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lncRNA: ENSG00000242207 |
Summary for HOXB-AS4 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000242207 | Gene symbol | HOXB-AS4 |
| Gene name | HOXB cluster antisense RNA 4 | |
| HGNC | 40285 | |
| Entrez ID | 100874351 | |
| Gene type | antisense | |
| Synonyms | 17q21.32|HOXB-AS4 | |
| UniProtAcc |
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Structure and expression level for HOXB-AS4 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000242207 | 5.473024e+01 | 1.629753e+00 | 2.877517e-01 | 5.663749e+00 | 1.480000e-08 | 8.670000e-08 | UP | KIRP |
| ENSG00000242207 | 6.587845e+01 | 2.352285e+00 | 3.477035e-01 | 6.765204e+00 | 1.330000e-11 | 2.200000e-10 | UP | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for HOXB-AS4 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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