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Center for Computational Systems Medicine
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lncRNA summary

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lncRNA structure and expression level

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lncRNA-Protein interaction

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lncRNA-DNA interaction

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lncRNA-RNA interaction

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Variants in lncRNA

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lncRNAs regulate the target genes through functioning as enhancers

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lncRNAs regulate the target genes through recruiting transcript factors

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lncRNAs regulate the alternative splicing events through interacting with splicing factor

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lncRNAs regulate mRNA through targeting the 3'-UTR region

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lncRNAs regulate mRNA by competing with miRNA

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lncRNA coding potential

lncRNA: ENSG00000238018

Summary for AC093110.3

check button Gene summary

Gene informationEnsembl ID

ENSG00000238018

Gene symbol

AC093110.3

Gene name
HGNC
Entrez ID
Gene typeantisense
Synonyms
UniProtAcc

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Structure and expression level for AC093110.3

check buttonDifferentially expressed gene analysis between cancer and normal samples.
DEG result
Ensembl IDBase meanlog2FC(AD/control)lfcSEStatP-valueAdjc.p-valueDEG direction Cancer type
ENSG000002380186.899030e+011.349939e+001.373297e-019.829913e+008.370000e-235.860000e-22UPKIRC
ENSG000002380189.605325e+01-3.795487e+001.536347e-01-2.470463e+019.540000e-1351.920000e-132DOWNLUSC
ENSG000002380181.184563e+02-3.218882e+001.650358e-01-1.950415e+011.010000e-842.600000e-82DOWNLUAD

check buttonCorrelation between lncRNAs and cancer stages.
LncRNA Ensembl IDCorrelationP-valueCancer TypeAdjc.p-value
ENSG00000238018-3.806234e-011.220525e-21LUAD1.244936e-19
ENSG00000238018-3.313975e-011.734280e-15LUSC9.957658e-14

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lncRNA-Protein interaction for AC093110.3

lncrna_protein
check buttonlncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

check buttonlncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).
LncRNA Ensembl IDLncRNA ENST IDLncRNA NameProtein Ensembl IDProtein NameCatRAPID ScoreLncpro ScoreUniPortIDGene SubtypePublic source

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lncRNA-DNA interaction for AC093110.3

lncrna_DNA
check buttonlncRNA targets the enhancer region and positively regulates the gene expression.
Only predicted by TDF
FRMD4B,SPAG9,REPS1,MGAT4A,CPLANE1,PUM1,MFSD8,SH3D19,DNAJC27,BRD1,MZF1,PDE5A,TTC31,LYSMD4,DCP1A,VAMP4,N4BP2L2,DMTF1,UNKL,PIGG,UBE4A,VMP1,KAT6A,KLHL28,MSANTD2,CCDC14,MYO9A,ARAP2,CLK4,SETD2,TTC14,CREB1,GPRIN3,PPIP5K2,SMAD2,SCYL3,CLCN6,OGT,ARIH1,C20orf194,SH3RF1,RNF19A,ARID4B,ASH1L,POLG2,FEM1C,PTAR1,TUT4,CPSF7,PARP4,THOC2,CTC1,CLK1,ATXN7,OFD1,PEAK1,FBXO38,RFX7,HCFC2,FOXJ3,PURA,XPNPEP3,RSRC2,TTC21B,NPAT,NAA25,EML4,SETD5,ZFP62,GON4L,MDN1,SOCS4,CHD9,BRAF,YTHDC1,AGO3,SECISBP2L,ORC2,OSBPL3,NFKBIZ,SBNO1,PHC3,ZZEF1,ABHD16A,SUPT20H,CCDC191,TAOK3,ANKRD28,NR2C2,TASOR,ARHGAP44,PKN2,CDK17,PIK3C2B,GLS,ATG2B,ZFC3H1,MBTD1,DMAC2L,SP3,ARHGEF7,DDX42,CCNT1,HIPK1,CEP192,EIF4A1,PIK3C2A,PAFAH1B1,VPS13A,ATF7IP,FMNL3,MEF2D,SWT1,LTN1,HERC4,RNF214,AMMECR1L,ATM,TTC17,CDK13,DPY19L3,SMG7,LENG8,KLF7,TRAF6,CEP57,FGD4,PPWD1,MLLT6,CLASP1,INO80D,NHLRC3,ICE2,SH3YL1,CASP2,FAM111A,USP53,WDR59,ZNF25,OTUD7B,UBA6,UBR1,WAPL,PHF12,DENND6A,ODR4,ZMYM5,UBR4,SNRNP48,RC3H1,CBLB,XPO4,SETX,ZNF44,ARHGEF38,SMG1,LYSMD3,RIMKLB,BCLAF3,APBB2,DNAJB14,PUS7L,CEP83,GGNBP2,MYO5C,ATP11A,EP400,UACA,DOCK6,UBN2,ERCC6L2,LRIG2,FBXO3,ABHD18,SESTD1,NEMF,REV3L,SMCHD1,MECP2,AFDN,SMYD4,NBPF11,CYP4V2,DGKE,ENOSF1,TAOK2,USP6NL,PAXBP1,EPS15,GANC,TMOD2,FNBP4,KMT2D,SYNRG,BOD1L1,PLEKHA8,RSRP1,TMF1,SSH2,MLLT10,CHD2,TSTD2,FLCN,MED23,ATG14,GOLGB1,FOXP1,NBPF15,ERN1,OTUD4,SPTAN1,ZNF720,MIER3,HERC1,BTBD7,ROCK2,ADAMTSL4,SCAF11,PUS10,ARHGAP32,ZSWIM8,GK5,NOL4L,RBM6,TRMT13,SPRED2,PDS5B,ARHGAP12,ARID4A,SBF2,NT5C2,RNF115,SMAD4,SYNE2,TGOLN2,TYW1,CHD1,WDR27,HECTD4,ANKFY1,KHDC4,TPR,DISP1,MIDEAS,HPS4,PNISR,TMEM63A,CEPT1,USP45,CARD8,DMXL2,ATAD2B,EVI5,NCOA2,FAM126B,ATAT1,ESCO1,RALGAPA1,CDC42BPA,WDR11,ROCK1,MYSM1,MED13L,SMG6,STAM2,VPS13B,TAF1D,KATNBL1,PLEKHH1,TET3,BNIP2,RNPC3,ANKRD10,RPS6KB1,UBXN7,SON,DOP1A,KIAA2026,KANSL3,KMT2C,DENND4A,KLF6,CCNT2,PTCD3,MAGI1,ZNF91,CHD6,AGO2,BRWD1,NAPEPLD,ATG16L1,PCSK7,RBM25,MLH3,KANSL1L,POLI,AGFG1,UBR5,PRPF39,ITSN2,RESF1,KIAA0753,WDFY3,ATP8A1,SMC5,SRRM2,HEATR5B,ZNF106,BTN2A1,EPC1,LCOR,PANK3,DDHD1,MAP4K5,CENPC,RBM41,ARGLU1,LIG4,CCNL1,TLK1,C2orf49,POLK,CELF1,TMEM161B,EPG5,MICALL2,TBC1D2B,FAM149B1,FAM160A2,TIA1,RANBP10,ZNF83,MOSMO,KANSL1,ZNF8,ABCD4,SYNJ1,BMPR2,ERCC3,SZT2,STX17,PARP8,HELZ,ARFGEF1,CRAMP1,PNN,MICAL3,CDC14B,NOSTRIN,CCAR1,UBE2V1,ARHGAP5,ARL5B,SNX13,POU6F1,MAPKAPK5,KMT2A,TPP2,REV1,NR2C1,STX2,DYNC1LI2,SOS1,RUFY2,RBM33,PAG1,AVL9,LRCH4,AGAP6,GABPB2,CPEB2,TRIM66,RBM39,GPATCH8,PDZD8,ZCCHC8,ERICH1,WASHC4,INTS3,FNDC3A,PIGL,ZC3H7A,EFCAB14,BAZ2A,MAP3K2,MAML2,DCAF8,PHYKPL,SF3B1,NHLRC2,ANKIB1,RUFY3,TTC28,ZFYVE26,OGA,RASAL2,GORASP1,PAN3,CEP350,KMT2E,CLASP2,NUMB,MORC3,MINDY2,RICTOR,CALCOCO1,DPP8,USP24,KAT6B,APAF1,FAM76B,POGZ,LRRFIP1,BRWD3,TRIM23,AKAP10,ADNP,MAP3K12,IKZF4,GAN,FUBP1,DCAF5,NF1,WDR20,SCAPER,EZH1,MRNIP,THAP6,DHX15,DDX17,SENP7,MTRF1,DYRK1A,ASXL2,STRN,CTDSPL2,MARF1,INO80,CEP290,TRIP11,TRPM7,NEK1,WSB1,SLC24A1,TRAK2,MAP4K3,MKLN1,PHIP,DLG1,ALS2,ELK4,KLC1,TRIM52,CLMN,CRIM1,USF3,JAK1,FBXO11,CCDC93,TTC13,STK36,YOD1,UBAP2,HP1BP3,STRADA,VPS13C,ZFX,DIDO1,TJP1,PIKFYVE,PUM2,RBM5,USP3,NKTR,DST,FARP2,ZNF17,TTLL3,DOT1L,CRBN,TUBE1,RNF169,CEP170,BAZ2B,ARHGEF12,BICRAL,WDR33,WDR26,LONP2,FRYL,JMJD1C,ASXL1,ARHGAP21,TSC1,SPG11,TEP1,MAN2C1,WHAMM,PRPF4B,MED13,KBTBD2
Exist in public source
NA

check buttonlncRNA targets the promoter region and positively regulates the gene expression.

check buttonlncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for AC093110.3

lncrna_RNA
check buttonlncRNA targets the 3'UTR region and negatively regulates the mRNA.
Only predicted by lncTar
MRPL28,PSMB5,ATP5MC1,RNH1,HINT2,GPX4,HSD17B10,RNF181,EIF6,MRPS34,GET3,TXN2,LAMTOR2,TSR3,MRPL51,UQCRC1,MRPL24,MYDGF,AURKAIP1,TMEM208,ALDOA,ISOC2,MRPL54,RPN1,FKBP8,SLC25A11,COPE,NDUFB10,MZT2B,PPP1CA,PKM,AP2S1,COX6A1,PSMB6,NDUFB11,NDUFS6,VKORC1,FARSA,MFSD5,PSMB3,EDF1,PARK7,NAXE,OAZ1,NUBP2,PGLS
Exist in public source
NA

check buttonlncRNA targets the skipped exon region.
-lncRNA and exonskipping events are positively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonORF mutation

-lncRNA and exonskipping events are negatively correlated.
LncRNA Ensembl IDLncRNA ENST IDExon IDSkipped ExondGndGGene name with skipped exonTransID with skipped exonLOF

check buttonlncRNA targets by miRNA.
LncRNA Ensembl IDmiRNA IDLncRNA ENST IDBinding site in lncRNAScoreEnergyAlign LenPublic source

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Variants for AC093110.3

check buttonRNA A-to-I editing events in lncRNA.
LncRNAediting IDLncRNA Ensembl IDChromosomeEditing PositionStrandGene TypeGene NameTranscript IDTranscript TypeTranscript Name

check buttonEdited-associated DElncRNAs in cancer.
LncRNA Ensembl IDLncRNA IndexCancer TypeChr_Postion_StrandAVE1AVE2log2FCW-valueP-valueAdjc.p-valueChange

check buttonCorrelation between RNA A-to-I editing events's frequecy and lncRNA expression.
LncRNA Ensembl IDLncRNA IndexCorrelationP-valueAdjc.p-value

check buttonCis-expression quantitative trait loci(cis-eQTL) of lncRNA.
LncRNA Ensembl IDLncRNA NameSNP infoNumber of Positive corelated CancerPositive corelated CancerNumber of Negative corelated CancerNegative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncrna_enhancer
check buttonlncRNA regulates differentially expressed genes by function as enhancer.
LncRNA Ensembl IDPC Gene IDPC Gene NamePositive correlated cancersCancer with PC gene up-regulationCancer with PC gene down-regulation
ENSG00000238018ENSG00000006740ARHGAP44CHOL,ESCA,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000012822CALCOCO1CHOL,KIRC,LGG,LUAD,LUSCLUAD,LUSC
ENSG00000238018ENSG00000032219ARID4ACHOL,COAD,ESCA,KIRC,LUAD,LUSC,PAAD,TGCTLUSC
ENSG00000238018ENSG00000047365ARAP2CHOL,COAD,LAML,LGG,LUAD,LUSC,PAADLUAD,LUSC
ENSG00000238018ENSG00000062716VMP1CHOL,COAD,ESCA,KIRC,PAAD,STADKIRC
ENSG00000238018ENSG00000068650ATP11ACHOL,ESCA,LGG,LUSC,PAAD,TGCTLUSC
ENSG00000238018ENSG00000071073MGAT4ACHOL,ESCA,LAML,LUSC,TGCTLUSC
ENSG00000238018ENSG00000088854C20orf194CHOL,KIRC,LGG,LUAD,LUSC,TGCTLUAD
ENSG00000238018ENSG00000100154TTC28CHOL,KIRC,LAML,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000103994ZNF106CHOL,COAD,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000104067TJP1CHOL,COAD,LGG,LUAD,LUSC,PAAD,TGCTLUSC
ENSG00000238018ENSG00000109046WSB1CHOL,COAD,ESCA,KIRC,LGG,LUSC,PAADKIRC
ENSG00000238018ENSG00000109686SH3D19CHOL,COAD,ESCA,LUAD,LUSCLUSC
ENSG00000238018ENSG00000114541FRMD4BCHOL,COAD,LUAD,LUSC,PAADLUAD,LUSC
ENSG00000238018ENSG00000124831LRRFIP1CHOL,COAD,LUAD,LUSC,PAADLUSC
ENSG00000238018ENSG00000128833MYO5CCHOL,COAD,ESCA,LUSC,PAADLUSC
ENSG00000238018ENSG00000128872TMOD2CHOL,ESCA,KIRC,LUAD,LUSCLUAD
ENSG00000238018ENSG00000130158DOCK6CHOL,ESCA,KIRC,LAML,LUAD,LUSC,PAADKIRC
ENSG00000238018ENSG00000138593SECISBP2LCHOL,COAD,LAML,LGG,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000138735PDE5ACHOL,COAD,KIRC,LUAD,LUSCLUAD,LUSC
ENSG00000238018ENSG00000139132FGD4CHOL,COAD,KIRC,LUAD,LUSC,PAAD,TGCTLUSC
ENSG00000238018ENSG00000139625MAP3K12CHOL,KIRC,LAML,LGG,TGCTKIRC
ENSG00000238018ENSG00000144802NFKBIZCHOL,COAD,LUAD,LUSC,PAAD,STADLUAD,LUSC
ENSG00000238018ENSG00000150938CRIM1CHOL,LAML,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000154309DISP1CHOL,ESCA,LAML,LUAD,LUSCLUAD,LUSC
ENSG00000238018ENSG00000154447SH3RF1CHOL,ESCA,LAML,LUSC,PAADLUSC
ENSG00000238018ENSG00000161010MRNIPCHOL,ESCA,KIRC,LAML,STAD,TGCTKIRC
ENSG00000238018ENSG00000161960EIF4A1CHOL,COAD,KIRC,LGG,PAAD,STAD,TGCTKIRC
ENSG00000238018ENSG00000164877MICALL2CHOL,ESCA,KIRC,PAAD,STADKIRC
ENSG00000238018ENSG00000166012TAF1DCHOL,COAD,ESCA,KIRC,PAAD,STADKIRC
ENSG00000238018ENSG00000167615LENG8CHOL,COAD,ESCA,KIRC,LGG,PAAD,STAD,TGCTKIRC
ENSG00000238018ENSG00000173517PEAK1CHOL,COAD,ESCA,KIRC,LAML,LUAD,LUSCLUAD,LUSC
ENSG00000238018ENSG00000175309PHYKPLCHOL,COAD,ESCA,KIRC,LAML,PAAD,STADKIRC
ENSG00000238018ENSG00000175455CCDC14CHOL,COAD,ESCA,KIRC,LGG,PAAD,STADKIRC
ENSG00000238018ENSG00000176018LYSMD3CHOL,COAD,ESCA,LUSC,TGCTLUSC
ENSG00000238018ENSG00000184384MAML2CHOL,COAD,LAML,LUAD,LUSCLUSC
ENSG00000238018ENSG00000185477GPRIN3CHOL,COAD,ESCA,KIRC,LUSCLUSC
ENSG00000238018ENSG00000187231SESTD1CHOL,COAD,ESCA,KIRC,LGG,LUAD,LUSC,STAD,TGCTLUSC
ENSG00000238018ENSG00000204149AGAP6CHOL,COAD,ESCA,KIRC,PAAD,STADKIRC
ENSG00000238018ENSG00000204217BMPR2CHOL,COAD,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000214013GANCCHOL,COAD,KIRC,LUAD,LUSC,PAAD,TGCTLUSC
ENSG00000238018ENSG00000214021TTLL3CHOL,COAD,ESCA,KIRC,LGG,PAAD,STADKIRC
ENSG00000238018ENSG00000266338NBPF15CHOL,ESCA,KIRC,PAAD,TGCTKIRC
ENSG00000238018ENSG00000013441CLK1COAD,ESCA,KIRC,LAML,LGG,PAAD,STADKIRC
ENSG00000238018ENSG00000066933MYO9ACOAD,LAML,LUAD,LUSC,TGCTLUSC
ENSG00000238018ENSG00000067208EVI5COAD,ESCA,KIRC,LUAD,LUSC,STADLUSC
ENSG00000238018ENSG00000076641PAG1COAD,ESCA,KIRC,LAML,STADKIRC
ENSG00000238018ENSG00000105483CARD8COAD,ESCA,KIRC,LAML,LUAD,LUSCLUSC
ENSG00000238018ENSG00000113240CLK4COAD,KIRC,LAML,LGG,STADKIRC
ENSG00000238018ENSG00000124406ATP8A1COAD,ESCA,LUSC,STAD,TGCTLUSC
ENSG00000238018ENSG00000137831UACACOAD,ESCA,KIRC,LUAD,LUSC,STAD,TGCTLUAD,LUSC
ENSG00000238018ENSG00000145390USP53COAD,LAML,LUAD,LUSC,PAADLUSC
ENSG00000238018ENSG00000145476CYP4V2COAD,ESCA,LGG,LUAD,LUSCLUSC
ENSG00000238018ENSG00000151276MAGI1COAD,ESCA,LUAD,LUSC,PAADLUAD,LUSC
ENSG00000238018ENSG00000161791FMNL3COAD,KIRC,LAML,LUAD,TGCTKIRC
ENSG00000238018ENSG00000163697APBB2COAD,KIRC,LUAD,LUSC,TGCTLUAD,LUSC
ENSG00000238018ENSG00000184465WDR27COAD,ESCA,KIRC,LGG,PAAD,STADKIRC
ENSG00000238018ENSG00000111450STX2ESCA,KIRC,LUAD,LUSC,TGCTLUSC
ENSG00000238018ENSG00000117616RSRP1ESCA,KIRC,LGG,PAAD,STADKIRC
ENSG00000238018ENSG00000163072NOSTRINESCA,KIRC,LUAD,LUSC,STADLUAD,LUSC
ENSG00000238018ENSG00000256525POLG2ESCA,KIRC,LAML,PAAD,STAD,TGCTKIRC
ENSG00000238018ENSG00000184271POU6F1KIRC,LAML,LUAD,LUSC,TGCTLUSC

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lncRNAs regulate the target genes through recruiting transcript factors

lncrna_TF
check buttonLncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

check buttonLncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).
lncRNA IDTF IDTF NamePCgene IDPCgene NameNumber of CancerCanaer Types

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lncRNAs regulate the alternative splicing event through interacting with splicing factor

lncrna_AS
check buttonLncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

check buttonLncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.
LncRNA Ensembl IDRBP IDRBP Gene NameExon Skipping IDSkipped ExonEX Gene NameEX Affected TransIDORF_annoCancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncrna_mRNA
check buttonlncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.
LncRNA Ensembl IDLncRNA ENST IDPC Gene NamePC Gene IDPC ENST IDdGnDGCancer with PC gene up-regulationCancer with PC gene Down-regulation
ENSG00000238018ENST00000456363NDUFS6ENSG00000145494ENST00000469176-0.3000570LUSC-
ENSG00000238018ENST00000456363ATP5MC1ENSG00000159199ENST00000355938-0.1464503LUSC-
ENSG00000238018ENST00000456363ATP5MC1ENSG00000159199ENST00000503641-0.1464503LUSC-
ENSG00000238018ENST00000456363ATP5MC1ENSG00000159199ENST00000514808-2.4350586LUSC-
ENSG00000238018ENST00000456363ATP5MC1ENSG00000159199ENST00000393366-0.1513519LUSC-
ENSG00000238018ENST00000456363ATP5MC1ENSG00000159199ENST00000506855-0.1464503LUSC-
ENSG00000238018ENST00000456363MRPL24ENSG00000143314ENST00000361531-0.172811LUSC,LUAD-
ENSG00000238018ENST00000456363MRPL24ENSG00000143314ENST00000368211-0.243111LUSC,LUAD-
ENSG00000238018ENST00000456363MZT2BENSG00000152082ENST00000425361-0.2050470LUSC-
ENSG00000238018ENST00000456363MZT2BENSG00000152082ENST00000457492-0.1456115LUSC-
ENSG00000238018ENST00000456363MZT2BENSG00000152082ENST00000281871-0.1995470LUSC-
ENSG00000238018ENST00000456363MZT2BENSG00000152082ENST00000409255-0.1102448LUSC-
ENSG00000238018ENST00000456363MZT2BENSG00000152082ENST00000455239-0.3440555LUSC-
ENSG00000238018ENST00000456363NAXEENSG00000163382ENST00000368234-0.2083554LUSC,LUAD-
ENSG00000238018ENST00000456363NAXEENSG00000163382ENST00000368233-0.12471LUSC,LUAD-
ENSG00000238018ENST00000626206NDUFS6ENSG00000145494ENST00000469176-0.3850172LUSC-
ENSG00000238018ENST00000626206ATP5MC1ENSG00000159199ENST00000355938-0.120962LUSC-
ENSG00000238018ENST00000626206ATP5MC1ENSG00000159199ENST00000503641-0.120962LUSC-
ENSG00000238018ENST00000626206ATP5MC1ENSG00000159199ENST00000514808-0.881720LUSC-
ENSG00000238018ENST00000626206ATP5MC1ENSG00000159199ENST00000393366-0.154864LUSC-
ENSG00000238018ENST00000626206ATP5MC1ENSG00000159199ENST00000506855-0.120962LUSC-
ENSG00000238018ENST00000626206MRPL24ENSG00000143314ENST00000361531-0.1967408LUSC,LUAD-
ENSG00000238018ENST00000626206MRPL24ENSG00000143314ENST00000368211-0.2431410LUSC,LUAD-
ENSG00000238018ENST00000626206MZT2BENSG00000152082ENST00000425361-0.105822LUSC-
ENSG00000238018ENST00000626206MZT2BENSG00000152082ENST00000457492-0.1522248LUSC-
ENSG00000238018ENST00000626206MZT2BENSG00000152082ENST00000281871-0.1066491LUSC-
ENSG00000238018ENST00000626206MZT2BENSG00000152082ENST00000409255-0.1225287LUSC-
ENSG00000238018ENST00000626206MZT2BENSG00000152082ENST00000455239-0.50111LUSC-
ENSG00000238018ENST00000626206NAXEENSG00000163382ENST00000368234-0.2231399LUSC,LUAD-
ENSG00000238018ENST00000626206NAXEENSG00000163382ENST00000368233-0.132884LUSC,LUAD-
ENSG00000238018ENST00000456363PKMENSG00000067225ENST00000565154-0.1938137LUSC-
ENSG00000238018ENST00000456363PKMENSG00000067225ENST00000568459-0.948726LUSC-
ENSG00000238018ENST00000456363MRPL51ENSG00000111639ENST00000543164-0.110586LUSC-
ENSG00000238018ENST00000456363MRPL51ENSG00000111639ENST00000543703-0.128590LUSC-
ENSG00000238018ENST00000456363MRPL51ENSG00000111639ENST00000538814-0.128591LUSC-
ENSG00000238018ENST00000456363MRPL51ENSG00000111639ENST00000543959-0.128591LUSC-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000338110-0.1369473LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000627059-0.1455467LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000395248-0.1455467LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000566897-0.2128474LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000569545-0.2586555LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000563060-0.1369473LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000412304-0.2128476LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000564546-0.1455467LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000564595-0.2128476LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000395240-0.1950507LUSC,LUAD-
ENSG00000238018ENST00000456363ALDOAENSG00000149925ENST00000565355-0.1319470LUSC,LUAD-
ENSG00000238018ENST00000456363EIF6ENSG00000242372ENST00000415116-0.1645497LUSC-
ENSG00000238018ENST00000626206PKMENSG00000067225ENST00000565154-0.2224433LUSC-
ENSG00000238018ENST00000626206PKMENSG00000067225ENST00000568459-0.4588463LUSC-
ENSG00000238018ENST00000626206MRPL51ENSG00000111639ENST00000537701-0.1112340LUSC-
ENSG00000238018ENST00000626206MRPL51ENSG00000111639ENST00000543164-0.1201242LUSC-
ENSG00000238018ENST00000626206MRPL51ENSG00000111639ENST00000543703-0.1252246LUSC-
ENSG00000238018ENST00000626206MRPL51ENSG00000111639ENST00000538814-0.1252247LUSC-
ENSG00000238018ENST00000626206MRPL51ENSG00000111639ENST00000543959-0.1252247LUSC-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000338110-0.1311328LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000627059-0.1311322LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000395248-0.1311322LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000566897-0.1311329LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000569545-0.3081426LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000563060-0.1311328LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000412304-0.1311331LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000564546-0.1311322LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000564595-0.1311331LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000569798-0.1050353LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000395240-0.1379426LUSC,LUAD-
ENSG00000238018ENST00000626206ALDOAENSG00000149925ENST00000565355-0.140766LUSC,LUAD-
ENSG00000238018ENST00000626206EIF6ENSG00000242372ENST00000621148-0.1013163LUSC-
ENSG00000238018ENST00000626206EIF6ENSG00000242372ENST00000374436-0.1013167LUSC-
ENSG00000238018ENST00000626206EIF6ENSG00000242372ENST00000374443-0.1013167LUSC-
ENSG00000238018ENST00000626206EIF6ENSG00000242372ENST00000374450-0.1013167LUSC-
ENSG00000238018ENST00000626206EIF6ENSG00000242372ENST00000415116-0.171621LUSC-

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lncRNAs regulate mRNA by competing with miRNA

lncrna_miRNA
check buttonlncRNA regulates mRNA by competing the miRNA binding site with mRNA.
LncRNA Ensembl IDlncRNA-miRNA-mRNACancer Types

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lncRNA coding potential

check buttonORFfinder result for the gencode.v22.lncRNA.transcript.fa.
lncRNA Ensembl IDlncRNA ENST IDlength(AA)start at transcriptend at transcript
ENSG00000238018.2ENST00000456363.12691171
ENSG00000238018.2ENST00000626206.1862581