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lncRNA: ENSG00000231711 |
Summary for LINC00899 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000231711 | Gene symbol | LINC00899 |
| Gene name | long intergenic non-protein coding RNA 899 | |
| HGNC | 48583 | |
| Entrez ID | ||
| Gene type | processed_transcript | |
| Synonyms | LINC00899|22q13.31 | |
| UniProtAcc |
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Structure and expression level for LINC00899 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for LINC00899 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000231711 | ENST00000609737 | LINC00899 | ENSG00000167766 | ZNF83 | 23.94 | 94.6474 | P51522 | TF | ChIP-seq |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000231711 | ENST00000609737 | LINC00899 | ENSG00000100201 | DDX17 | 85.48 | 91.496 | Q92841 | RBP | NA |
| ENSG00000231711 | ENST00000609737 | LINC00899 | ENSG00000100650 | SRSF5 | 39.04 | 90.9337 | Q13243 | RBP | NA |
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