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lncRNA: ENSG00000235888 |
Summary for AF064858.8 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235888 | Gene symbol | AF064858.8 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for AF064858.8 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235888 | 1.170096e+02 | 2.898463e+00 | 2.118030e-01 | 1.368471e+01 | 1.250000e-42 | 2.240000e-41 | UP | KIRC |
| ENSG00000235888 | 5.911173e+01 | 1.569967e+00 | 2.601772e-01 | 6.034222e+00 | 1.600000e-09 | 8.420000e-09 | UP | COAD |
| ENSG00000235888 | 8.789572e+01 | 2.403027e+00 | 5.570983e-01 | 4.313471e+00 | 1.610000e-05 | 1.503050e-04 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for AF064858.8 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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