|
||||||
|
lncRNA: ENSG00000249307 |
Summary for LINC01088 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000249307 | Gene symbol | LINC01088 |
| Gene name | long intergenic non-protein coding RNA 1088 | |
| HGNC | 49148 | |
| Entrez ID | 100505875 | |
| Gene type | antisense | |
| Synonyms | 04q21.21|LINC01088 | |
| UniProtAcc |
Top |
Structure and expression level for LINC01088 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000249307 | 7.656490e+02 | 3.962285e+00 | 8.710639e-01 | 4.548788e+00 | 5.400000e-06 | 3.690000e-05 | UP | GBM |
| ENSG00000249307 | 1.100954e+03 | 1.674425e+00 | 2.808210e-01 | 5.962607e+00 | 2.480000e-09 | 1.560000e-08 | UP | PRAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
Top |
lncRNA-Protein interaction for LINC01088 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
