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lncRNA: ENSG00000248554 |
Summary for C5orf34-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000248554 | Gene symbol | C5orf34-AS1 |
| Gene name | C5orf34 antisense RNA 1 | |
| HGNC | 41061 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | RP11-159F24.6|C5orf34-AS1|05p12 | |
| UniProtAcc |
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Structure and expression level for C5orf34-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000248554 | 5.141522e+01 | 3.362669e+00 | 1.002972e+00 | 3.352706e+00 | 8.002560e-04 | 6.628281e-03 | UP | CESC |
| ENSG00000248554 | 8.498703e+01 | 3.349104e+00 | 1.966393e-01 | 1.703171e+01 | 4.780000e-65 | 7.450000e-62 | UP | HNSC |
| ENSG00000248554 | 7.079494e+01 | 4.315311e+00 | 2.494653e-01 | 1.729824e+01 | 4.850000e-67 | 2.090000e-65 | UP | LUSC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for C5orf34-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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