|
||||||
|
lncRNA: ENSG00000229539 |
Summary for PANK2-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000229539 | Gene symbol | PANK2-AS1 |
| Gene name | PANK2 antisense RNA 1 | |
| HGNC | 40732 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | 20p13|RP11-119B16.2|PANK2-AS1 | |
| UniProtAcc |
Top |
Structure and expression level for PANK2-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000229539 | 1.904971e+01 | 1.066113e+00 | 3.584337e-01 | 2.974367e+00 | 2.935939e-03 | 8.908945e-03 | UP | CHOL |
| ENSG00000229539 | 3.936799e+01 | 1.238753e+00 | 2.195244e-01 | 5.642892e+00 | 1.670000e-08 | 2.210000e-07 | UP | BLCA |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000229539 | 5.529212e-01 | 8.189109e-05 | CHOL | 2.669396e-04 |
| ENSG00000229539 | -5.215282e-01 | 1.600910e-07 | KICH | 5.730691e-07 |
Top |
lncRNA-Protein interaction for PANK2-AS1 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
