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lncRNA: ENSG00000236318 |
Summary for LINC02888 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000236318 | Gene symbol | LINC02888 |
| Gene name | long intergenic non-protein coding RNA 2888 | |
| HGNC | 53765 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | 07p21.1|AC019117.1|LINC02888 | |
| UniProtAcc |
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Structure and expression level for LINC02888 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000236318 | 1.011435e+03 | 5.241558e+00 | 3.104290e-01 | 1.688488e+01 | 5.810000e-64 | 2.290000e-62 | UP | KIRC |
| ENSG00000236318 | 5.478567e+02 | 5.182855e+00 | 4.666555e-01 | 1.110638e+01 | 1.170000e-28 | 6.650000e-27 | UP | KIRP |
| ENSG00000236318 | 7.450799e+01 | 1.293142e+00 | 4.203826e-01 | 3.076107e+00 | 2.097228e-03 | 5.030329e-03 | UP | UCEC |
| ENSG00000236318 | 6.291561e+01 | 1.288085e+00 | 2.912594e-01 | 4.422469e+00 | 9.760000e-06 | 2.780000e-05 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC02888 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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