 lncRNA targets the enhancer region and positively regulates the gene expression. |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | RTN4,ELF4,FLII,CAST,ATP6V0C,MGLL,LEPROT,WIPI1,CAPZA2,SFXN3,BTBD10,LRP10,ITM2B,SCP2,MYOF,CAT | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000234160 | ENST00000413915 | exon_skip_90104 | chr12:10709907-10710114 | -18.60 | -0.1057 | YBX3 | ENST00000228251 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000234160 | ENST00000413915 | exon_skip_319223 | chr19:43526200-43526349 | -19.24 | -0.1617 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000234160 | ENST00000413915 | exon_skip_2091 | chr1:17634547-17634562 | -4.92 | -0.5467 | ARHGEF10L | ENST00000361221 | In-frame | | ENSG00000234160 | ENST00000413915 | exon_skip_75223 | chr11:72012400-72012442 | -7.32 | -0.1743 | NUMA1 | ENST00000393695 | In-frame |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name | | LncEditing_218578 | ENSG00000234160.1 | chr9 | 37510065 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218586 | ENSG00000234160.1 | chr9 | 37510105 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218587 | ENSG00000234160.1 | chr9 | 37510108 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218589 | ENSG00000234160.1 | chr9 | 37510117 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218593 | ENSG00000234160.1 | chr9 | 37510146 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218606 | ENSG00000234160.1 | chr9 | 37510182 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218608 | ENSG00000234160.1 | chr9 | 37510187 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218609 | ENSG00000234160.1 | chr9 | 37510217 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218611 | ENSG00000234160.1 | chr9 | 37510231 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218619 | ENSG00000234160.1 | chr9 | 37510289 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218620 | ENSG00000234160.1 | chr9 | 37510292 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 | | LncEditing_218622 | ENSG00000234160.1 | chr9 | 37510298 | + | antisense | RP11-613M10.6 | ENST00000413915.1 | antisense | RP11-613M10.6-001 |
| Edited-associated DElncRNAs in cancer. |
 |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change | | ENSG00000234160 | LncEditing_218578 | UCEC | chr9_37510065_+ | 1.078350e+01 | 5.671951e+00 | 1.078855e+00 | 9.036167e+00 | 1.622620e-19 | 6.313005e-19 | UP | | ENSG00000234160 | LncEditing_218586 | UCEC | chr9_37510105_+ | 9.405924e+00 | 5.172086e+00 | 1.158986e+00 | 1.024412e+01 | 1.257682e-24 | 7.282858e-24 | UP | | ENSG00000234160 | LncEditing_218587 | UCEC | chr9_37510108_+ | 8.916080e+00 | 4.427156e+00 | 9.900704e-01 | 1.225538e+01 | 1.572186e-34 | 1.702063e-33 | UP | | ENSG00000234160 | LncEditing_218593 | UCEC | chr9_37510146_+ | 1.168952e+01 | 5.341271e+00 | 8.849860e-01 | 1.114742e+01 | 7.371198e-29 | 5.244081e-28 | UP | | ENSG00000234160 | LncEditing_218606 | UCEC | chr9_37510182_+ | 1.121347e+01 | 5.079220e+00 | 8.752326e-01 | 1.210801e+01 | 9.579414e-34 | 9.541097e-33 | UP | | ENSG00000234160 | LncEditing_218608 | UCEC | chr9_37510187_+ | 1.175717e+01 | 5.571899e+00 | 9.282461e-01 | 1.019459e+01 | 2.096271e-24 | 1.186299e-23 | UP | | ENSG00000234160 | LncEditing_218619 | UCEC | chr9_37510289_+ | 9.766176e+00 | 6.088562e+00 | 1.466938e+00 | 7.016252e+00 | 2.278994e-12 | 4.850166e-12 | UP | | ENSG00000234160 | LncEditing_218586 | SARC | chr9_37510105_+ | 1.137640e+01 | 8.292326e+00 | 2.192045e+00 | 4.188587e+00 | 2.806972e-05 | 3.319784e-05 | UP | | ENSG00000234160 | LncEditing_218593 | SARC | chr9_37510146_+ | 1.302508e+01 | 9.439118e+00 | 2.152537e+00 | 4.156522e+00 | 3.231289e-05 | 3.773245e-05 | UP | | ENSG00000234160 | LncEditing_218606 | SARC | chr9_37510182_+ | 1.435242e+01 | 7.707926e+00 | 1.114977e+00 | 8.708330e+00 | 3.083840e-18 | 2.473776e-17 | UP | | ENSG00000234160 | LncEditing_218608 | SARC | chr9_37510187_+ | 1.290533e+01 | 9.755001e+00 | 2.476759e+00 | 4.401653e+00 | 1.074294e-05 | 1.299720e-05 | UP | | ENSG00000234160 | LncEditing_218578 | LIHC | chr9_37510065_+ | 6.075686e+00 | 3.757618e+00 | 1.442525e+00 | 5.669484e+00 | 1.432280e-08 | 2.210513e-08 | UP | | ENSG00000234160 | LncEditing_218586 | LIHC | chr9_37510105_+ | 5.682954e+00 | 3.050145e+00 | 1.113879e+00 | 9.896466e+00 | 4.312445e-23 | 2.741483e-22 | UP | | ENSG00000234160 | LncEditing_218587 | LIHC | chr9_37510108_+ | 5.492217e+00 | 2.394452e+00 | 8.349384e-01 | 1.227608e+01 | 1.217489e-34 | 2.955178e-33 | UP | | ENSG00000234160 | LncEditing_218593 | LIHC | chr9_37510146_+ | 5.980807e+00 | 3.790953e+00 | 1.520267e+00 | 5.062832e+00 | 4.130738e-07 | 5.685088e-07 | UP | | ENSG00000234160 | LncEditing_218606 | LIHC | chr9_37510182_+ | 7.371599e+00 | 3.406638e+00 | 8.979651e-01 | 8.131104e+00 | 4.253975e-16 | 1.102730e-15 | UP | | ENSG00000234160 | LncEditing_218606 | UCS | chr9_37510182_+ | 1.084216e+01 | 6.819339e+00 | 1.494884e+00 | 3.900067e+00 | 9.616588e-05 | 4.097978e-04 | UP | | ENSG00000234160 | LncEditing_218608 | UCS | chr9_37510187_+ | 1.329605e+01 | 8.192848e+00 | 1.431515e+00 | 2.935787e+00 | 3.327031e-03 | 5.545052e-03 | UP | | ENSG00000234160 | LncEditing_218578 | KIRC | chr9_37510065_+ | 6.057087e+00 | 4.603473e+00 | 2.525883e+00 | 6.363425e+00 | 1.973039e-10 | 2.937812e-10 | UP | | ENSG00000234160 | LncEditing_218586 | KIRC | chr9_37510105_+ | 5.891126e+00 | 3.688123e+00 | 1.480041e+00 | 1.110820e+01 | 1.144383e-28 | 5.215004e-28 | UP | | ENSG00000234160 | LncEditing_218587 | KIRC | chr9_37510108_+ | 5.592839e+00 | 3.327363e+00 | 1.334754e+00 | 1.137608e+01 | 5.501975e-30 | 2.780930e-29 | UP | | ENSG00000234160 | LncEditing_218593 | KIRC | chr9_37510146_+ | 7.487837e+00 | 4.512119e+00 | 1.368468e+00 | 5.806331e+00 | 6.385648e-09 | 9.002916e-09 | UP | | ENSG00000234160 | LncEditing_218606 | DLBC | chr9_37510182_+ | 1.744024e+01 | 1.067931e+01 | 1.413225e+00 | 3.088548e+00 | 2.011369e-03 | 5.170390e-03 | UP | | ENSG00000234160 | LncEditing_218578 | GBM | chr9_37510065_+ | 1.100932e+01 | 8.864281e+00 | 3.198462e+00 | 3.344160e+00 | 8.253222e-04 | 1.030379e-03 | UP | | ENSG00000234160 | LncEditing_218586 | GBM | chr9_37510105_+ | 9.849929e+00 | 8.613469e+00 | 5.167451e+00 | 2.262490e+00 | 2.366713e-02 | 2.442182e-02 | UP | | ENSG00000234160 | LncEditing_218587 | GBM | chr9_37510108_+ | 9.772191e+00 | 5.162759e+00 | 1.086319e+00 | 4.087207e+00 | 4.365971e-05 | 6.433643e-05 | UP | | ENSG00000234160 | LncEditing_218593 | GBM | chr9_37510146_+ | 1.020035e+01 | 7.245064e+00 | 2.026142e+00 | 4.133780e+00 | 3.568454e-05 | 5.336190e-05 | UP | | ENSG00000234160 | LncEditing_218606 | GBM | chr9_37510182_+ | 1.036668e+01 | 6.302398e+00 | 1.392796e+00 | 5.850204e+00 | 4.909708e-09 | 1.476563e-08 | UP | | ENSG00000234160 | LncEditing_218608 | GBM | chr9_37510187_+ | 1.080728e+01 | 7.239814e+00 | 1.730168e+00 | 5.226760e+00 | 1.725065e-07 | 3.834004e-07 | UP | | ENSG00000234160 | LncEditing_218609 | GBM | chr9_37510217_+ | 1.124027e+01 | 8.564323e+00 | 2.549296e+00 | 3.620904e+00 | 2.935754e-04 | 3.868119e-04 | UP | | ENSG00000234160 | LncEditing_218611 | GBM | chr9_37510231_+ | 1.071754e+01 | 9.130044e+00 | 4.323756e+00 | 2.279341e+00 | 2.264683e-02 | 2.345875e-02 | UP | | ENSG00000234160 | LncEditing_218586 | MESO | chr9_37510105_+ | 9.595056e+00 | 5.109826e+00 | 1.100089e+00 | 4.958520e+00 | 7.103205e-07 | 5.522742e-06 | UP | | ENSG00000234160 | LncEditing_218606 | MESO | chr9_37510182_+ | 1.147569e+01 | 6.552111e+00 | 1.236783e+00 | 4.448069e+00 | 8.664574e-06 | 3.538717e-05 | UP | | ENSG00000234160 | LncEditing_218608 | MESO | chr9_37510187_+ | 1.096172e+01 | 7.571325e+00 | 1.873164e+00 | 2.278436e+00 | 2.270059e-02 | 2.503505e-02 | UP | | ENSG00000234160 | LncEditing_218586 | UVM | chr9_37510105_+ | 1.176642e+01 | 9.291454e+00 | 2.935142e+00 | 2.580858e+00 | 9.855524e-03 | 1.153704e-02 | UP | | ENSG00000234160 | LncEditing_218606 | UVM | chr9_37510182_+ | 1.287928e+01 | 9.062755e+00 | 1.972267e+00 | 4.000661e+00 | 6.316571e-05 | 1.475335e-04 | UP | | ENSG00000234160 | LncEditing_218608 | UVM | chr9_37510187_+ | 1.326380e+01 | 1.032916e+01 | 2.771842e+00 | 2.897728e+00 | 3.758769e-03 | 4.938382e-03 | UP | | ENSG00000234160 | LncEditing_218586 | BLCA | chr9_37510105_+ | 6.265046e+00 | 3.470045e+00 | 1.173198e+00 | 9.026971e+00 | 1.764897e-19 | 6.576054e-19 | UP | | ENSG00000234160 | LncEditing_218593 | BLCA | chr9_37510146_+ | 7.346119e+00 | 3.847607e+00 | 1.071787e+00 | 6.700923e+00 | 2.071068e-11 | 3.657990e-11 | UP | | ENSG00000234160 | LncEditing_218578 | LGG | chr9_37510065_+ | 1.284815e+01 | 1.143831e+01 | 5.963493e+00 | 3.695618e+00 | 2.193530e-04 | 2.408448e-04 | UP | | ENSG00000234160 | LncEditing_218586 | LGG | chr9_37510105_+ | 1.208914e+01 | 1.110301e+01 | 8.145929e+00 | 2.907825e+00 | 3.639522e-03 | 3.823664e-03 | UP | | ENSG00000234160 | LncEditing_218587 | LGG | chr9_37510108_+ | 1.192406e+01 | 6.677598e+00 | 1.195494e+00 | 5.249818e+00 | 1.522496e-07 | 1.968649e-07 | UP | | ENSG00000234160 | LncEditing_218606 | LGG | chr9_37510182_+ | 1.379493e+01 | 1.012526e+01 | 2.241256e+00 | 1.028825e+01 | 7.961020e-25 | 3.105238e-24 | UP | | ENSG00000234160 | LncEditing_218608 | LGG | chr9_37510187_+ | 1.465040e+01 | 1.108895e+01 | 2.488690e+00 | 6.596437e+00 | 4.211557e-11 | 6.578228e-11 | UP | | ENSG00000234160 | LncEditing_218586 | ACC | chr9_37510105_+ | 1.249557e+01 | 5.385280e+00 | 8.235034e-01 | 4.613852e+00 | 3.952734e-06 | 2.734864e-05 | UP | | ENSG00000234160 | LncEditing_218586 | COAD | chr9_37510105_+ | 8.108531e+00 | 5.718885e+00 | 1.985282e+00 | 7.074074e+00 | 1.504499e-12 | 2.811038e-12 | UP | | ENSG00000234160 | LncEditing_218587 | COAD | chr9_37510108_+ | 7.754656e+00 | 5.028413e+00 | 1.600103e+00 | 9.716433e+00 | 2.566128e-22 | 1.242239e-21 | UP | | ENSG00000234160 | LncEditing_218606 | COAD | chr9_37510182_+ | 9.869625e+00 | 5.758141e+00 | 1.286352e+00 | 8.636617e+00 | 5.790219e-18 | 1.601710e-17 | UP | | ENSG00000234160 | LncEditing_218578 | LUSC | chr9_37510065_+ | 9.441376e+00 | 4.651139e+00 | 9.790358e-01 | 7.681235e+00 | 1.575619e-14 | 2.623325e-14 | UP | | ENSG00000234160 | LncEditing_218586 | LUSC | chr9_37510105_+ | 7.747999e+00 | 4.235937e+00 | 1.147918e+00 | 1.032543e+01 | 5.407762e-25 | 2.156429e-24 | UP | | ENSG00000234160 | LncEditing_218587 | LUSC | chr9_37510108_+ | 7.179490e+00 | 3.292723e+00 | 8.892048e-01 | 1.336694e+01 | 9.433938e-41 | 2.343971e-39 | UP | | ENSG00000234160 | LncEditing_218593 | LUSC | chr9_37510146_+ | 8.756104e+00 | 4.594396e+00 | 1.074791e+00 | 8.077604e+00 | 6.605182e-16 | 1.212201e-15 | UP | | ENSG00000234160 | LncEditing_218586 | HNSC | chr9_37510105_+ | 7.898398e+00 | 4.967342e+00 | 1.494577e+00 | 8.529159e+00 | 1.474150e-17 | 2.632410e-17 | UP | | ENSG00000234160 | LncEditing_218587 | HNSC | chr9_37510108_+ | 7.476263e+00 | 3.148095e+00 | 8.013859e-01 | 1.384329e+01 | 1.396649e-43 | 4.189946e-42 | UP | | ENSG00000234160 | LncEditing_218593 | HNSC | chr9_37510146_+ | 9.811325e+00 | 5.350911e+00 | 1.143297e+00 | 8.083638e+00 | 6.286262e-16 | 1.004806e-15 | UP | | ENSG00000234160 | LncEditing_218606 | HNSC | chr9_37510182_+ | 1.046484e+01 | 4.933885e+00 | 9.218672e-01 | 1.033602e+01 | 4.842388e-25 | 1.396843e-24 | UP | | ENSG00000234160 | LncEditing_218587 | KICH | chr9_37510108_+ | 4.097827e+00 | 2.388498e+00 | 1.284100e+00 | 4.490171e+00 | 7.116599e-06 | 3.966318e-05 | UP | | ENSG00000234160 | LncEditing_218586 | SKCM | chr9_37510105_+ | 8.143420e+00 | 5.127290e+00 | 1.498266e+00 | 9.263190e+00 | 1.984142e-20 | 3.939106e-20 | UP | | ENSG00000234160 | LncEditing_218587 | SKCM | chr9_37510108_+ | 7.507250e+00 | 3.543236e+00 | 9.231762e-01 | 1.179920e+01 | 3.940302e-32 | 3.129064e-31 | UP | | ENSG00000234160 | LncEditing_218593 | SKCM | chr9_37510146_+ | 7.843862e+00 | 6.279412e+00 | 3.115898e+00 | 3.713948e+00 | 2.040504e-04 | 2.197883e-04 | UP | | ENSG00000234160 | LncEditing_218606 | SKCM | chr9_37510182_+ | 1.079610e+01 | 5.506172e+00 | 1.029454e+00 | 1.048725e+01 | 9.886419e-26 | 3.481739e-25 | UP | | ENSG00000234160 | LncEditing_218608 | SKCM | chr9_37510187_+ | 1.058509e+01 | 6.005335e+00 | 1.222916e+00 | 7.484969e+00 | 7.156392e-14 | 1.027780e-13 | UP | | ENSG00000234160 | LncEditing_218587 | LAML | chr9_37510108_+ | 9.879363e+00 | 7.377984e+00 | 2.374217e+00 | 4.015215e+00 | 5.939155e-05 | 9.715041e-05 | UP | | ENSG00000234160 | LncEditing_218578 | PCPG | chr9_37510065_+ | 5.529134e+00 | 5.056740e+00 | 7.761208e+00 | 2.411118e+00 | 1.590372e-02 | 1.717602e-02 | UP | | ENSG00000234160 | LncEditing_218586 | PCPG | chr9_37510105_+ | 5.639963e+00 | 4.520600e+00 | 3.133112e+00 | 4.818404e+00 | 1.447109e-06 | 3.098215e-06 | UP | | ENSG00000234160 | LncEditing_218587 | PCPG | chr9_37510108_+ | 5.516977e+00 | 3.769231e+00 | 1.819479e+00 | 5.960161e+00 | 2.519900e-09 | 1.012125e-08 | UP | | ENSG00000234160 | LncEditing_218593 | PCPG | chr9_37510146_+ | 5.882691e+00 | 4.988071e+00 | 4.201781e+00 | 3.185205e+00 | 1.446517e-03 | 1.793710e-03 | UP | | ENSG00000234160 | LncEditing_218606 | PCPG | chr9_37510182_+ | 6.149262e+00 | 4.955300e+00 | 3.210881e+00 | 3.733507e+00 | 1.888323e-04 | 2.585141e-04 | UP | | ENSG00000234160 | LncEditing_218586 | KIRP | chr9_37510105_+ | 5.418955e+00 | 3.791806e+00 | 1.941259e+00 | 6.468810e+00 | 9.877780e-11 | 2.335173e-10 | UP | | ENSG00000234160 | LncEditing_218587 | KIRP | chr9_37510108_+ | 5.086361e+00 | 3.029651e+00 | 1.337825e+00 | 8.909520e+00 | 5.125386e-19 | 3.835497e-18 | UP | | ENSG00000234160 | LncEditing_218606 | KIRP | chr9_37510182_+ | 6.496473e+00 | 3.858410e+00 | 1.330406e+00 | 8.108358e+00 | 5.130843e-16 | 2.450796e-15 | UP | | ENSG00000234160 | LncEditing_218578 | THCA | chr9_37510065_+ | 5.887921e+00 | 5.019574e+00 | 4.344176e+00 | 4.080115e+00 | 4.501352e-05 | 5.889349e-05 | UP | | ENSG00000234160 | LncEditing_218586 | THCA | chr9_37510105_+ | 5.536745e+00 | 4.652090e+00 | 3.981538e+00 | 5.519546e+00 | 3.398772e-08 | 5.537733e-08 | UP | | ENSG00000234160 | LncEditing_218587 | THCA | chr9_37510108_+ | 5.422879e+00 | 3.877365e+00 | 2.066190e+00 | 7.736331e+00 | 1.023268e-14 | 2.490905e-14 | UP | | ENSG00000234160 | LncEditing_218593 | THCA | chr9_37510146_+ | 5.820479e+00 | 5.033605e+00 | 4.772229e+00 | 3.767032e+00 | 1.651995e-04 | 2.081174e-04 | UP | | ENSG00000234160 | LncEditing_218606 | THCA | chr9_37510182_+ | 6.300348e+00 | 4.817651e+00 | 2.583300e+00 | 7.588167e+00 | 3.244628e-14 | 7.566671e-14 | UP | | ENSG00000234160 | LncEditing_218586 | CHOL | chr9_37510105_+ | 6.291924e+00 | 3.510672e+00 | 1.187996e+00 | 3.449395e+00 | 5.618439e-04 | 3.217833e-03 | UP | | ENSG00000234160 | LncEditing_218606 | THYM | chr9_37510182_+ | 1.223157e+01 | 9.036861e+00 | 2.289815e+00 | 4.721609e+00 | 2.339859e-06 | 5.844255e-06 | UP | | ENSG00000234160 | LncEditing_218608 | THYM | chr9_37510187_+ | 1.437620e+01 | 9.376847e+00 | 1.622039e+00 | 3.742950e+00 | 1.818727e-04 | 2.978097e-04 | UP | | ENSG00000234160 | LncEditing_218578 | OV | chr9_37510065_+ | 5.862901e+00 | 4.238576e+00 | 2.136592e+00 | 6.165968e+00 | 7.005323e-10 | 1.177586e-09 | UP | | ENSG00000234160 | LncEditing_218586 | OV | chr9_37510105_+ | 5.914715e+00 | 3.317315e+00 | 1.198620e+00 | 9.136820e+00 | 6.431564e-20 | 2.934900e-19 | UP | | ENSG00000234160 | LncEditing_218587 | OV | chr9_37510108_+ | 5.398017e+00 | 2.420512e+00 | 8.642168e-01 | 8.967194e+00 | 3.041638e-19 | 1.297813e-18 | UP | | ENSG00000234160 | LncEditing_218589 | OV | chr9_37510117_+ | 6.370483e+00 | 4.603863e+00 | 2.134207e+00 | 3.926021e+00 | 8.636249e-05 | 9.963653e-05 | UP | | ENSG00000234160 | LncEditing_218593 | OV | chr9_37510146_+ | 6.187696e+00 | 3.580410e+00 | 1.266982e+00 | 8.711494e+00 | 2.998966e-18 | 1.141934e-17 | UP | | ENSG00000234160 | LncEditing_218606 | OV | chr9_37510182_+ | 6.574052e+00 | 3.417022e+00 | 1.059273e+00 | 1.065251e+01 | 1.697279e-26 | 1.375020e-25 | UP | | ENSG00000234160 | LncEditing_218608 | OV | chr9_37510187_+ | 6.765894e+00 | 3.841198e+00 | 1.224403e+00 | 9.316717e+00 | 1.199960e-20 | 5.766919e-20 | UP | | ENSG00000234160 | LncEditing_218609 | OV | chr9_37510217_+ | 6.465147e+00 | 4.442100e+00 | 1.846922e+00 | 5.585871e+00 | 2.325316e-08 | 3.407376e-08 | UP | | ENSG00000234160 | LncEditing_218611 | OV | chr9_37510231_+ | 6.402363e+00 | 4.657978e+00 | 2.179121e+00 | 3.681746e+00 | 2.316424e-04 | 2.600674e-04 | UP | | ENSG00000234160 | LncEditing_218619 | OV | chr9_37510289_+ | 6.219528e+00 | 4.552783e+00 | 2.221944e+00 | 4.917447e+00 | 8.768006e-07 | 1.153388e-06 | UP | | ENSG00000234160 | LncEditing_218620 | OV | chr9_37510292_+ | 6.528916e+00 | 4.634738e+00 | 2.022836e+00 | 4.369022e+00 | 1.248044e-05 | 1.514953e-05 | UP | | ENSG00000234160 | LncEditing_218622 | OV | chr9_37510298_+ | 6.334549e+00 | 4.662337e+00 | 2.261479e+00 | 3.933903e+00 | 8.357763e-05 | 9.648416e-05 | UP | | ENSG00000234160 | LncEditing_218578 | TGCT | chr9_37510065_+ | 1.582436e+01 | 1.192966e+01 | 2.453419e+00 | 4.606855e+00 | 4.088047e-06 | 6.531295e-06 | UP | | ENSG00000234160 | LncEditing_218586 | TGCT | chr9_37510105_+ | 1.484604e+01 | 8.452543e+00 | 1.230586e+00 | 5.554637e+00 | 2.781889e-08 | 6.117165e-08 | UP | | ENSG00000234160 | LncEditing_218589 | TGCT | chr9_37510117_+ | 1.569950e+01 | 1.282640e+01 | 3.429327e+00 | 2.223572e+00 | 2.617726e-02 | 2.669950e-02 | UP | | ENSG00000234160 | LncEditing_218606 | TGCT | chr9_37510182_+ | 1.573030e+01 | 1.058068e+01 | 1.747903e+00 | 5.322061e+00 | 1.025979e-07 | 2.056988e-07 | UP | | ENSG00000234160 | LncEditing_218608 | TGCT | chr9_37510187_+ | 1.627283e+01 | 1.216107e+01 | 2.379849e+00 | 3.384773e+00 | 7.123702e-04 | 8.730198e-04 | UP | | ENSG00000234160 | LncEditing_218611 | TGCT | chr9_37510231_+ | 1.793791e+01 | 1.293998e+01 | 2.122346e+00 | 2.710409e+00 | 6.720036e-03 | 7.329320e-03 | UP | | ENSG00000234160 | LncEditing_218619 | TGCT | chr9_37510289_+ | 1.664959e+01 | 1.303558e+01 | 2.832612e+00 | 2.474001e+00 | 1.336093e-02 | 1.398836e-02 | UP | | ENSG00000234160 | LncEditing_218622 | TGCT | chr9_37510298_+ | 1.973087e+01 | 1.273507e+01 | 1.583160e+00 | 3.761860e+00 | 1.686543e-04 | 2.265162e-04 | UP | | ENSG00000234160 | LncEditing_218586 | READ | chr9_37510105_+ | 1.074087e+01 | 6.258326e+00 | 1.283265e+00 | 4.779183e+00 | 1.760090e-06 | 3.737474e-06 | UP | | ENSG00000234160 | LncEditing_218587 | READ | chr9_37510108_+ | 9.190530e+00 | 5.519941e+00 | 1.359628e+00 | 5.792016e+00 | 6.954632e-09 | 2.848087e-08 | UP | | ENSG00000234160 | LncEditing_218593 | READ | chr9_37510146_+ | 1.120791e+01 | 6.803589e+00 | 1.388600e+00 | 4.531074e+00 | 5.868470e-06 | 1.074500e-05 | UP | | ENSG00000234160 | LncEditing_218606 | READ | chr9_37510182_+ | 1.196981e+01 | 6.292412e+00 | 1.077918e+00 | 5.061209e+00 | 4.166066e-07 | 1.038498e-06 | UP | | ENSG00000234160 | LncEditing_218586 | LUAD | chr9_37510105_+ | 4.942261e+00 | 2.943010e+00 | 1.337115e+00 | 8.003667e+00 | 1.207673e-15 | 2.420937e-15 | UP | | ENSG00000234160 | LncEditing_218587 | LUAD | chr9_37510108_+ | 4.780832e+00 | 2.690054e+00 | 1.205361e+00 | 1.074535e+01 | 6.232434e-27 | 3.748116e-26 | UP | | ENSG00000234160 | LncEditing_218578 | STAD | chr9_37510065_+ | 5.380673e+00 | 3.024019e+00 | 1.202907e+00 | 7.363629e+00 | 1.789772e-13 | 3.791352e-13 | UP | | ENSG00000234160 | LncEditing_218586 | STAD | chr9_37510105_+ | 4.627072e+00 | 2.746774e+00 | 1.329148e+00 | 8.809662e+00 | 1.255243e-18 | 4.705517e-18 | UP | | ENSG00000234160 | LncEditing_218587 | STAD | chr9_37510108_+ | 4.432349e+00 | 2.224193e+00 | 1.005238e+00 | 1.144866e+01 | 2.387995e-30 | 4.885155e-29 | UP | | ENSG00000234160 | LncEditing_218593 | STAD | chr9_37510146_+ | 5.204217e+00 | 2.848211e+00 | 1.149921e+00 | 9.356457e+00 | 8.245512e-21 | 4.128522e-20 | UP | | ENSG00000234160 | LncEditing_218606 | STAD | chr9_37510182_+ | 5.293398e+00 | 2.757770e+00 | 1.063047e+00 | 9.398356e+00 | 5.542202e-21 | 2.804394e-20 | UP | | ENSG00000234160 | LncEditing_218608 | STAD | chr9_37510187_+ | 5.572886e+00 | 2.846582e+00 | 1.031785e+00 | 9.110555e+00 | 8.196194e-20 | 3.545906e-19 | UP | | ENSG00000234160 | LncEditing_218609 | STAD | chr9_37510217_+ | 5.787246e+00 | 3.022968e+00 | 1.067337e+00 | 6.933281e+00 | 4.111909e-12 | 7.676993e-12 | UP | | ENSG00000234160 | LncEditing_218578 | CESC | chr9_37510065_+ | 9.800645e+00 | 7.604775e+00 | 2.732457e+00 | 3.431247e+00 | 6.008122e-04 | 6.857325e-04 | UP | | ENSG00000234160 | LncEditing_218586 | CESC | chr9_37510105_+ | 9.150882e+00 | 6.900054e+00 | 2.455175e+00 | 4.725082e+00 | 2.300230e-06 | 3.214021e-06 | UP | | ENSG00000234160 | LncEditing_218593 | CESC | chr9_37510146_+ | 1.014959e+01 | 7.434969e+00 | 2.227059e+00 | 4.667541e+00 | 3.048258e-06 | 4.164139e-06 | UP | | ENSG00000234160 | LncEditing_218606 | CESC | chr9_37510182_+ | 1.128184e+01 | 6.161160e+00 | 1.145831e+00 | 9.240025e+00 | 2.464399e-20 | 2.356582e-19 | UP | | ENSG00000234160 | LncEditing_218608 | CESC | chr9_37510187_+ | 1.164412e+01 | 7.207984e+00 | 1.445226e+00 | 5.911306e+00 | 3.394060e-09 | 6.491140e-09 | UP | | ENSG00000234160 | LncEditing_218578 | PRAD | chr9_37510065_+ | 7.610217e+00 | 6.561169e+00 | 4.673229e+00 | 3.308162e+00 | 9.391032e-04 | 1.088255e-03 | UP | | ENSG00000234160 | LncEditing_218586 | PRAD | chr9_37510105_+ | 7.238597e+00 | 5.990222e+00 | 3.661653e+00 | 6.814281e+00 | 9.473667e-12 | 1.999620e-11 | UP | | ENSG00000234160 | LncEditing_218587 | PRAD | chr9_37510108_+ | 7.161174e+00 | 4.257879e+00 | 1.333224e+00 | 9.730865e+00 | 2.226907e-22 | 1.012386e-21 | UP | | ENSG00000234160 | LncEditing_218593 | PRAD | chr9_37510146_+ | 8.365779e+00 | 6.395658e+00 | 2.581264e+00 | 4.904232e+00 | 9.379347e-07 | 1.322958e-06 | UP | | ENSG00000234160 | LncEditing_218606 | PRAD | chr9_37510182_+ | 8.836464e+00 | 5.893673e+00 | 1.711443e+00 | 9.706291e+00 | 2.834660e-22 | 1.269154e-21 | UP | | ENSG00000234160 | LncEditing_218608 | PRAD | chr9_37510187_+ | 9.101663e+00 | 6.322572e+00 | 1.902520e+00 | 6.460688e+00 | 1.042282e-10 | 2.026279e-10 | UP | | ENSG00000234160 | LncEditing_218578 | BRCA | chr9_37510065_+ | 9.279533e+00 | 6.184782e+00 | 1.708440e+00 | 8.438577e+00 | 3.212236e-17 | 4.245992e-17 | UP | | ENSG00000234160 | LncEditing_218586 | BRCA | chr9_37510105_+ | 7.895666e+00 | 5.061296e+00 | 1.558715e+00 | 1.368194e+01 | 1.301752e-42 | 3.894542e-42 | UP | | ENSG00000234160 | LncEditing_218587 | BRCA | chr9_37510108_+ | 7.796119e+00 | 3.379372e+00 | 8.291868e-01 | 1.839684e+01 | 1.392527e-75 | 1.985033e-74 | UP | | ENSG00000234160 | LncEditing_218593 | BRCA | chr9_37510146_+ | 9.990486e+00 | 5.870418e+00 | 1.303625e+00 | 1.144594e+01 | 2.464294e-30 | 4.641300e-30 | UP | | ENSG00000234160 | LncEditing_218606 | BRCA | chr9_37510182_+ | 1.096924e+01 | 5.551803e+00 | 1.017879e+00 | 1.585374e+01 | 1.324617e-56 | 8.024971e-56 | UP | | ENSG00000234160 | LncEditing_218608 | BRCA | chr9_37510187_+ | 1.107835e+01 | 6.098110e+00 | 1.161023e+00 | 1.058622e+01 | 3.452391e-26 | 5.665662e-26 | UP | | ENSG00000234160 | LncEditing_218586 | PAAD | chr9_37510105_+ | 5.434005e+00 | 3.180132e+00 | 1.293779e+00 | 5.708767e+00 | 1.137975e-08 | 3.712228e-08 | UP | | ENSG00000234160 | LncEditing_218587 | PAAD | chr9_37510108_+ | 5.314680e+00 | 2.614880e+00 | 9.772899e-01 | 8.169541e+00 | 3.095646e-16 | 1.155708e-14 | UP | | ENSG00000234160 | LncEditing_218578 | ESCA | chr9_37510065_+ | 4.455908e+00 | 3.835373e+00 | 4.622083e+00 | 2.765637e+00 | 5.681180e-03 | 6.103410e-03 | UP | | ENSG00000234160 | LncEditing_218586 | ESCA | chr9_37510105_+ | 4.505264e+00 | 3.533206e+00 | 2.851979e+00 | 4.647772e+00 | 3.355399e-06 | 5.037905e-06 | UP | | ENSG00000234160 | LncEditing_218587 | ESCA | chr9_37510108_+ | 4.582948e+00 | 2.046240e+00 | 8.596233e-01 | 7.118637e+00 | 1.089996e-12 | 5.180569e-12 | UP | | ENSG00000234160 | LncEditing_218593 | ESCA | chr9_37510146_+ | 5.294520e+00 | 3.024233e+00 | 1.237730e+00 | 7.097133e+00 | 1.273713e-12 | 6.040051e-12 | UP | | ENSG00000234160 | LncEditing_218606 | ESCA | chr9_37510182_+ | 5.517697e+00 | 2.695013e+00 | 9.673295e-01 | 8.343378e+00 | 7.219788e-17 | 8.269222e-16 | UP | | ENSG00000234160 | LncEditing_218608 | ESCA | chr9_37510187_+ | 5.653744e+00 | 3.246558e+00 | 1.249538e+00 | 6.238762e+00 | 4.410486e-10 | 1.261170e-09 | UP | | ENSG00000234160 | LncEditing_218609 | ESCA | chr9_37510217_+ | 5.594292e+00 | 3.502823e+00 | 1.480522e+00 | 5.464885e+00 | 4.632077e-08 | 9.073675e-08 | UP | | ENSG00000234160 | LncEditing_218611 | ESCA | chr9_37510231_+ | 5.424563e+00 | 3.821302e+00 | 1.978463e+00 | 3.655629e+00 | 2.565523e-04 | 3.097544e-04 | UP |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value | | ENSG00000234160 | LncEditing_218578 | -4.890167e-01 | 3.288090e-10 | 7.135155e-08 | | ENSG00000234160 | LncEditing_218586 | -3.216134e-01 | 7.813324e-07 | 1.541356e-05 | | ENSG00000234160 | LncEditing_218589 | -4.664569e-01 | 2.549290e-04 | 7.902800e-04 | | ENSG00000234160 | LncEditing_218593 | -3.337112e-01 | 3.051405e-06 | 3.895029e-05 | | ENSG00000234160 | LncEditing_218609 | -3.917142e-01 | 3.266693e-04 | 9.515065e-04 | | ENSG00000234160 | LncEditing_218611 | -4.908162e-01 | 5.338559e-04 | 1.315475e-03 | | ENSG00000234160 | LncEditing_218619 | -4.316314e-01 | 1.533202e-04 | 5.572496e-04 | | ENSG00000234160 | LncEditing_218620 | -3.046356e-01 | 3.734154e-02 | 3.760146e-02 | | ENSG00000234160 | LncEditing_218593 | -4.214913e-01 | 1.347785e-04 | 2.402234e-04 | | ENSG00000234160 | LncEditing_218578 | -3.392928e-01 | 2.106814e-02 | 2.221731e-02 | | ENSG00000234160 | LncEditing_218586 | -3.368856e-01 | 4.412581e-05 | 2.812596e-04 | | ENSG00000234160 | LncEditing_218593 | -3.494068e-01 | 2.164081e-02 | 2.241369e-02 | | ENSG00000234160 | LncEditing_218578 | -3.943736e-01 | 1.661088e-03 | 5.695160e-03 | | ENSG00000234160 | LncEditing_218608 | -3.650346e-01 | 9.910197e-03 | 2.068215e-02 | | ENSG00000234160 | LncEditing_218578 | -4.455990e-01 | 7.337486e-04 | 1.956663e-03 | | ENSG00000234160 | LncEditing_218608 | -3.939982e-01 | 1.742415e-02 | 2.894180e-02 | | ENSG00000234160 | LncEditing_218586 | -3.336959e-01 | 7.442201e-07 | 7.293357e-06 | | ENSG00000234160 | LncEditing_218593 | -3.936442e-01 | 2.234865e-03 | 2.920223e-03 | | ENSG00000234160 | LncEditing_218608 | -5.803487e-01 | 1.534372e-05 | 6.744967e-05 | | ENSG00000234160 | LncEditing_218586 | -3.784120e-01 | 4.985741e-07 | 3.533018e-06 | | ENSG00000234160 | LncEditing_218593 | -3.215831e-01 | 8.464046e-03 | 9.193705e-03 | | ENSG00000234160 | LncEditing_218606 | -3.484704e-01 | 7.117820e-04 | 9.151483e-04 | | ENSG00000234160 | LncEditing_218578 | -3.692023e-01 | 3.164659e-02 | 3.484681e-02 | | ENSG00000234160 | LncEditing_218593 | -4.201986e-01 | 1.664480e-02 | 2.249504e-02 | | ENSG00000234160 | LncEditing_218593 | -3.809157e-01 | 7.476457e-04 | 2.220281e-03 | | ENSG00000234160 | LncEditing_218608 | -3.947991e-01 | 1.972256e-03 | 4.392752e-03 | | ENSG00000234160 | LncEditing_218578 | -3.335029e-01 | 2.053515e-02 | 2.981901e-02 | | ENSG00000234160 | LncEditing_218586 | -3.168183e-01 | 3.955684e-03 | 1.192513e-02 | | ENSG00000234160 | LncEditing_218608 | -3.924378e-01 | 4.007969e-03 | 1.192513e-02 | | ENSG00000234160 | LncEditing_218586 | -3.500391e-01 | 9.466812e-03 | 2.065486e-02 | | ENSG00000234160 | LncEditing_218586 | -5.100603e-01 | 4.048648e-04 | 2.510162e-03 | | ENSG00000234160 | LncEditing_218578 | -3.891079e-01 | 1.222722e-05 | 3.020843e-05 | | ENSG00000234160 | LncEditing_218608 | -3.403311e-01 | 5.674020e-04 | 7.541420e-04 | | ENSG00000234160 | LncEditing_218593 | -5.187658e-01 | 1.580800e-06 | 8.073369e-06 | | ENSG00000234160 | LncEditing_218608 | -4.203880e-01 | 3.972616e-04 | 6.529702e-04 | | ENSG00000234160 | LncEditing_218578 | -3.551052e-01 | 1.905507e-03 | 6.011639e-03 | | ENSG00000234160 | LncEditing_218586 | -3.411025e-01 | 6.050053e-06 | 1.431846e-04 | | ENSG00000234160 | LncEditing_218593 | -3.002258e-01 | 7.182767e-03 | 1.133281e-02 | | ENSG00000234160 | LncEditing_218608 | -5.757782e-01 | 6.437191e-07 | 4.570406e-05 |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000234160.1 | ENST00000413915.1 | 70 | 209 | 0 |
|
