|
||||||
|
lncRNA: ENSG00000231683 |
Summary for RP1-27K12.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000231683 | Gene symbol | RP1-27K12.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | 101927136 | |
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
Top |
Structure and expression level for RP1-27K12.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000231683 | 3.165363e+02 | 4.185580e+00 | 5.754878e-01 | 7.273099e+00 | 3.510000e-13 | 3.680000e-12 | UP | HNSC |
| ENSG00000231683 | 1.225725e+03 | 5.738339e+00 | 1.091092e+00 | 5.259263e+00 | 1.450000e-07 | 5.480000e-06 | UP | ESCA |
| ENSG00000231683 | 1.395375e+03 | 7.616216e+00 | 4.636844e-01 | 1.642543e+01 | 1.260000e-60 | 4.460000e-59 | UP | LUSC |
| ENSG00000231683 | 3.013454e+02 | 6.242186e+00 | 5.511515e-01 | 1.132572e+01 | 9.790000e-30 | 1.900000e-28 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
Top |
lncRNA-Protein interaction for RP1-27K12.2 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
