LENG1,TMEM186,MRPS23,DENND6B,PEX11G,CCHCR1,PRMT7,ZFYVE19,IFI27L2,REXO4,PTRH2,SGF29,NEK8,CETN3,POLR2L,SERF2,RPS10,VPS28,BCL7B,COMMD1,TRPT1,EIF3B,TATDN2,EBP,TM7SF2,MRPL36,VPS4A,NIT1,MRPS9,HEMK1,ROGDI,RABEP2,PTOV1,PCSK4,ALKBH4,DMAC1,PYURF,NDUFA12,GSTO1,FBXL8,WDR54,SPC24,AP4M1,HMBS,FRG1,KRTCAP2,KHDC1,IDUA,TMEM134,PRMT1,POP5,ORAI3,NTHL1,MYL5,UBXN6,SOD1,CUEDC2,UBAC1,METTL26,SCAND1,COX14,PPP1R14B,NDUFA6,UBXN11,HSPBP1,HAGH,PTCD1,NDUFAF2,B9D1,DDX41,PPCDC,ISOC2,S100A13,RSAD1,USF2,NCAPH2,AKR7A2,RP9,COPRS,RALY,TRIOBP,JOSD2,CCDC51,AMZ2,TMEM187,SPAG7,C19orf81,NOSIP,MVD,ENKD1,FAM3A,ATP5IF1,IDH3G,BLOC1S1,TBRG4,DUT,C11orf1,NDUFS6,PYM1,NUDT1,ATP5F1E,AP2S1,ZBTB8OS,NUDC,TRMU,MYPOP,CCDC107,MRPL34,NFKBIB,PSMA2,SEM1,STMP1,TIGD5,CDPF1,UBE2J2,NAT14,DNPH1,C1orf35,MTIF3,NDUFA7,NME5,BUD23,NPRL2,ZCWPW1,MRPL2,COQ3,KLHDC4,VAMP8,GFER,UQCRB,TIMM9,HHLA3,MIEN1,LSM5,H2AJ,BCAT2,UQCRH,TP53I13,SEC61B,KYAT1,COPS9,ZMAT5,STX10,KAT2A,ECI1,ARMC5,ACBD4,PMF1-BGLAP,SNU13,LRRC23,TMEM223,TIGD6,PLA2G6,TMEM86B,COMTD1,NDUFB5,UQCRC1,RPL36AL,SLC25A10,ENDOV,COPE,DPY30,FAM207A,BSG,PPIE,MRPL11,SLC2A8,FAM50A,ITPA,BAD,FAM162A,ELP6,COX7B,ALKBH7,TMEM258,MRPL22,MYL6,GEMIN7,GEMIN6,C9orf116,TXN,MZT2B,PHF1,CETN2,APOO,ABHD11,HDAC10,HAUS7,CHADL,SCRN2,HSF4,ANKS3,ATRAID,NOXA1,GON7,UCK1,SMDT1,PIGQ,SEC61G,ANKRD54,TXNRD2,RASSF7,RAD51C,LAMTOR1,RNF25,COX4I1,TMEM60,NFKBIL1,ECSIT,ARF5,SAC3D1,DYRK4,CENPS,MESP1,RPS6,NR2C2AP,MZT2A,PSMG4,HDHD5,EIF2B3,SFXN4,ARFRP1,CIAO2B,MCRIP2,MAGIX,IFI27L1,BRAT1,AAMDC,PELP1,PSMG3,MRPL27,NOL7,UQCR10,C19orf25,ARPC4,MYG1,ABHD10,ZMYND19,ERCC1,RNF215,PSMB1,TLE5,NAT9,NDUFA5,ABHD14A,LSM2,TPGS1,TRMT61A,COA5,SUCLG1,PPAN,C14orf93,COQ9,DPH7,SSBP1,RNF126,CKLF,ATP5F1D,SMARCD3,ATP5PF,RPS13,FUNDC2,MRPL43,APRT,CEP131,TOMM7,DHRS4,XPA,CD320,ECHS1,RUVBL2,EIF3I,NOP53,SMIM19,FKBP2,IMMP1L,HSD17B10,SSR2,NDUFB10,RPS17,TPRA1,CHCHD4,SDSL,DDRGK1,PRDX5,GEMIN8,BOLA3,UBA52,C15orf61,RPS29,DNAJC30,CYCS,TMEM115,MRPS26,HDDC3,IRF3,GPANK1,SERGEF,NDUFA13,CHCHD5,RIBC1,C7orf50,C1orf122,DCTN3,C16orf86,NDUFAB1,RRNAD1,GADD45GIP1,SNRPD2,ZSWIM7,HRAS,HSBP1,RP11-523H20.5,REEP2,HSD17B8,NDUFAF6,ATAD3B,ZNHIT2,OSCP1,TTC1,NDUFA4,BANF1,BCL7C,SLC25A1,TMEM9,RPL27,PDZD11,TCEA3,CINP,GSTZ1,HAX1,IFT27,ZNHIT1,NARF,PMF1,TIMM10,BUD31,EMC3,POLR2J,PPP1R16A,SS18L2,SWSAP1,RFXANK,NT5C3B,CENPT,UROS,ATP6V0E2,CFAP410,MRTO4,NUDT2,DBP,C1orf50,DNAJB2,APOM,UFD1,C20orf27,COX17,ATP5MJ,ATP6V1F,RABAC1,GET3,UBL5,TXNDC17,RPS8,RPS11,GAMT,CXXC1,PLEKHJ1,C8orf82,PARD6A,TMEM129,GPATCH3,NDUFB7,NSUN5,ELOC,DGAT1,UBXN1,MRPS33,THYN1,LIAS,PGLS,CKB,PRAF2,PEX16,ETFB,TMEM107,TEDC1,LRRC29,FAM228B,STOML1,WASHC1,CHCHD10,TIGD1,NDUFC1,RPL36A,COA8,PCBP4,THAP3,NOL12,MTFR1L,SPIN2B,VEGFB,MOSPD3,LYRM1,OAZ1,PYCR3,MOB2,NDUFA8,COMMD6,SPATA33,RPS24,NDUFB6,C12orf73,TIMM29,EIF2D,TMA7,LMAN2,EMC9,PAM16,MACROD1,YBEY,CNFN,POMZP3,TPRKB,SPATA24,PSMC5,NEDD8,DUSP28,BOLA1,PXMP2,TSR3,RPS19BP1,SMIM4,YPEL3,SAP30BP,RNASEH2C,TMEM11,NSMCE1,PIN1,GALK1,ATP5MC2,RHBDD3,TMEM238,NMRK1,NDUFV3,DGCR6L,PMPCA,SPSB2,REX1BD,TFPT,HSD11B1L,FASTK,CYHR1,SIRT6,ZNRD2,DXO,HSPB11,NR1H2,TRAPPC2,HINT1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | ANKRD39,MRPL4,YDJC,TBL3,DGAT1,RPS23,THOP1,ABHD11,NUDC,ATP6V1F,DHPS,PEX11G,PSMB3,COX16,CCDC167,PGLS,EIF2D,ENDOG,OXLD1,C3orf18,UBXN1,PARK7,TRMU,PQBP1,CUEDC2,HEMK1,GPATCH3,ELOF1,EIF3G,TMEM9,PSMB4,E4F1,FKBP8,BCAT2,PSMB6,UBXN6,DYRK4,TAZ,TIGD6,C2orf81,FKBPL,IZUMO4,PIH1D1,ATRAID,ECHS1,ITPA,COX6A1,MRPS36,NFU1,ALKBH4,PRR7,NDUFB1,B4GALT7,SHFM1,TMEM160,VAMP8,OSCP1,TIMM17B,VPS28,TUSC2,CAMLG,LAMTOR4,PSMD4,C14orf79,CDC34,ATP6V0E2,COQ3,MZF1,LSM2,HINT2,OCEL1,C3orf62,C6orf203,GADD45G,BANF1,QTRT1,RPSA,MYL5,C14orf2,HSCB,MANBAL,NDUFB11,RBM42,PPCDC,NT5M,CCDC137,CLTB,NT5C,ELAC1,SAT2,NDUFS5,MACROD1,THOC6,SCNM1,S100A13,RRP7A,RPL35,TRIOBP,PTCD1,WDR13,HCFC1R1,APOM,BABAM1,AMZ2,ARIH2OS,C16orf91,USMG5,SLC25A10,ATP5I,RPS27,COX4I2,NMRAL1,CIRBP,UBA52 | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| Only predicted by TDF | | KIDINS220,ATXN1L,RAB6A,NUP98,KDM5A,SOCS5,LRP1,SMARCC2,RP2,ACLY,SETD7,SMARCA5,XPO4,SF3A1,REST,ITCH,NCOA6,RIN2,KIF16B,GCN1,PPP1R9B,USP32,ATF1,DDX52,MOB1A,RAB3GAP1,MYOF,GGCX,ARF6,RAB10,KPNA6,ITPRIPL2,EIF4G2,AGO4,CPSF2,ASCC1,STAU1,SEC23IP,AGO1,MCMBP,KAT5,SEC31A,UHRF1BP1,EVI5,TMEM131,STAT6,NEK7,PLBD2,PFAS,RAPGEF1,CSNK1A1,KIF5B,TAB2,TNFRSF10A,TRAPPC10,DNMT1,CLASP1,FNDC3B,COPA,WNK1,GIT2,DHX15,SLC25A24,NRAS,MAML2,ELF1,TGFBRAP1,KDM4A,MED1,RBMS2,CSDE1,RLIM,PATL1,WDR43,HECA,RB1,FLII,SEC22B | | Exist in public source | | NA |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | DIP2B,KDM4A,TEAD3,B4GALT5,HEATR1,EVI5,ARID1A,KRAS,UTP20,HCFC1,RNF123,PTPRK,AIDA,UHMK1,BECN1,RDX,SMARCC2,DSE,SMCR8,PPP1R12A,GNL3L,TRIP11,CAD,RNF213,TTYH3,ITPR2,EIF4G1,NEDD1,FCHO2,CREBBP,PPP1R9B,PBRM1,CAMK2D,VPS13B,E2F3,ZFYVE26,SNX9,MRPL19,TDG,CELF2,ATP11B,PRRC2C,PHF3,LYN,PAK2,TMEM127,ARID1B,STRN,SLFN5,EPS8,PTPRE,PHF20,KIDINS220,CYLD,PTBP3,GTF2H3,RNF31,BTBD10,FBXO11,DDX6,SEC23A,MINK1,MMP14,TLN1,MFSD9,ITSN2,SLTM,RAB35,KLF13,SMAD1,ABHD2,WIPF2,TM9SF1,POGK,AGFG1,SEC22B,GPD2,PARP14,ZFAND3,FBXW8,SRFBP1,SGPL1,APOL6,UBE4B,TP53BP2,PRR12,BRPF3,YAP1,CAND1,MYSM1,FOXN3,UVRAG,DHX37,OSBPL8,FBH1,RLIM,KDM2A,ACTR2,FBXW2,ANKRD52,DCAF7,FRMD8,RBM7,TRAM2,GAB2,TUT7,MED1,GTF2I,TGOLN2,HBP1,EIF4G2,CLASP1,ARAP1,GON4L,KIF1B,CAB39,HUWE1,SMG8,MIS18BP1,TEP1,YME1L1,BACH1,DDX42,SMARCA5,SH3PXD2B,ARFGEF1,NOTCH2,EIF2AK2,FNDC3B,ARCN1,ATF1,ANKLE2,LATS1,SPOPL,POLG,SRPK1,MYD88,RAPGEF1,RBMS2,TMEM87B,SLC36A1,SLC30A6,SH2B3,VPS4B,SUSD6,NAF1,DUSP16,MLXIP,WDR82,FOXJ3,EDC4,CHSY1,NPEPPS,ZSWIM4,BZW1,SPTY2D1,SLAIN2,ARIH1,PUM1,SEC24B,FLII,TGFBR2,KCTD10,ETV6,KMT2D,ZDHHC20,TRAPPC8,FUBP1,N4BP1,ANKRD27,FBXO21,MAPK14,ETV3,RNF111,TP53BP1,ZDHHC5,USP32,VCL,G3BP1,GIGYF2,LLGL1,PSME4,STAT3,ITPR3,AGO1,SLC25A24,DNMT1,POLR1A,GALNT2,LUZP1,AFF4,DDX3X,CRIM1,NIPBL,ASXL2,PHF8,RSF1,USP47,POLR2B,BAZ2A,PIKFYVE,MYOF,ZCCHC2,TPM4,MTDH,RAB18,GNPTAB,DNAJC13,MED13,STAT6,GSPT1,TMEM131,EP400,XRN1,NFKB1,SMG6,SPRING1,ADNP2,SKI,NUP98,BMPR2,MSN,PLBD2,TRIP12,TM9SF4,GTF2A1,TFIP11,GGCX,UBE2G1,SOS1,CSNK1A1,SETD7,AKAP13,ELF1,SUFU,UGGT1,TAF2,GCC2,CAST,STAG1,WDR3,FEM1B,TNFRSF10A,THOC2,SAMD4B,MPRIP,HAUS2,CCNK,CTDSP2,SRCAP,ZDHHC7,SCAF11,CNOT1,MMS19,SLC35E1,CBL,TSTD2,MYH9,FCF1,EIF4G3,SH3PXD2A,AREL1,ATXN1L,UBR1,SEPTIN10,ACTR3,PCDHGC3,AMMECR1L,NOP9,CHD8,PIP4K2C,MED14,KAT5,ADAM10,KIAA0100,BAZ2B,SPRED1,ARHGAP21,UBE4A,ERBIN,DNAJC14,ATL2,CAP1,KIF16B,WASF2,MACF1,SH3GLB1,DHX8,PPRC1,ILK,HEG1,EIF4EBP2,ATF7IP,OTUD4,DYNC1I2,DOCK7,IREB2,SEPTIN11,CLIP1,SART3,API5,SEL1L,RAI1,NCOA2,RC3H2,UBE3B,SNAP23,PRKDC,ROCK1,MAPK1,RNF169,UBR5,WDR81,FAM168A,TBC1D2B,RNF24,GNS,LARP4,USP9X,ROCK2,NUP62,WDFY1,UEVLD,HECA,NOTCH3,RTCA,TGFBRAP1,RREB1,UHRF1BP1,COG5,SSH1,RP2,MAN2B1,PFAS,KLHL5,SP1,KPNA3,ASAP1,MTF1,SRPRA,AQR,DPAGT1,HYOU1,NFAT5,STAT2,REST,PLS1,KDM2B,THRAP3,YTHDF3,TMOD3,BACE1,RANBP2,ACTN4,ELK3,MYH10,CARM1,PICALM,AGO2,GOLPH3,STK4,CPSF2,GNA12,GLYR1,C5orf22,ZNFX1,VPS13C,DHX36,USP38,BAZ1A,CREB1,PLEKHG1,KPNB1,GSK3B,TUBA1B,QKI,GNPNAT1,EXOC5,AEBP2,RNF4,NT5C2,YLPM1,RALGAPB,BARD1,HIPK1,KPNA6,SNX6,TM9SF2,TRAPPC10,LATS2,WDR43,CEP104,CLOCK,PTPN11,TET3,AP1G1,ZNF17,SPAST,EXOC2,POLR2A,ANKFY1,ZNHIT6,FGD6,DNAJC11,CLTC,ATRN,CTNND1,NCOA1,CIC,ATP2A2,SOCS5,SON,PAIP1,CSDE1,RAB31,M6PR,APAF1,GBF1,ASCC1,CDYL,PREX1,SLC25A43,PCNX1,GCN1,UBR4,CDH11,IQGAP1,ITGAV,CDC42SE1,SNTB2,GSTCD,KLF7,CRKL,BPTF,STK24,SKIL,SDE2,SFXN3,INO80,TJP1,MFSD14A,MOB1A,COPB2,SF3B1,NIPA2,TEAD1,SCARB2,PDLIM5,DDX52,VEZT,DYNC1LI2,MIDEAS,RASA1,DNAJC3,SF3A1,SEPTIN2,ADAM9,DDB1,BCL9L,ABHD5,IGF2R,FAM120B,SYNJ1,RCC2,ERC1,TNPO1,PPP4R1,ACLY,NEK7,SPTLC1,FAM160B1,RO60,YES1,CAPN1,HEATR5B,LEPROT,SEC31A,CYFIP1,ZNF28,ANO6,LRP1,ARL5A,TMEM184C,TOP1,DENND5A,SYNRG,SLC30A7,PDS5A,MIA3,AFAP1,AHNAK,AP5B1,MCFD2,ARHGAP18,TAB3 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000250222 | ENST00000508877 | exon_skip_421737 | chr4:3428557-3428711 | -12.83 | -0.1116 | RGS12 | ENST00000336727,ENST00000344733 | Frame-shift |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000250222 | ENST00000508877 | exon_skip_148110 | chr17:4892401-4892512 | -15.83 | -0.1615 | MINK1 | ENST00000355280 | In-frame | | ENSG00000250222 | ENST00000508877 | exon_skip_324294 | chr2:27774423-27774530 | -11.61 | -0.1968 | MRPL33 | ENST00000296102 | Frame-shift | | ENSG00000250222 | ENST00000508877 | exon_skip_353954 | chr20:63875815-63875875 | -5.80 | -0.1234 | TPD52L2 | ENST00000346249 | In-frame | | ENSG00000250222 | ENST00000514487 | exon_skip_326741 | chr2:73946718-73946906 | -15.74 | -0.1220 | DGUOK | ENST00000264093 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000250222.1 | ENST00000514487.1 | 73 | 63 | 284 | | ENSG00000250222.1 | ENST00000508877.1 | 63 | 189 | 1 |
|
