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lncRNA: ENSG00000234753 |
Summary for FOXP4-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000234753 | Gene symbol | FOXP4-AS1 |
| Gene name | FOXP4 antisense RNA 1 | |
| HGNC | 50332 | |
| Entrez ID | 101060264 | |
| Gene type | antisense | |
| Synonyms | 06p21.1|FOXP4-AS1 | |
| UniProtAcc |
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Structure and expression level for FOXP4-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000234753 | 8.094885e+01 | 2.170784e+00 | 1.508181e-01 | 1.439338e+01 | 5.690000e-47 | 1.890000e-44 | UP | PRAD |
| ENSG00000234753 | 5.503420e+01 | 1.002316e+00 | 1.517298e-01 | 6.605928e+00 | 3.950000e-11 | 1.580000e-10 | UP | BRCA |
| ENSG00000234753 | 7.984029e+01 | 2.394952e+00 | 1.624842e-01 | 1.473960e+01 | 3.590000e-49 | 3.210000e-47 | UP | COAD |
| ENSG00000234753 | 1.840267e+02 | 1.310412e+00 | 2.586035e-01 | 5.067266e+00 | 4.040000e-07 | 2.870000e-06 | UP | STAD |
| ENSG00000234753 | 9.800992e+01 | 2.360785e+00 | 2.968577e-01 | 7.952581e+00 | 1.830000e-15 | 1.540000e-13 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000234753 | 4.475069e-01 | 1.726447e-28 | PRAD | 1.695371e-25 |
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lncRNA-Protein interaction for FOXP4-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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