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lncRNA: ENSG00000235576 |
Summary for LINC01871 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000235576 | Gene symbol | LINC01871 |
| Gene name | long intergenic non-protein coding RNA 1871 | |
| HGNC | 52690 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | LINC01871|02p25.1|AC092580.4 | |
| UniProtAcc |
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Structure and expression level for LINC01871 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000235576 | 3.109276e+01 | 2.455635e+00 | 1.578183e-01 | 1.555989e+01 | 1.360000e-54 | 3.920000e-53 | UP | KIRC |
| ENSG00000235576 | 1.747825e+01 | 1.680341e+00 | 2.747174e-01 | 6.116617e+00 | 9.560000e-10 | 6.680000e-09 | UP | KIRP |
| ENSG00000235576 | 2.286570e+01 | -1.313366e+00 | 2.235383e-01 | -5.875352e+00 | 4.220000e-09 | 2.120000e-08 | DOWN | COAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000235576 | -3.441777e-01 | 1.422890e-15 | COAD | 4.097925e-13 |
| ENSG00000235576 | 4.413758e-01 | 2.236624e-30 | KIRC | 8.387338e-29 |
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lncRNA-Protein interaction for LINC01871 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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