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lncRNA: ENSG00000228923 |
Summary for AP000355.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000228923 | Gene symbol | AP000355.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for AP000355.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000228923 | 5.492905e+01 | -4.896324e+00 | 1.035282e+00 | -4.729459e+00 | 2.250000e-06 | 1.390000e-05 | DOWN | CHOL |
| ENSG00000228923 | 3.855708e+01 | 1.695008e+00 | 1.962773e-01 | 8.635786e+00 | 5.830000e-18 | 3.130000e-17 | UP | KIRC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000228923 | -6.004202e-01 | 1.300124e-05 | CHOL | 8.141029e-05 |
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lncRNA-Protein interaction for AP000355.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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