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lncRNA: ENSG00000235884 |
Summary for LINC00941 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235884 | Gene symbol | LINC00941 |
| Gene name | long intergenic non-protein coding RNA 941 | |
| HGNC | 48635 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | 12p11.21|LINC00941 | |
| UniProtAcc |
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Structure and expression level for LINC00941 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235884 | 1.848950e+02 | 5.738791e+00 | 6.978198e-01 | 8.223886e+00 | 1.970000e-16 | 6.050000e-15 | UP | CHOL |
| ENSG00000235884 | 1.512159e+02 | 3.971713e+00 | 2.610850e-01 | 1.521234e+01 | 2.930000e-52 | 1.430000e-49 | UP | HNSC |
| ENSG00000235884 | 2.482075e+02 | 2.440575e+00 | 5.674668e-01 | 4.300824e+00 | 1.700000e-05 | 3.003560e-04 | UP | ESCA |
| ENSG00000235884 | 1.784592e+02 | 3.351617e+00 | 3.532349e-01 | 9.488352e+00 | 2.350000e-21 | 1.980000e-19 | UP | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000235884 | 4.315153e-01 | 3.080128e-03 | CHOL | 4.346288e-03 |
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lncRNA-Protein interaction for LINC00941 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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