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lncRNA: ENSG00000249116 |
Summary for IRX4-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000249116 | Gene symbol | IRX4-AS1 |
| Gene name | IRX4 antisense RNA 1 | |
| HGNC | 40305 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | 05p15.33|IRX4-AS1|CTD-2194D22.3 | |
| UniProtAcc |
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Structure and expression level for IRX4-AS1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000249116 | 3.448940e+01 | 7.605080e+00 | 2.062431e+00 | 3.687435e+00 | 2.265260e-04 | 2.390126e-03 | UP | CESC |
| ENSG00000249116 | 7.546920e+01 | 1.635908e+00 | 1.762298e-01 | 9.282811e+00 | 1.650000e-20 | 4.510000e-19 | UP | PRAD |
| ENSG00000249116 | 2.543344e+01 | 7.416895e+00 | 4.695479e-01 | 1.579582e+01 | 3.320000e-56 | 1.010000e-54 | UP | LUSC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000249116 | 3.171121e-01 | 2.450818e-14 | PRAD | 1.593843e-13 |
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lncRNA-Protein interaction for IRX4-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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