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lncRNA: ENSG00000236039 |
Summary for LINC02889 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000236039 | Gene symbol | LINC02889 |
| Gene name | long intergenic non-protein coding RNA 2889 | |
| HGNC | 55071 | |
| Entrez ID | 101927630 | |
| Gene type | lincRNA | |
| Synonyms | AC019117.2|07p21.1|LINC02889 | |
| UniProtAcc |
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Structure and expression level for LINC02889 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000236039 | 2.051168e+02 | 1.821360e+00 | 5.510126e-01 | 3.305479e+00 | 9.481420e-04 | 3.651598e-03 | UP | BLCA |
| ENSG00000236039 | 1.193634e+02 | 3.975627e+00 | 4.127544e-01 | 9.631942e+00 | 5.860000e-22 | 1.720000e-20 | UP | KIRP |
| ENSG00000236039 | 6.587210e+01 | 2.277114e+00 | 5.863564e-01 | 3.883497e+00 | 1.029650e-04 | 1.310589e-03 | UP | ESCA |
| ENSG00000236039 | 8.704104e+01 | -1.259291e+00 | 2.675913e-01 | -4.706026e+00 | 2.530000e-06 | 6.560000e-06 | DOWN | LUSC |
| ENSG00000236039 | 4.019075e+02 | 1.442823e+00 | 2.526505e-01 | 5.710748e+00 | 1.120000e-08 | 4.500000e-08 | UP | LUAD |
| ENSG00000236039 | 7.586429e+01 | 2.284239e+00 | 3.858319e-01 | 5.920296e+00 | 3.210000e-09 | 3.460000e-08 | UP | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC02889 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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