|
||||||
|
lncRNA: ENSG00000249007 |
Summary for RP11-510N19.5 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000249007 | Gene symbol | RP11-510N19.5 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | sense_intronic | |
| Synonyms | ||
| UniProtAcc |
Top |
Structure and expression level for RP11-510N19.5 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000249007 | 1.202792e+02 | 2.649066e+00 | 5.832175e-01 | 4.542159e+00 | 5.570000e-06 | 3.170000e-05 | UP | CHOL |
| ENSG00000249007 | 2.188229e+02 | 3.607331e+00 | 9.239665e-01 | 3.904179e+00 | 9.450000e-05 | 1.156322e-03 | UP | CESC |
| ENSG00000249007 | 1.262475e+02 | 2.030224e+00 | 3.010605e-01 | 6.743575e+00 | 1.550000e-11 | 1.390000e-10 | UP | KIRP |
| ENSG00000249007 | 1.120275e+02 | 1.335742e+00 | 2.727968e-01 | 4.896474e+00 | 9.760000e-07 | 4.090000e-06 | UP | UCEC |
| ENSG00000249007 | 9.114396e+01 | 1.021807e+00 | 2.490199e-01 | 4.103314e+00 | 4.070000e-05 | 9.340000e-05 | UP | LUSC |
| ENSG00000249007 | 7.722022e+01 | 1.201717e+00 | 1.706566e-01 | 7.041725e+00 | 1.900000e-12 | 8.270000e-12 | UP | BRCA |
| ENSG00000249007 | 1.543339e+02 | 1.998699e+00 | 2.021460e-01 | 9.887404e+00 | 4.720000e-23 | 5.970000e-22 | UP | LUAD |
| ENSG00000249007 | 1.554974e+02 | 1.544703e+00 | 1.906042e-01 | 8.104244e+00 | 5.310000e-16 | 5.230000e-15 | UP | COAD |
| ENSG00000249007 | 1.566669e+02 | 1.814081e+00 | 2.475235e-01 | 7.328923e+00 | 2.320000e-13 | 5.230000e-12 | UP | STAD |
| ENSG00000249007 | 1.911380e+02 | 2.211498e+00 | 3.966156e-01 | 5.575923e+00 | 2.460000e-08 | 4.630000e-07 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000249007 | 4.449078e-01 | 2.197090e-03 | CHOL | 3.270359e-03 |
Top |
lncRNA-Protein interaction for RP11-510N19.5 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
