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lncRNA: ENSG00000237476 |
Summary for LINC01637 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000237476 | Gene symbol | LINC01637 |
| Gene name | long intergenic non-protein coding RNA 1637 | |
| HGNC | 52424 | |
| Entrez ID | 101928891 | |
| Gene type | lincRNA | |
| Synonyms | XXbac-B135H6.15|LINC01637|22q11.21 | |
| UniProtAcc |
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Structure and expression level for LINC01637 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000237476 | 8.428084e+01 | 1.381469e+00 | 2.548630e-01 | 5.420439e+00 | 5.950000e-08 | 2.670000e-07 | UP | KICH |
| ENSG00000237476 | 7.995526e+01 | 1.018763e+00 | 1.735692e-01 | 5.869493e+00 | 4.370000e-09 | 2.770000e-08 | UP | KIRP |
| ENSG00000237476 | 7.703994e+01 | 1.033988e+00 | 3.205090e-01 | 3.226082e+00 | 1.254975e-03 | 9.461093e-03 | UP | ESCA |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC01637 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000237476 | ENST00000444039 | XXbac-B135H6.15 | ENSG00000130254 | SAFB2 | 60.88 | 95.8354 | Q14151 | TF,RBP | Predict |
| ENSG00000237476 | ENST00000444039 | XXbac-B135H6.15 | ENSG00000099326 | MZF1 | 59.96 | 92.7222 | P28698 | TF | NA |
| ENSG00000237476 | ENST00000444039 | XXbac-B135H6.15 | ENSG00000179886 | TIGD5 | 9.22 | 91.665 | Q53EQ6 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000237476 | ENST00000444039 | XXbac-B135H6.15 | ENSG00000130254 | SAFB2 | 60.88 | 95.9705 | Q14151 | TF,RBP | Predict |
| ENSG00000237476 | ENST00000444039 | XXbac-B135H6.15 | ENSG00000125970 | RALY | 8.42 | 90.2033 | Q9UKM9 | RBP | NA |
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