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lncRNA: ENSG00000229656 |
Summary for ITGB1-DT |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000229656 | Gene symbol | ITGB1-DT |
| Gene name | ITGB1 divergent transcript | |
| HGNC | 53718 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ITGB1-DT|RP11-462L8.1|10p11.22 | |
| UniProtAcc |
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Structure and expression level for ITGB1-DT |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000229656 | 4.667273e+02 | 2.545519e+00 | 7.110711e-01 | 3.579837e+00 | 3.438080e-04 | 1.333273e-03 | UP | CHOL |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000229656 | 3.569352e-01 | 1.608899e-02 | CHOL | 1.789794e-02 |
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lncRNA-Protein interaction for ITGB1-DT |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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