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lncRNA: ENSG00000231948 |
Summary for HS1BP3-IT1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000231948 | Gene symbol | HS1BP3-IT1 |
| Gene name | HS1BP3 intronic transcript 1 | |
| HGNC | 41474 | |
| Entrez ID | 100874343 | |
| Gene type | sense_intronic | |
| Synonyms | HS1BP3-IT1|02p24.1 | |
| UniProtAcc |
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Structure and expression level for HS1BP3-IT1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000231948 | 1.286149e+02 | -4.406441e+00 | 5.130977e-01 | -8.587918e+00 | 8.860000e-18 | 3.230000e-16 | DOWN | CHOL |
| ENSG00000231948 | 3.638683e+01 | 1.411682e+00 | 1.724938e-01 | 8.183958e+00 | 2.750000e-16 | 1.320000e-15 | UP | KIRC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000231948 | -6.097959e-01 | 8.725545e-06 | CHOL | 7.005970e-05 |
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lncRNA-Protein interaction for HS1BP3-IT1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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