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lncRNA: ENSG00000229512 |
Summary for AC068580.5 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000229512 | Gene symbol | AC068580.5 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | sense_intronic | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for AC068580.5 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000229512 | 2.303042e+01 | 1.281721e+00 | 1.510142e-01 | 8.487418e+00 | 2.110000e-17 | 1.090000e-16 | UP | KIRC |
| ENSG00000229512 | 6.724741e+01 | 2.508463e+00 | 1.793467e-01 | 1.398668e+01 | 1.880000e-44 | 1.900000e-42 | UP | KICH |
| ENSG00000229512 | 1.320411e+01 | 2.838275e+00 | 8.734436e-01 | 3.249523e+00 | 1.155986e-03 | 8.893181e-03 | UP | CESC |
| ENSG00000229512 | 2.536635e+01 | 1.114918e+00 | 1.919896e-01 | 5.807181e+00 | 6.350000e-09 | 3.920000e-08 | UP | KIRP |
| ENSG00000229512 | 1.781413e+01 | 1.880758e+00 | 1.551043e-01 | 1.212576e+01 | 7.710000e-34 | 9.170000e-33 | UP | BRCA |
| ENSG00000229512 | 1.891633e+01 | 1.160212e+00 | 1.591995e-01 | 7.287788e+00 | 3.150000e-13 | 1.930000e-12 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000229512 | 5.223243e-01 | 2.329091e-04 | CHOL | 5.615653e-04 |
| ENSG00000229512 | 5.608460e-01 | 1.088981e-08 | KICH | 5.913346e-08 |
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lncRNA-Protein interaction for AC068580.5 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000229512 | ENST00000446489 | AC068580.5 | ENSG00000167548 | KMT2D | 23.05 | 90.8101 | O14686 | Epi | NA |
| ENSG00000229512 | ENST00000446489 | AC068580.5 | ENSG00000165288 | BRWD3 | 27.32 | 94.2095 | Q6RI45 | Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000229512 | ENST00000446489 | AC068580.5 | ENSG00000167978 | SRRM2 | 9.24 | 95.6747 | Q9UQ35 | RBP | NA |
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