|
||||||
|
lncRNA: ENSG00000235899 |
Summary for LINC01564 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235899 | Gene symbol | LINC01564 |
| Gene name | long intergenic non-protein coding RNA 1564 | |
| HGNC | 51361 | |
| Entrez ID | 101927171 | |
| Gene type | antisense | |
| Synonyms | LINC01564|06p12.1 | |
| UniProtAcc |
Top |
Structure and expression level for LINC01564 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235899 | 5.485248e+01 | -2.039747e+00 | 5.903021e-01 | -3.455428e+00 | 5.494190e-04 | 2.033530e-03 | DOWN | CHOL |
| ENSG00000235899 | 3.319021e+01 | 1.111565e+00 | 2.764747e-01 | 4.020495e+00 | 5.810000e-05 | 1.968060e-04 | UP | HNSC |
| ENSG00000235899 | 8.670115e+01 | 2.118101e+00 | 3.498771e-01 | 6.053843e+00 | 1.410000e-09 | 9.630000e-09 | UP | KIRP |
| ENSG00000235899 | 9.474211e+01 | 4.083465e+00 | 2.755758e-01 | 1.481794e+01 | 1.120000e-49 | 2.680000e-48 | UP | LUSC |
| ENSG00000235899 | 3.394749e+01 | 2.901426e+00 | 3.056242e-01 | 9.493443e+00 | 2.240000e-21 | 2.500000e-20 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000235899 | -4.249360e-01 | 3.618493e-03 | CHOL | 4.948216e-03 |
Top |
lncRNA-Protein interaction for LINC01564 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
