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lncRNA: ENSG00000235621 |
Summary for LINC00494 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235621 | Gene symbol | LINC00494 |
| Gene name | long intergenic non-protein coding RNA 494 | |
| HGNC | 27657 | |
| Entrez ID | 284749 | |
| Gene type | lincRNA | |
| Synonyms | LINC00494|20q13.13 | |
| UniProtAcc |
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Structure and expression level for LINC00494 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235621 | 3.657070e+02 | 5.925285e+00 | 8.852604e-01 | 6.693268e+00 | 2.180000e-11 | 3.150000e-10 | UP | CHOL |
| ENSG00000235621 | 4.215991e+02 | 2.499559e+00 | 2.864281e-01 | 8.726656e+00 | 2.620000e-18 | 5.270000e-17 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000235621 | 3.181078e-01 | 3.320919e-02 | CHOL | 3.448016e-02 |
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lncRNA-Protein interaction for LINC00494 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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