 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | RPAP2,ARHGEF1,GSDMB,B3GNTL1,VAMP1,EPOR,STRN4,ERI2,MFSD8,ABHD17A,TMEM234,MCM7,CENPK,FASTKD3,CIRBP,RNF166,MZF1,C1orf56,DHX38,CNOT9,SIRT3,MAPK8IP3,TMUB1,SUGP2,PPP2R3B,DCLRE1C,MKNK1,OXSM,L3HYPDH,DMTF1,RNF34,ZDHHC23,ACD,FAM193A,UNKL,PIGG,LMBR1L,B3GAT3,ZNF24,HSDL1,USP36,PIGW,ULK3,PIGX,KMT2B,VPS39,IRAK4,SLC25A40,VMP1,ZFP14,CENATAC,NPEPL1,WDR5B,TP53INP1,ST7L,SAFB2,KCTD13,MSANTD2,TUBGCP6,CCDC14,FAM200A,RSF1,HIRIP3,CHKA,ACAD8,CLK4,MAEA,FAM133B,ZBED5,EIF2B5,RPAP1,SETD2,RECQL4,TTC14,KNTC1,SLC2A11,COG4,HMGXB3,GATD1,GKAP1,SUGP1,TAZ,SPG7,NAA80,DPY19L4,SIAH1,USP49,PPIP5K1,OGT,RCCD1,NOD1,SCML1,ARIH1,IGIP,CBX3,RAB4B,PDE7A,COX19,CLK2,MYEF2,BRSK1,RAPGEF6,ILKAP,MPLKIP,CHKB,CEP152,METTL17,CPSF7,SLC12A9,WDR83,OSGEP,ACAD10,CLK1,MRRF,ITGB3BP,GABPB1,NASP,RABL2A,DHPS,ARMC10,RPAIN,MOV10,OFD1,ACYP1,RFX7,SLC25A29,FCHSD1,TMEM243,IQGAP3,CC2D1B,KDM7A,CFAP298,XPNPEP3,MIS12,SKP2,NCOA6,HGS,ANO8,PFDN6,INO80E,FANCF,NAPB,C3orf62,NAA25,USP35,SETD5,C19orf54,ZFP62,MIS18BP1,SOCS4,C9orf72,ANAPC5,ZBED8,CHIC1,ORMDL1,BRAF,BAZ1A,C12orf73,DDX51,DONSON,AGER,MBD4,AGO3,ESS2,NFKBIZ,SPOUT1,TSC22D4,SRSF2,C1orf52,CDK11A,TECPR1,TFCP2,MRPL32,PASK,TES,LRRC37B,DHX35,ATG4B,NT5C3A,LMNTD2,DCUN1D2,NXF1,TSSK6,EIF2B1,UQCC1,FIGNL1,NR2C2,PAN2,BMF,FAM229A,LRTOMT,CCS,GIGYF1,FAM193B,PNKP,ABCA7,TMCO6,NOL3,SLC25A28,XPO1,COG7,SEC31B,CZIB,TMEM126B,ATG2B,ZFC3H1,MIOS,NFYB,ARHGAP33,DMAC2L,ATXN2L,DNASE1,TMEM184A,HEXD,HDAC8,DVL2,GAS8,VCPKMT,CEP192,SCNN1D,EIF4A1,CSNK2A2,MRPS25,ORC6,VPS13A,POLM,PALB2,ATF7IP,TMEM248,ERCC5,METTL18,MARCHF6,HSD17B7,IQCC,ZNF30,TMEM168,FAAP100,IST1,RAB28,FLVCR1,FANCL,ILF3,MED14,NUP54,GLI4,TTC17,DNAJC4,CDK13,LENG8,SH2B1,LCORL,PHKA2,PPP1R12C,C1orf159,DDX56,DGKA,PRR3,FAM98C,NICN1,CEP57,UBE2G2,INPPL1,GPC2,IP6K2,NEMP2,ARIH2,PIF1,PPWD1,DBF4,RELCH,ARMCX4,MLLT6,SASS6,RBM27,ATG12,ZNF70,FASTKD1,ICE2,AGK,ASTE1,EIF2B4,TMED4,C20orf96,PGAP1,PHF7,DDX55,COG8,ARFGAP1,MIX23,CASP2,CAPN10,KRIT1,AP1G2,GLMN,FAM111A,COG5,BANP,METTL21A,THOC1,ANKMY1,WDR59,UBA6,VPS50,TRNT1,TMEM175,NUMA1,FANCA,PHF12,GPN2,TNK2,ARHGAP27,KIAA1143,EZH2,REXO1,C2CD3,TAMM41,NBEAL2,CSNK1D,AP5M1,GDPD3,NECAB3,BORA,TMEM116,TMEM138,FGFR1OP2,PKD1,RIMKLB,LTO1,GRPEL2,PIDD1,LRRFIP2,METAP1D,AP5Z1,MEPCE,BCLAF3,DZIP1L,DNAJB14,ZCCHC9,PUS7L,NFYC,MCM9,CPSF4,ALS2CL,ZCCHC14,CEP83,NEK9,EP400,LIN54,UBN2,ANKDD1A,EXD3,NFKBID,LRIG2,PPP1R13B,P4HTM,PARP2,TBC1D10B,CABLES2,PCED1A,ABTB1,RTTN,NRBP2,SLX4,C11orf98,MECP2,SMYD4,IKBKB,NBPF11,LMF1,DYNLT2,BRF1,ACIN1,ZNF41,ZC3H8,TNRC18,PPP1R3F,DGKE,ENOSF1,TRAPPC6B,MAU2,DZIP3,RAB2B,ANKRD49,PAXBP1,DNAJC19,LEMD2,SLC38A9,PGBD1,GANC,FNTA,COA1,MOGS,GALT,FNBP4,PRMT7,LRRC56,CCHCR1,INPP5E,PLEKHA8,PHF11,RSRP1,SLC35C2,SGF29,IL11RA,CHD2,SF3A2,FLCN,CRACR2B,ATG14,CLEC2D,GOLGB1,FOXP1,PWWP2A,ZSWIM1,BCL7B,FIZ1,NBPF15,TRPT1,MYNN,METTL14,LTB4R,KIFC2,VPS4A,TSNARE1,OTUD4,ZNF720,CBLL1,HEMK1,UPF3B,LINS1,RABEP2,OGFR,PTOV1,PCSK4,ALKBH4,NCKAP5L,GSAP,RAB11FIP3,CLHC1,DDX11,PUS10,FRS3,TRIM4,GPBP1,NDUFAF5,C2orf68,FBXL8,GNRH1,AP4M1,GK5,NOL4L,RBM6,TOR1AIP2,TRMT13,KRTCAP2,ZNF862,LRWD1,PISD,SBF1,IDUA,ZFHX3,ARHGAP12,POP5,SMAD4,ZDHHC24,PAXIP1,NLRP1,VCPIP1,CNPY4,EPM2AIP1,UCKL1,TYW1,ABCB6,CHD1,PSME3IP1,WDR27,UBXN11,HECTD4,EME2,PTCD1,HARS2,KHDC4,CROCC,CERS5,EP400P1,USF2,PPP1R26,HPS4,NBPF1,PNISR,GEN1,AMT,ACAP3,CEPT1,AMH,CARD8,DMXL2,ENKD1,FAM3A,ATAD2B,ZNF10,SRSF7,LRRC14,NISCH,CLCN7,LRIF1,IFFO1,DUT,PLCG1,PSRC1,CEP63,TRMU,TMX3,CTBP1,BICRA,POMT1,ATXN7L2,PSMA2,SEM1,STMP1,POC5,ARF5,CHTF18,ADPGK,N4BP2,FAM214A,PHF19,AKAP8,CEP57L1,CDPF1,FANCG,METTL15,ARID2,FBXO41,ASPM,UIMC1,DPY19L2,UBE2J2,RNF44,TAF1D,KATNBL1,TAF4,C1orf35,PLEKHH1,CCDC174,CDK5RAP1,SPIN3,C7orf26,FOXRED1,MARCHF9,BUD23,TBRG1,SLX4IP,ZCWPW1,NPRL2,KLHDC4,KLHDC1,PBRM1,CCNL2,TET3,GATAD1,DHFR2,DCAKD,EFCAB7,FBXO46,DMPK,CLK3,RNPC3,C14orf28,BARD1,ANKRD10,TENT4A,INCA1,VPS9D1,SLC25A35,LRCH3,MNT,CNOT4,TFAP4,N6AMT1,BTBD19,KIAA2026,ZDHHC8,MSL3,LSM5,KMT2C,CCSAP,DDTL,SGSM3,SCAF4,INIP,MC1R,TYK2,COQ4,INTS1,CCNT2,POM121C,OSBPL7,STX10,KAT2A,UBE2W,ZNF91,CHD6,AGO2,CSTF3,ANKS6,TRAPPC11,CLDND1,XRCC2,RNPS1,RBM25,ENTR1,FBXW7,CEBPZOS,RHPN1,ENDOV,BBS10,ZFP30,BLCAP,SP4,CLDN15,SETD6,TMTC4,STX1A,POLI,LNPEP,PGAP2,PRPF39,ETNK1,ZNF34,ENTPD4,TRIM45,NDOR1,SGSH,TMEM41B,SRRM2,VPS41,GEMIN6,PSKH1,TENM1,ZNF22,PHF1,DDHD1,PABIR2,ZNF717,MAP4K5,CMTR2,GORAB,HDAC10,ATXN3,HEXIM2,FBXL20,CEP44,CENPC,HSF4,PROSER3,NOL9,ANKS3,ARGLU1,NOXA1,YJEFN3,CCNL1,SRPK2,RGL3,ANKRD54,SLC37A3,ANKRA2,SGSM2,VMAC,ORC5,KRI1,CELF1,SCMH1,TMEM60,TMEM161B,EPG5,KRR1,HSPBAP1,CRYGS,WRN,PRDM2,YAE1,RBL1,R3HDM2,LBHD1,QRICH1,FAM160A2,EGFL8,PSMG4,ZGPAT,TIA1,HOOK2,ZNF83,RANBP10,PPP4R3A,MOSMO,HCN3,ZNF3,CCDC18,RFX3,ZNF8,ZMYM3,DNMT3A,ABCD4,PTPN2,BRAT1,CRCP,MEN1,SAYSD1,NEIL1,FAM161A,SZT2,POLE,FAM13B,DTX3,GRIPAP1,ZMYND19,GIN1,ZCCHC10,NAT9,UBA7,CPNE1,STK4,ELF2,NDUFA5,PROCA1,CRAMP1,LUC7L,KLHL22,TMEM65,ZNF43,PTBP3,WDR6,URGCP,PNN,COA5,CDC14B,ERCC8,SACM1L,MAP2K7,UBE2V1,DGKD,MROH1,CENPJ,BBS4,C14orf93,LRSAM1,DPH7,SSBP1,CBX8,SNX13,TRA2A,MAPKAPK5,POLR3F,CEP131,KMT2A,DUS1L,PNPLA7,HINFP,XPA,PCBD2,NR2C1,BRD9,AMY2B,APBB3,CRELD1,NRIP2,CNTROB,FAM135A,WBP1,PARP16,RBM33,RAD17,AVL9,ZDHHC21,NADSYN1,NOL8,MOK,IMMP1L,CFAP44,LRCH4,SRRT,AGAP6,GGA3,WRAP73,RBM19,RELL2,BET1,MPHOSPH10,TAF6L,ADAMTS10,GTPBP2,MAPKBP1,TRIM66,SLC29A2,RBM39,SLC26A6,SLC25A27,PGS1,MSL2,IRF3,POT1,TMEM267,ZCCHC8,NRF1,TMEM44,RCC1L,ZNF2,RRNAD1,ZXDC,ESF1,GAK,KAT8,ICA1,PDS5A,PIGL,KCTD6,GBA2,CSAD,AGAP3,LRRC37A3,KIAA0895L,ARV1,NDUFAF6,ATRX,SAMD10,MUTYH,RBM28,BANF1,C2CD5,LAMA5,ABCA5,PHYKPL,TMEM259,POFUT2,CACTIN,EME1,ZBTB5,CAAP1,RUFY3,LIN37,OGA,ZFP69,NUP42,IFT27,ZNHIT1,PHKG2,MED28,NARF,ZC3HC1,BUD31,NIPSNAP3B,CLASP2,POLR2J,COPS5,SS18L2,TBC1D17,DCAF16,GOLGA1,ZC3H4,QSOX2,BCAP29,MED31,MINDY2,RICTOR,TM2D3,CENPT,PACS2,CHORDC1,CRLS1,RBM4,TRIM3,SCLT1,MTG1,FAM76B,ANAPC7,YAF2,RBMX,RBM4B,TSC2,DTWD1,VPS29,EXOG,ANAPC2,CCDC102A,C21orf58,TAF1C,RBM14,H2AZ2,ADNP,ADAT2,MAP3K12,NCOA5,TMEM143,MBD1,GABRE,IKZF4,MYO19,TRAPPC14,AAAS,SLC38A6,PRIMPOL,CAPN15,CNKSR1,THAP9,RAB22A,HMGB2,MRNIP,MPV17,THAP6,ELMOD3,DDX17,E2F5,TMEM129,GSTM2,ING4,SLC7A6,HAUS5,CHFR,RSBN1L,FMR1,RAD52,CEP43,GALNT11,ARVCF,NINL,CTDSPL2,GOLGA3,FBXL12,SDR39U1,PGGHG,MCM8,TELO2,PNPLA8,CDAN1,TMEM107,TEDC1,ERV3-1,PCYOX1L,ATAD5,C12orf76,ANO9,RSPRY1,WASHC1,PDAP1,USP21,ABCC5,TIGD1,KLC1,NSD2,DNA2,GPS2,TRIM52,PCBP4,DUS4L,NOL12,MTFR1L,MOSPD3,CLASRP,DFFB,CCDC93,LMBR1,MBD6,CPT1B,TTC32,MICAL1,BAHCC1,MTX3,ZMAT1,GOLGA8B,SPATA20,UBAP2,MCM3AP,SPATA33,ALPK1,ACP6,STRADA,ZFX,SMG9,ZNF18,NKRF,DIDO1,GOLGA8A,CYP2R1,RABGAP1,PAM16,PPHLN1,FKTN,SETD4,SPIRE2,CEP41,TPRKB,SPATA24,RFX1,RBM48,PSMC3IP,AARSD1,GMEB2,DUSP28,TYW5,RBM5,USP3,AXIN1,NKTR,YPEL3,SAP30BP,MKRN1,BCDIN3D,ZCCHC7,C19orf71,ZNF17,TTLL3,DOT1L,CRBN,ZNF84,PARP6,PDCD6,NUDT17,PRPF40B,FRYL,PIAS2,LRP5L,KATNIP,ASXL1,TSC1,DENND4B,NGLY1,FASTK,SIRT6,COLCA2,MACROH2A1,MAN2C1,DXO,USPL1,CCDC112,LZTR1,USP20,ANKRD13D,WHAMM,LIG1,NELFA,INTS4,CCDC57,TET2,RABL2B,TRAPPC2,LRRC45,KBTBD2,SIRT7,MRFAP1L1 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | RBM27,E2F5,SGSM3,GK5,USP42,C14orf93,YDJC,DPH7,RP9,CCDC174,VPS4A,DNASE1,RBM4,MOGS,GTF2H4,ZNF18,MECP2,CCSAP,COG4,SETD2,ZMAT1,CNPY4,MEPCE,WDR60,DHPS,PLXNA3,PGS1,HAUS5,DMPK,DGCR8,REST,USP36,PISD,CCDC18,FANCA,ZNF3,CBFB,RAD52,ALPK1,GORAB,SPIRE2,TNRC18,FASTKD1,ZNF70,ACP6,NCOA6,OXLD1,PDDC1,UHRF2,RPAP1,ABCA5,PLK4,STX16,TRMU,VARS2,SPATA25,GALNT11,HEMK1,ZMIZ2,METTL17,ZFP14,EP400NL,IST1,PGAP1,C1orf56,CCZ1,RINT1,UBA7,TIA1,MSL2,RBM5,E4F1,KLHDC4,NICN1,PARP2,PDCD6,C9orf114,ING4,ZNF487,IL3RA,RGL3,PRPF40B,SETD6,COA1,ZNF720,MYNN,URGCP,RBM19,ZNF83,LBHD1,AP1G2,EVL,FBXL20,MPLKIP,TET2,GABRE,RSPRY1,PRPF3,LRWD1,ALKBH4,FAM133B,CELF1,ENOSF1,SHFM1,ZC3H6,ZCWPW1,LCORL,CLASRP,DOT1L,MAPK8IP3,SDR39U1,GAS2L3,TMCO6,XRCC2,SIN3B,CCDC66,MZF1,RAD9A,MPHOSPH10,CENPJ,NOL3,C3orf62,FAM160B2,ZSWIM1,BANF1,MCM7,FAM122B,C2CD5,TMEM120B,RALGPS1,CEP78,FBXO46,ZFP2,KIAA0907,TMEM44,TFAP4,STRADA,CPNE1,PRR14,TRAF5,PSMA2,TBKBP1,MAU2,CRTC1,SETD4,ZFHX3,ZFP30,NFX1,ACCS,ENGASE,CHFR,C2orf68,MAVS,GRIPAP1,NUMA1,BDP1,LEMD2,GGA1,XPNPEP3,CCDC130,NEU3,MAGEF1,SLC38A9,POT1,MOB1B,FANCG,ABCD4,CDK13,SMG9,HSF4,C21orf59,FAM111A,MFSD8,COMMD3,SUGP1,MIOS,C1orf112,ING5,TENM1,PTCD1,CCNL1,PHF19,CEP135,NUPL2,C19orf54,SLC25A35,TFCP2,FAM192A,LRRC37A3,SRPK2,POMT1,AARSD1,SUN1,CPSF7,TMEM248,TMX3,SENP5,TECPR1,INTS1,SLX4,PPP1R12C,GANC,RBM6,FKTN,PCBD2,ZMYND19,COG7,C18orf25,ARGLU1,MED28,ATAD5,KIAA0556,MCM3AP,MDM4,CIRBP,CDAN1,TAZ | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | PCYOX1,SLC66A2,RNH1,MRPL37,PSMD2,PSMD8,HSPA8,NTMT1,HPS6,AP2M1,OPTN,NUCB1,ATP5F1B,ORAI1,SARS1,CLPP,CAP1,CLTC,ILRUN | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000228393 | ENST00000445184 | exon_skip_470077 | chr7:102397619-102397698 | -7.75 | -0.1062 | PRKRIP1 | ENST00000397912,ENST00000496391 | Frame-shift |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000228393 | ENST00000445184 | exon_skip_52671 | chr10:97461495-97461622 | -16.54 | -0.2121 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_66482 | chr11:126274926-126275021 | -12.00 | -0.1690 | FOXRED1 | ENST00000263578 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_111863 | chr14:23565815-23565892 | -10.15 | -0.1430 | AP1G2 | ENST00000308724,ENST00000397120 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_382458 | chr3:38131595-38131638 | -5.99 | -0.7488 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_436035 | chr5:79656957-79657001 | -5.58 | -0.5580 | TENT2 | ENST00000296783,ENST00000428308,ENST00000453514 | Frame-shift | | ENSG00000228393 | ENST00000450686 | exon_skip_470226 | chr7:103307595-103307708 | -9.74 | -0.1133 | PMPCB | ENST00000249269 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_41813 | chr10:68337857-68337996 | -12.54 | -0.1194 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_309204 | chr19:49181348-49181461 | -12.04 | -0.1338 | TRPM4 | ENST00000252826 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_340759 | chr2:85552415-85552567 | -12.01 | -0.1226 | GGCX | ENST00000233838 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_9446 | chr1:147270931-147271005 | -8.30 | -0.1804 | CHD1L | ENST00000369258 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_38175 | chr1:234398381-234398553 | -7.74 | -0.1191 | TARBP1 | ENST00000040877 | Frame-shift | | ENSG00000228393 | ENST00000450686 | exon_skip_52701 | chr10:97468965-97469104 | -13.20 | -0.1333 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_53559 | chr10:101793912-101793998 | -8.93 | -0.1076 | OGA | ENST00000361464 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_92074 | chr12:50142052-50142110 | -5.90 | -0.1405 | CERS5 | ENST00000317551 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_114365 | chr14:74290026-74290118 | -11.83 | -0.1497 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_133217 | chr16:8635038-8635079 | -7.64 | -0.2011 | METTL22 | ENST00000381920 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_290158 | chr17:42953723-42953778 | -8.48 | -0.4038 | AARSD1 | ENST00000427569 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_300663 | chr19:1425877-1425960 | -9.88 | -0.1937 | DAZAP1 | ENST00000233078 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_319223 | chr19:43526200-43526349 | -15.35 | -0.1849 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_326885 | chr2:74490024-74490127 | -11.94 | -0.1492 | TTC31 | ENST00000233623 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_327433 | chr2:86125794-86125880 | -7.74 | -0.1090 | PTCD3 | ENST00000254630 | Frame-shift | | ENSG00000228393 | ENST00000450686 | exon_skip_327748 | chr2:95410863-95411026 | -13.77 | -0.1005 | FAHD2A | ENST00000233379,ENST00000447036 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_358821 | chr20:63943652-63943669 | -4.31 | -0.4789 | UCKL1 | ENST00000354216 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_370518 | chr22:50247691-50247776 | -10.48 | -0.1941 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_377198 | chr3:123130479-123130616 | -13.31 | -0.1372 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000228393 | ENST00000450686 | exon_skip_442657 | chr5:74730259-74730398 | -8.90 | -0.1141 | GFM2 | ENST00000296805,ENST00000509430 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_462144 | chr6:125298713-125298816 | -8.82 | -0.1378 | HDDC2 | ENST00000398153 | Frame-shift | | ENSG00000228393 | ENST00000445184 | exon_skip_509943 | chrX:47175018-47175092 | -11.20 | -0.5333 | RBM10 | ENST00000377604 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name | | LncEditing_189985 | ENSG00000228393.3 | chr7 | 104986668 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_189989 | ENSG00000228393.3 | chr7 | 104986673 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190007 | ENSG00000228393.3 | chr7 | 104987397 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190011 | ENSG00000228393.3 | chr7 | 104987421 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190061 | ENSG00000228393.3 | chr7 | 104989220 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190063 | ENSG00000228393.3 | chr7 | 104989226 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190099 | ENSG00000228393.3 | chr7 | 104991102 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190195 | ENSG00000228393.3 | chr7 | 104993150 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190367 | ENSG00000228393.3 | chr7 | 105001939 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190529 | ENSG00000228393.3 | chr7 | 105006995 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190535 | ENSG00000228393.3 | chr7 | 105007001 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190541 | ENSG00000228393.3 | chr7 | 105007030 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190543 | ENSG00000228393.3 | chr7 | 105007031 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190551 | ENSG00000228393.3 | chr7 | 105007071 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190567 | ENSG00000228393.3 | chr7 | 105007529 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190573 | ENSG00000228393.3 | chr7 | 105007564 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190585 | ENSG00000228393.3 | chr7 | 105007622 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190607 | ENSG00000228393.3 | chr7 | 105007736 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190613 | ENSG00000228393.3 | chr7 | 105007750 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190615 | ENSG00000228393.3 | chr7 | 105007757 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190627 | ENSG00000228393.3 | chr7 | 105007818 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190631 | ENSG00000228393.3 | chr7 | 105007826 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190655 | ENSG00000228393.3 | chr7 | 105007887 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190661 | ENSG00000228393.3 | chr7 | 105007909 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190663 | ENSG00000228393.3 | chr7 | 105007910 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190665 | ENSG00000228393.3 | chr7 | 105007918 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190701 | ENSG00000228393.3 | chr7 | 105008642 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 | | LncEditing_190723 | ENSG00000228393.3 | chr7 | 105008720 | - | antisense | LINC01004 | ENST00000450686.1 | antisense | LINC01004-001 |
| Edited-associated DElncRNAs in cancer. |
 |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change | | ENSG00000228393 | LncEditing_189989 | KICH | chr7_104986673_- | 2.819296e+00 | 1.870545e+00 | 1.689542e+00 | 2.806714e+00 | 5.004963e-03 | 7.691451e-03 | UP | | ENSG00000228393 | LncEditing_190367 | LAML | chr7_105001939_- | 6.315300e+00 | 4.540971e+00 | 2.101500e+00 | 4.366601e+00 | 1.261948e-05 | 2.343618e-05 | UP | | ENSG00000228393 | LncEditing_189985 | OV | chr7_104986668_- | 2.661434e+00 | 1.798040e+00 | 1.767477e+00 | 4.366046e+00 | 1.265160e-05 | 1.534716e-05 | UP | | ENSG00000228393 | LncEditing_189989 | OV | chr7_104986673_- | 2.505572e+00 | 1.551759e+00 | 1.446685e+00 | 7.333815e+00 | 2.236926e-13 | 5.294346e-13 | UP | | ENSG00000228393 | LncEditing_190007 | OV | chr7_104987397_- | 2.296943e+00 | 1.724236e+00 | 2.416874e+00 | 5.256433e+00 | 1.468760e-07 | 2.018721e-07 | UP | | ENSG00000228393 | LncEditing_190529 | OV | chr7_105006995_- | 2.733281e+00 | 1.688616e+00 | 1.439279e+00 | 6.183471e+00 | 6.270715e-10 | 1.057967e-09 | UP | | ENSG00000228393 | LncEditing_190535 | OV | chr7_105007001_- | 2.456460e+00 | 1.787501e+00 | 2.180376e+00 | 5.063071e+00 | 4.125565e-07 | 5.533854e-07 | UP | | ENSG00000228393 | LncEditing_190541 | OV | chr7_105007030_- | 2.853810e+00 | 1.616404e+00 | 1.219361e+00 | 8.094326e+00 | 5.758249e-16 | 1.727475e-15 | UP | | ENSG00000228393 | LncEditing_190543 | OV | chr7_105007031_- | 2.799825e+00 | 1.432767e+00 | 1.034626e+00 | 9.937350e+00 | 2.863424e-23 | 1.732183e-22 | UP | | ENSG00000228393 | LncEditing_190551 | OV | chr7_105007071_- | 2.820826e+00 | 1.764694e+00 | 1.477762e+00 | 5.152662e+00 | 2.568142e-07 | 3.485471e-07 | UP | | ENSG00000228393 | LncEditing_190567 | OV | chr7_105007529_- | 2.613217e+00 | 1.673531e+00 | 1.555376e+00 | 6.820987e+00 | 9.041708e-12 | 1.811296e-11 | UP | | ENSG00000228393 | LncEditing_190573 | OV | chr7_105007564_- | 2.718884e+00 | 1.718027e+00 | 1.509977e+00 | 5.607632e+00 | 2.051132e-08 | 3.032180e-08 | UP | | ENSG00000228393 | LncEditing_190585 | OV | chr7_105007622_- | 2.738564e+00 | 1.763612e+00 | 1.575086e+00 | 5.553116e+00 | 2.806224e-08 | 4.081171e-08 | UP | | ENSG00000228393 | LncEditing_190613 | OV | chr7_105007750_- | 2.571630e+00 | 1.462194e+00 | 1.227675e+00 | 9.188495e+00 | 3.983771e-20 | 1.854723e-19 | UP | | ENSG00000228393 | LncEditing_190627 | OV | chr7_105007818_- | 2.594976e+00 | 1.669346e+00 | 1.571243e+00 | 6.954943e+00 | 3.527045e-12 | 7.421323e-12 | UP | | ENSG00000228393 | LncEditing_190631 | OV | chr7_105007826_- | 2.538732e+00 | 1.703690e+00 | 1.737784e+00 | 5.963098e+00 | 2.475002e-09 | 3.940718e-09 | UP | | ENSG00000228393 | LncEditing_190661 | OV | chr7_105007909_- | 3.015325e+00 | 1.762173e+00 | 1.290393e+00 | 5.923883e+00 | 3.144264e-09 | 4.954842e-09 | UP | | ENSG00000228393 | LncEditing_190663 | OV | chr7_105007910_- | 3.253889e+00 | 1.651716e+00 | 1.022287e+00 | 7.647673e+00 | 2.046483e-14 | 5.399543e-14 | UP | | ENSG00000228393 | LncEditing_189985 | STAD | chr7_104986668_- | 2.611556e+00 | 1.396341e+00 | 1.107103e+00 | 6.293596e+00 | 3.101952e-10 | 4.996620e-10 | UP | | ENSG00000228393 | LncEditing_189989 | STAD | chr7_104986673_- | 2.295136e+00 | 1.232513e+00 | 1.114856e+00 | 8.783369e+00 | 1.586498e-18 | 5.867809e-18 | UP | | ENSG00000228393 | LncEditing_190007 | STAD | chr7_104987397_- | 2.241628e+00 | 1.258630e+00 | 1.200924e+00 | 7.746331e+00 | 9.458603e-15 | 2.238797e-14 | UP | | ENSG00000228393 | LncEditing_190011 | STAD | chr7_104987421_- | 1.908318e+00 | 1.528367e+00 | 3.121967e+00 | 3.808681e+00 | 1.397098e-04 | 1.569133e-04 | UP | | ENSG00000228393 | LncEditing_190529 | STAD | chr7_105006995_- | 2.417636e+00 | 1.346925e+00 | 1.184936e+00 | 6.621342e+00 | 3.559532e-11 | 6.163543e-11 | UP | | ENSG00000228393 | LncEditing_190535 | STAD | chr7_105007001_- | 2.273129e+00 | 1.393372e+00 | 1.416233e+00 | 6.001704e+00 | 1.952577e-09 | 2.946354e-09 | UP | | ENSG00000228393 | LncEditing_190541 | STAD | chr7_105007030_- | 2.270463e+00 | 1.264515e+00 | 1.184270e+00 | 7.735003e+00 | 1.034007e-14 | 2.435360e-14 | UP | | ENSG00000228393 | LncEditing_190543 | STAD | chr7_105007031_- | 2.195093e+00 | 1.198276e+00 | 1.145054e+00 | 8.342498e+00 | 7.273739e-17 | 2.147628e-16 | UP | | ENSG00000228393 | LncEditing_190551 | STAD | chr7_105007071_- | 2.647196e+00 | 1.385987e+00 | 1.071178e+00 | 5.728522e+00 | 1.013092e-08 | 1.447853e-08 | UP | | ENSG00000228393 | LncEditing_190567 | STAD | chr7_105007529_- | 2.507849e+00 | 1.329719e+00 | 1.092503e+00 | 6.913414e+00 | 4.731269e-12 | 8.776136e-12 | UP | | ENSG00000228393 | LncEditing_190573 | STAD | chr7_105007564_- | 2.471844e+00 | 1.414735e+00 | 1.242150e+00 | 5.461093e+00 | 4.732112e-08 | 6.453699e-08 | UP | | ENSG00000228393 | LncEditing_190585 | STAD | chr7_105007622_- | 2.635009e+00 | 1.392137e+00 | 1.086358e+00 | 5.531942e+00 | 3.167049e-08 | 4.360782e-08 | UP | | ENSG00000228393 | LncEditing_190607 | STAD | chr7_105007736_- | 2.469055e+00 | 1.428428e+00 | 1.266576e+00 | 5.452405e+00 | 4.969299e-08 | 6.738671e-08 | UP | | ENSG00000228393 | LncEditing_190613 | STAD | chr7_105007750_- | 2.049608e+00 | 1.157690e+00 | 1.213447e+00 | 7.948823e+00 | 1.882913e-15 | 4.902420e-15 | UP | | ENSG00000228393 | LncEditing_190615 | STAD | chr7_105007757_- | 1.764084e+00 | 1.557969e+00 | 5.578709e+00 | 2.199436e+00 | 2.784694e-02 | 2.806250e-02 | UP | | ENSG00000228393 | LncEditing_190627 | STAD | chr7_105007818_- | 2.203394e+00 | 1.188708e+00 | 1.123176e+00 | 8.750425e+00 | 2.125515e-18 | 7.674664e-18 | UP | | ENSG00000228393 | LncEditing_190631 | STAD | chr7_105007826_- | 2.266270e+00 | 1.204468e+00 | 1.096583e+00 | 8.364548e+00 | 6.034576e-17 | 1.811638e-16 | UP | | ENSG00000228393 | LncEditing_190701 | STAD | chr7_105008642_- | 2.312201e+00 | 1.498610e+00 | 1.598357e+00 | 2.271699e+00 | 2.310471e-02 | 2.346521e-02 | UP | | ENSG00000228393 | LncEditing_190723 | STAD | chr7_105008720_- | 2.117279e+00 | 1.457985e+00 | 1.857924e+00 | 2.995462e+00 | 2.740293e-03 | 2.898153e-03 | UP | | ENSG00000228393 | LncEditing_189985 | ESCA | chr7_104986668_- | 2.636712e+00 | 1.812626e+00 | 1.849596e+00 | 2.983238e+00 | 2.852165e-03 | 3.149704e-03 | UP | | ENSG00000228393 | LncEditing_189989 | ESCA | chr7_104986673_- | 2.600605e+00 | 1.402983e+00 | 1.123154e+00 | 5.797108e+00 | 6.746831e-09 | 1.506002e-08 | UP | | ENSG00000228393 | LncEditing_190007 | ESCA | chr7_104987397_- | 2.623145e+00 | 1.557941e+00 | 1.330394e+00 | 4.917729e+00 | 8.755392e-07 | 1.418184e-06 | UP | | ENSG00000228393 | LncEditing_190011 | ESCA | chr7_104987421_- | 2.953493e+00 | 1.838682e+00 | 1.462522e+00 | 2.945690e+00 | 3.222351e-03 | 3.539857e-03 | UP | | ENSG00000228393 | LncEditing_190061 | ESCA | chr7_104989220_- | 3.162399e+00 | 1.774312e+00 | 1.199387e+00 | 4.535916e+00 | 5.735411e-06 | 8.330853e-06 | UP | | ENSG00000228393 | LncEditing_190063 | ESCA | chr7_104989226_- | 2.878918e+00 | 1.780489e+00 | 1.442476e+00 | 4.223104e+00 | 2.409602e-05 | 3.231302e-05 | UP | | ENSG00000228393 | LncEditing_190099 | ESCA | chr7_104991102_- | 3.823146e+00 | 1.656963e+00 | 8.290371e-01 | 6.347630e+00 | 2.186573e-10 | 6.537886e-10 | UP | | ENSG00000228393 | LncEditing_190195 | ESCA | chr7_104993150_- | 3.328946e+00 | 1.673764e+00 | 1.008096e+00 | 5.931568e+00 | 3.000555e-09 | 7.228924e-09 | UP | | ENSG00000228393 | LncEditing_190367 | ESCA | chr7_105001939_- | 3.446434e+00 | 1.785266e+00 | 1.053779e+00 | 5.082418e+00 | 3.726594e-07 | 6.376278e-07 | UP | | ENSG00000228393 | LncEditing_190529 | ESCA | chr7_105006995_- | 2.663003e+00 | 1.741153e+00 | 1.631292e+00 | 4.267942e+00 | 1.972846e-05 | 2.669520e-05 | UP | | ENSG00000228393 | LncEditing_190541 | ESCA | chr7_105007030_- | 2.592883e+00 | 1.604123e+00 | 1.443476e+00 | 4.845070e+00 | 1.265669e-06 | 2.005172e-06 | UP | | ENSG00000228393 | LncEditing_190543 | ESCA | chr7_105007031_- | 2.545173e+00 | 1.542319e+00 | 1.383773e+00 | 4.866989e+00 | 1.133113e-06 | 1.806087e-06 | UP | | ENSG00000228393 | LncEditing_190551 | ESCA | chr7_105007071_- | 3.109679e+00 | 1.786294e+00 | 1.250318e+00 | 4.747189e+00 | 2.062629e-06 | 3.209555e-06 | UP | | ENSG00000228393 | LncEditing_190567 | ESCA | chr7_105007529_- | 3.129946e+00 | 1.683034e+00 | 1.117227e+00 | 5.713713e+00 | 1.105376e-08 | 2.366566e-08 | UP | | ENSG00000228393 | LncEditing_190573 | ESCA | chr7_105007564_- | 3.014064e+00 | 1.817092e+00 | 1.369716e+00 | 3.881767e+00 | 1.037003e-04 | 1.297647e-04 | UP | | ENSG00000228393 | LncEditing_190585 | ESCA | chr7_105007622_- | 3.313726e+00 | 1.808346e+00 | 1.144448e+00 | 4.205489e+00 | 2.605182e-05 | 3.480217e-05 | UP | | ENSG00000228393 | LncEditing_190613 | ESCA | chr7_105007750_- | 2.336474e+00 | 1.539253e+00 | 1.660846e+00 | 4.241886e+00 | 2.216489e-05 | 2.979962e-05 | UP | | ENSG00000228393 | LncEditing_190627 | ESCA | chr7_105007818_- | 2.411059e+00 | 1.506494e+00 | 1.473900e+00 | 4.503492e+00 | 6.684600e-06 | 9.615940e-06 | UP | | ENSG00000228393 | LncEditing_190631 | ESCA | chr7_105007826_- | 2.359576e+00 | 1.726598e+00 | 2.219284e+00 | 3.207907e+00 | 1.337046e-03 | 1.506692e-03 | UP | | ENSG00000228393 | LncEditing_190655 | ESCA | chr7_105007887_- | 3.303388e+00 | 1.680808e+00 | 1.025860e+00 | 6.118773e+00 | 9.429838e-10 | 2.517827e-09 | UP | | ENSG00000228393 | LncEditing_190661 | ESCA | chr7_105007909_- | 3.447877e+00 | 1.722502e+00 | 9.987984e-01 | 5.712335e+00 | 1.114362e-08 | 2.378516e-08 | UP | | ENSG00000228393 | LncEditing_190663 | ESCA | chr7_105007910_- | 3.287603e+00 | 1.577430e+00 | 9.438775e-01 | 7.288355e+00 | 3.137630e-13 | 1.664930e-12 | UP | | ENSG00000228393 | LncEditing_190665 | ESCA | chr7_105007918_- | 3.378846e+00 | 1.686661e+00 | 9.976446e-01 | 6.040337e+00 | 1.537931e-09 | 3.940713e-09 | UP | | ENSG00000228393 | LncEditing_190723 | ESCA | chr7_105008720_- | 2.802732e+00 | 1.934944e+00 | 1.870760e+00 | 3.394836e+00 | 6.866981e-04 | 7.952040e-04 | UP |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value | | ENSG00000228393 | LncEditing_190535 | -3.444965e-01 | 1.000842e-02 | 1.233993e-02 | | ENSG00000228393 | LncEditing_190567 | -3.192294e-01 | 2.902261e-03 | 4.665116e-03 | | ENSG00000228393 | LncEditing_190585 | -4.663432e-01 | 9.533937e-04 | 1.989293e-03 | | ENSG00000228393 | LncEditing_190011 | -4.340400e-01 | 1.305463e-03 | 2.464324e-03 | | ENSG00000228393 | LncEditing_190541 | -3.085080e-01 | 6.766213e-04 | 1.561093e-03 | | ENSG00000228393 | LncEditing_190543 | -3.702120e-01 | 4.943466e-06 | 6.463124e-05 | | ENSG00000228393 | LncEditing_190615 | -3.392690e-01 | 2.794840e-02 | 2.884732e-02 | | ENSG00000228393 | LncEditing_190665 | 3.658646e-01 | 3.626807e-02 | 4.073392e-02 |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000228393 | ENSG00000005075 | POLR2J | ACC,CHOL,KICH,KIRP,LGG,PAAD,THCA | KICH,KIRP | | | ENSG00000228393 | ENSG00000006634 | DBF4 | ACC,CHOL,DLBC,GBM,KICH,KIRC,LGG,READ,SKCM,THYM,UCEC | KICH | | | ENSG00000228393 | ENSG00000007545 | CRAMP1 | ACC,BLCA,CHOL,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,THCA,UCS | CHOL | | | ENSG00000228393 | ENSG00000013441 | CLK1 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000046651 | OFD1 | ACC,BLCA,CESC,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LGG,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000047634 | SCML1 | ACC,BRCA,COAD,KICH,KIRC,KIRP,PAAD,SKCM,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000060491 | OGFR | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA | KIRC | | | ENSG00000228393 | ENSG00000062716 | VMP1 | ACC,COAD,ESCA,KIRC,KIRP,PAAD,SKCM,STAD,UCEC | KIRC,KIRP | | | ENSG00000228393 | ENSG00000076928 | ARHGEF1 | ACC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,THYM | CHOL,KIRC | | | ENSG00000228393 | ENSG00000091651 | ORC6 | ACC,CHOL,DLBC,GBM,LGG,THYM | CHOL | | | ENSG00000228393 | ENSG00000100288 | CHKB | ACC,BLCA,BRCA,CHOL,ESCA,GBM,KICH,KIRC,KIRP,LGG,PAAD,READ,SKCM,STAD,THCA,UCS | KIRC | | | ENSG00000228393 | ENSG00000100429 | HDAC10 | ACC,BLCA,CHOL,GBM,KIRC,KIRP,LGG,PAAD,READ,SKCM,THCA | KIRC,KIRP | | | ENSG00000228393 | ENSG00000102125 | TAZ | ACC,BLCA,BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,SKCM,TGCT,THCA,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000102977 | ACD | ACC,CHOL,GBM,KIRP,LGG,PAAD | CHOL | | | ENSG00000228393 | ENSG00000103126 | AXIN1 | ACC,CHOL,DLBC,KICH,KIRP,LGG | KIRP | | | ENSG00000228393 | ENSG00000104859 | CLASRP | ACC,BLCA,BRCA,CHOL,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,THCA,THYM | KIRC | | | ENSG00000228393 | ENSG00000105771 | SMG9 | ACC,CHOL,KICH,KIRC,KIRP,LGG | CHOL,KICH | | | ENSG00000228393 | ENSG00000106089 | STX1A | ACC,KIRP,OV,PAAD,UCS | KIRP | | | ENSG00000228393 | ENSG00000106144 | CASP2 | ACC,CHOL,GBM,KIRP,LAML,LGG,OV,READ,TGCT,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000106462 | EZH2 | ACC,CHOL,GBM,KIRC,KIRP,LGG,READ,SKCM,THYM | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000108773 | KAT2A | ACC,BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,THCA,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000109685 | NSD2 | ACC,CHOL,GBM,KIRC,KIRP,TGCT,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000113108 | APBB3 | ACC,BLCA,BRCA,CESC,DLBC,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,TGCT,THCA,UCS | KIRC | | | ENSG00000228393 | ENSG00000113240 | CLK4 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000113648 | MACROH2A1 | ACC,CESC,CHOL,LGG,PAAD,TGCT,THYM | CHOL | | | ENSG00000228393 | ENSG00000117616 | RSRP1 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000119640 | ACYP1 | ACC,BRCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,PAAD,READ,TGCT,THCA,THYM | CHOL | | | ENSG00000228393 | ENSG00000123219 | CENPK | ACC,CHOL,COAD,GBM,SKCM,THYM | CHOL | | | ENSG00000228393 | ENSG00000127586 | CHTF18 | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,THCA,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000132522 | GPS2 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,SKCM,THCA,THYM,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000132680 | KHDC4 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000135722 | FBXL8 | ACC,BLCA,CHOL,COAD,KIRC,KIRP,PAAD,SKCM,THCA,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000138834 | MAPK8IP3 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,ESCA,KICH,KIRC,KIRP,OV,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000142102 | PGGHG | ACC,CHOL,GBM,KIRC,KIRP,LGG,PAAD,SKCM,THCA | KIRC,KIRP | | | ENSG00000228393 | ENSG00000142330 | CAPN10 | ACC,BLCA,BRCA,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,THCA,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000151849 | CENPJ | ACC,CESC,CHOL,COAD,GBM,KIRC,KIRP,READ,SKCM,STAD,THYM,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000156876 | SASS6 | ACC,CESC,CHOL,COAD,GBM,KIRC,LGG,READ,STAD,THYM,UCEC | STAD | | | ENSG00000228393 | ENSG00000158062 | UBXN11 | ACC,CESC,CHOL,DLBC,ESCA,KIRC,KIRP,OV,PAAD,TGCT,THCA | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000158717 | RNF166 | ACC,CHOL,KIRC,KIRP,LGG | KIRC | | | ENSG00000228393 | ENSG00000161010 | MRNIP | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000164104 | HMGB2 | ACC,CHOL,GBM,READ,SKCM,THYM | CHOL | | | ENSG00000228393 | ENSG00000165138 | ANKS6 | ACC,CHOL,DLBC,GBM,PAAD,UCS | CHOL | | | ENSG00000228393 | ENSG00000165458 | INPPL1 | ACC,BLCA,CHOL,DLBC,KICH,KIRC,OV,PAAD,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000165724 | ZMYND19 | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,THCA | KICH | | | ENSG00000228393 | ENSG00000166012 | TAF1D | ACC,BLCA,CHOL,COAD,KIRC,KIRP,LGG,READ,STAD,THYM,UCEC | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000166508 | MCM7 | ACC,CHOL,GBM,KIRP,LGG,OV | CHOL,KIRP | | | ENSG00000228393 | ENSG00000167523 | SPATA33 | ACC,CHOL,ESCA,KIRC,KIRP,PAAD,READ,TGCT,THCA | CHOL | | | ENSG00000228393 | ENSG00000167604 | NFKBID | ACC,BRCA,CHOL,GBM,KIRC,KIRP,PAAD | KIRC,KIRP | | | ENSG00000228393 | ENSG00000167615 | LENG8 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCS | CHOL,KIRC | | | ENSG00000228393 | ENSG00000168014 | C2CD3 | ACC,BLCA,CHOL,COAD,GBM,TGCT,THYM | CHOL | | | ENSG00000228393 | ENSG00000168096 | ANKS3 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA | CHOL,KIRP | | | ENSG00000228393 | ENSG00000169592 | INO80E | ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,PAAD,READ,SKCM,THCA,THYM | KIRC | | | ENSG00000228393 | ENSG00000172890 | NADSYN1 | ACC,BLCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,THCA,UCS | KICH,KIRC | | | ENSG00000228393 | ENSG00000174165 | ZDHHC24 | ACC,CHOL,KICH,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000175265 | GOLGA8A | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,THCA,UCEC,UCS | KIRC,KIRP,STAD | | | ENSG00000228393 | ENSG00000175309 | PHYKPL | ACC,BLCA,BRCA,CESC,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000175455 | CCDC14 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC,KIRP,STAD | | | ENSG00000228393 | ENSG00000177595 | PIDD1 | ACC,BRCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,THCA | KIRC,KIRP | | | ENSG00000228393 | ENSG00000177990 | DPY19L2 | ACC,KICH,KIRC,KIRP,THCA,UCEC,UCS | KICH | | | ENSG00000228393 | ENSG00000184445 | KNTC1 | ACC,BLCA,CESC,CHOL,COAD,GBM,KIRC,KIRP,LGG,THYM,UCEC | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000184465 | WDR27 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000185189 | NRBP2 | ACC,CESC,COAD,GBM,KIRC,KIRP,LGG,PAAD,READ,THCA,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000185347 | TEDC1 | ACC,CHOL,GBM,KIRP,THCA | KIRP | | | ENSG00000228393 | ENSG00000185917 | SETD4 | ACC,BLCA,BRCA,CHOL,COAD,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000186166 | CENATAC | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000187741 | FANCA | ACC,CHOL,GBM,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000188493 | C19orf54 | ACC,CESC,CHOL,GBM,KICH,KIRP,READ | KICH | | | ENSG00000228393 | ENSG00000197774 | EME2 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,TGCT,THCA,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000197948 | FCHSD1 | ACC,BLCA,BRCA,CHOL,COAD,DLBC,GBM,KIRC,KIRP,PAAD,READ,THCA,THYM,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000204149 | AGAP6 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000204305 | AGER | ACC,BLCA,BRCA,CESC,CHOL,COAD,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,STAD,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000214021 | TTLL3 | ACC,BLCA,BRCA,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000215252 | GOLGA8B | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000215440 | NPEPL1 | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,READ,SKCM,TGCT,THCA,UCS | CHOL,KIRC | | | ENSG00000228393 | ENSG00000221829 | FANCG | ACC,CHOL,GBM,KIRP,LGG,THYM | CHOL | | | ENSG00000228393 | ENSG00000221838 | AP4M1 | ACC,CHOL,ESCA,GBM,KIRP,LGG,PAAD,SKCM,THCA | CHOL | | | ENSG00000228393 | ENSG00000221978 | CCNL2 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,STAD,THCA,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000267796 | LIN37 | ACC,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA,THYM | KIRC | | | ENSG00000228393 | ENSG00000273899 | NOL12 | ACC,BLCA,BRCA,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,PAAD,READ,THCA | CHOL,KIRC | | | ENSG00000228393 | ENSG00000003147 | ICA1 | BLCA,CHOL,KIRP,PAAD,READ | CHOL | | | ENSG00000228393 | ENSG00000006025 | OSBPL7 | BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,SKCM,TGCT,THCA,THYM,UCS | CHOL,KIRP | | | ENSG00000228393 | ENSG00000047578 | KATNIP | BLCA,CHOL,GBM,KIRP,PAAD,TGCT,UCS | CHOL | | | ENSG00000228393 | ENSG00000061938 | TNK2 | BLCA,CHOL,KIRC,OV,THCA | KIRC | | | ENSG00000228393 | ENSG00000065357 | DGKA | BLCA,CHOL,DLBC,KIRC,THYM | CHOL,KIRC | | | ENSG00000228393 | ENSG00000069493 | CLEC2D | BLCA,BRCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,OV,THYM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000072609 | CHFR | BLCA,BRCA,CHOL,GBM,KIRC,KIRP,LGG,PAAD,THCA,THYM | KIRC,KIRP | | | ENSG00000228393 | ENSG00000073605 | GSDMB | BLCA,CHOL,GBM,KIRC,KIRP,LGG,PAAD,THCA,THYM,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000075399 | VPS9D1 | BLCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000077454 | LRCH4 | BLCA,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,THYM,UCS | KICH | | | ENSG00000228393 | ENSG00000095066 | HOOK2 | BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,OV,PAAD,TGCT,THCA | CHOL | | | ENSG00000228393 | ENSG00000100068 | LRP5L | BLCA,BRCA,CHOL,DLBC,ESCA,KICH,KIRP,PAAD,STAD,THCA,THYM | KICH | | | ENSG00000228393 | ENSG00000100099 | HPS4 | BLCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,PAAD,THYM | KICH | | | ENSG00000228393 | ENSG00000102287 | GABRE | BLCA,CHOL,COAD,KIRC,READ,THCA,UCS | CHOL,KIRC | | | ENSG00000228393 | ENSG00000103227 | LMF1 | BLCA,CHOL,KICH,KIRP,PAAD,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000110844 | PRPF40B | BLCA,CHOL,KIRP,LGG,OV,UCS | CHOL | | | ENSG00000228393 | ENSG00000115687 | PASK | BLCA,BRCA,CESC,CHOL,COAD,ESCA,KIRP,OV,PAAD,STAD | CHOL | | | ENSG00000228393 | ENSG00000125633 | CCDC93 | BLCA,CHOL,COAD,GBM,KIRC,LGG,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000127415 | IDUA | BLCA,BRCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,SKCM,TGCT,THCA | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000130590 | SAMD10 | BLCA,CHOL,GBM,KICH,KIRC,KIRP,LGG,TGCT,THCA,UCS | CHOL,KICH | | | ENSG00000228393 | ENSG00000130702 | LAMA5 | BLCA,CHOL,KIRC,LGG,OV,TGCT,UCS | CHOL | | | ENSG00000228393 | ENSG00000138617 | PARP16 | BLCA,CHOL,GBM,KICH,LGG | KICH | | | ENSG00000228393 | ENSG00000139625 | MAP3K12 | BLCA,GBM,KIRC,KIRP,LGG,OV,TGCT,THYM,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000139631 | CSAD | BLCA,BRCA,CESC,COAD,DLBC,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,SKCM,STAD,TGCT,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000139636 | LMBR1L | BLCA,BRCA,CHOL,GBM,KIRC,KIRP,LGG,OV,PAAD,THCA,THYM | KIRC | | | ENSG00000228393 | ENSG00000141013 | GAS8 | BLCA,CHOL,GBM,KIRP,OV,PAAD,READ,SKCM,THCA | CHOL | | | ENSG00000228393 | ENSG00000142675 | CNKSR1 | BLCA,CHOL,OV,PAAD,READ,THCA | CHOL | | | ENSG00000228393 | ENSG00000146083 | RNF44 | BLCA,CHOL,GBM,KICH,KIRC,THYM,UCS | CHOL,KICH | | | ENSG00000228393 | ENSG00000149346 | SLX4IP | BLCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,PAAD,STAD,THCA,THYM,UCEC,UCS | STAD | | | ENSG00000228393 | ENSG00000152457 | DCLRE1C | BLCA,BRCA,CHOL,COAD,LAML,READ | CHOL | | | ENSG00000228393 | ENSG00000157259 | GATAD1 | BLCA,BRCA,CESC,CHOL,COAD,DLBC,KICH,KIRC,KIRP,LAML,LGG,OV,PAAD,READ,SKCM,TGCT,THCA,UCEC,UCS | KICH | | | ENSG00000228393 | ENSG00000158106 | RHPN1 | BLCA,CHOL,GBM,KIRC,KIRP,PAAD,SKCM,TGCT,THCA,THYM,UCS | CHOL,KIRP | | | ENSG00000228393 | ENSG00000159314 | ARHGAP27 | BLCA,CHOL,KIRC,KIRP,TGCT,THYM | CHOL,KIRP | | | ENSG00000228393 | ENSG00000161328 | LRRC56 | BLCA,CHOL,KIRP,OV,PAAD,THCA | CHOL | | | ENSG00000228393 | ENSG00000161960 | EIF4A1 | BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,UCEC,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000162194 | LBHD1 | BLCA,CESC,CHOL,DLBC,KIRP,PAAD,SKCM,THYM,UCEC | KIRP | | | ENSG00000228393 | ENSG00000162650 | ATXN7L2 | BLCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,OV,THCA,THYM | KIRP | | | ENSG00000228393 | ENSG00000163013 | FBXO41 | BLCA,CHOL,DLBC,PAAD,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000163257 | DCAF16 | BLCA,CHOL,COAD,DLBC,GBM,KIRC | CHOL | | | ENSG00000228393 | ENSG00000164855 | TMEM184A | BLCA,CHOL,KICH,KIRC,PAAD | KICH | | | ENSG00000228393 | ENSG00000164938 | TP53INP1 | BLCA,COAD,KICH,KIRC,KIRP,THYM,UCEC | KICH,KIRP | | | ENSG00000228393 | ENSG00000166619 | BLCAP | BLCA,COAD,ESCA,KICH,READ | KICH | | | ENSG00000228393 | ENSG00000167702 | KIFC2 | BLCA,CHOL,KICH,KIRC,KIRP,PAAD,SKCM,TGCT,THCA,THYM,UCS | CHOL,KICH,KIRC,KIRP | | | ENSG00000228393 | ENSG00000168781 | PPIP5K1 | BLCA,CESC,CHOL,DLBC,KICH,KIRP,PAAD,UCS | KICH | | | ENSG00000228393 | ENSG00000173681 | BCLAF3 | BLCA,CESC,CHOL,COAD,ESCA,GBM,KIRC,KIRP,LAML,LGG,PAAD,READ,SKCM,STAD,TGCT,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000174943 | KCTD13 | BLCA,BRCA,CHOL,DLBC,ESCA,KICH,KIRC,KIRP,PAAD,TGCT,THCA | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000176208 | ATAD5 | BLCA,COAD,STAD,THYM,UCEC,UCS | STAD | | | ENSG00000228393 | ENSG00000177548 | RABEP2 | BLCA,CHOL,KICH,KIRC,LGG,PAAD,TGCT,THCA | CHOL,KICH | | | ENSG00000228393 | ENSG00000178188 | SH2B1 | BLCA,BRCA,CESC,CHOL,DLBC,ESCA,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,READ,SKCM,TGCT,THCA,THYM,UCS | KICH | | | ENSG00000228393 | ENSG00000178295 | GEN1 | BLCA,CESC,CHOL,COAD,DLBC,GBM,READ,SKCM,STAD,THYM,UCEC | STAD | | | ENSG00000228393 | ENSG00000179832 | MROH1 | BLCA,CHOL,KICH,KIRC,KIRP,PAAD | CHOL,KICH | | | ENSG00000228393 | ENSG00000183397 | C19orf71 | BLCA,CHOL,OV,PAAD,TGCT,THCA,UCS | CHOL | | | ENSG00000228393 | ENSG00000185101 | ANO9 | BLCA,CHOL,KIRC,KIRP,PAAD,TGCT | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000185158 | LRRC37B | BLCA,BRCA,CHOL,GBM,KIRC,KIRP,LGG,PAAD,SKCM,THCA,THYM,UCEC,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000186088 | GSAP | BLCA,BRCA,CHOL,COAD,DLBC,ESCA,KIRC,KIRP,PAAD,SKCM,STAD,THCA,UCEC | KIRC,KIRP | | | ENSG00000228393 | ENSG00000188827 | SLX4 | BLCA,CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,PAAD,THYM | KICH | | | ENSG00000228393 | ENSG00000189007 | ADAT2 | BLCA,COAD,DLBC,ESCA,PAAD,READ,SKCM,STAD,THYM,UCEC,UCS | STAD | | | ENSG00000228393 | ENSG00000196123 | KIAA0895L | BLCA,BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,OV,PAAD,SKCM,THCA,THYM,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000197119 | SLC25A29 | BLCA,BRCA,CESC,CHOL,GBM,KIRP,LGG,OV,PAAD,THCA,UCS | CHOL | | | ENSG00000228393 | ENSG00000204116 | CHIC1 | BLCA,CHOL,COAD,TGCT,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000204991 | SPIRE2 | BLCA,CESC,CHOL,GBM,KICH,KIRP,LGG,PAAD,READ,STAD,TGCT | KICH | | | ENSG00000228393 | ENSG00000205560 | CPT1B | BLCA,CESC,CHOL,DLBC,KICH | CHOL,KICH | | | ENSG00000228393 | ENSG00000213139 | CRYGS | BLCA,CESC,CHOL,DLBC,KIRP,PAAD | CHOL,KIRP | | | ENSG00000228393 | ENSG00000213462 | ERV3-1 | BLCA,BRCA,CHOL,COAD,DLBC,KIRC,TGCT,UCS | CHOL | | | ENSG00000228393 | ENSG00000217930 | PAM16 | BLCA,BRCA,CHOL,DLBC,ESCA,KICH,KIRC,KIRP,LGG,PAAD,SKCM,STAD,THCA | KIRC | | | ENSG00000228393 | ENSG00000221886 | ZBED8 | BLCA,CESC,CHOL,COAD,KIRC,KIRP,LGG,PAAD,SARC,SKCM,TGCT,THCA,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000240230 | COX19 | BLCA,CHOL,KICH,KIRC,KIRP,PAAD,READ,STAD,THCA | CHOL,KICH | | | ENSG00000228393 | ENSG00000250067 | YJEFN3 | BLCA,CHOL,DLBC,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,UCEC,UCS | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000258839 | MC1R | BLCA,CHOL,KIRP,LGG,PAAD,THCA | CHOL,KIRP | | | ENSG00000228393 | ENSG00000004777 | ARHGAP33 | BRCA,CESC,CHOL,DLBC,GBM,KIRC,KIRP,PAAD,READ,SKCM,THCA,THYM,UCS | CHOL,KIRC | | | ENSG00000228393 | ENSG00000144134 | RABL2A | BRCA,CESC,CHOL,ESCA,GBM,KIRC,KIRP,LGG,OV,PAAD,THCA,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000162572 | SCNN1D | BRCA,GBM,KIRC,KIRP,LGG,OV,PAAD,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000213066 | CEP43 | BRCA,CESC,COAD,ESCA,KIRC,KIRP,READ,THCA,THYM,UCEC,UCS | KIRC | | | ENSG00000228393 | ENSG00000213903 | LTB4R | BRCA,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,TGCT,THCA | KIRC,KIRP | | | ENSG00000228393 | ENSG00000222009 | BTBD19 | BRCA,DLBC,KIRC,KIRP,OV,TGCT,THCA,UCS | KIRC,KIRP | | | ENSG00000228393 | ENSG00000143258 | USP21 | CESC,CHOL,DLBC,GBM,KIRC,KIRP,LGG,PAAD,TGCT,THCA,THYM | CHOL | | | ENSG00000228393 | ENSG00000147437 | GNRH1 | CESC,CHOL,KIRC,KIRP,PAAD,THYM | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000160298 | C21orf58 | CESC,CHOL,DLBC,GBM,LGG,OV,PAAD,SKCM,TGCT,THYM | CHOL | | | ENSG00000228393 | ENSG00000171806 | METTL18 | CESC,CHOL,LGG,READ,SKCM,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000174669 | SLC29A2 | CESC,CHOL,KICH,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000186364 | NUDT17 | CESC,CHOL,DLBC,PAAD,TGCT | CHOL | | | ENSG00000228393 | ENSG00000196476 | C20orf96 | CESC,CHOL,ESCA,KIRP,LGG,OV,PAAD,SKCM,TGCT,THCA,UCS | CHOL | | | ENSG00000228393 | ENSG00000205517 | RGL3 | CESC,KICH,KIRC,KIRP,OV,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000066279 | ASPM | CHOL,COAD,GBM,READ,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000070770 | CSNK2A2 | CHOL,COAD,GBM,KICH,THYM | KICH | | | ENSG00000228393 | ENSG00000071889 | FAM3A | CHOL,KICH,LGG,PAAD,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000077463 | SIRT6 | CHOL,KICH,KIRP,LGG,PAAD,THCA | CHOL | | | ENSG00000228393 | ENSG00000079313 | REXO1 | CHOL,KICH,KIRC,KIRP,PAAD,THCA,THYM | KICH | | | ENSG00000228393 | ENSG00000080839 | RBL1 | CHOL,COAD,GBM,LAML,READ,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000082269 | FAM135A | CHOL,COAD,KIRC,TGCT,UCEC | CHOL | | | ENSG00000228393 | ENSG00000090615 | GOLGA3 | CHOL,KICH,KIRC,PAAD,THYM | KICH | | | ENSG00000228393 | ENSG00000100241 | SBF1 | CHOL,DLBC,KICH,KIRC,THYM | KICH | | | ENSG00000228393 | ENSG00000103249 | CLCN7 | CHOL,KICH,LGG,PAAD,UCS | KICH | | | ENSG00000228393 | ENSG00000103326 | CAPN15 | CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA | KICH,KIRC | | | ENSG00000228393 | ENSG00000103932 | RPAP1 | CHOL,DLBC,GBM,KICH,PAAD | KICH | | | ENSG00000228393 | ENSG00000104081 | BMF | CHOL,KICH,TGCT,THCA,THYM | CHOL | | | ENSG00000228393 | ENSG00000104899 | AMH | CHOL,DLBC,GBM,LGG,PAAD,TGCT | CHOL | | | ENSG00000228393 | ENSG00000104936 | DMPK | CHOL,GBM,KIRC,KIRP,LGG,SKCM,THCA | CHOL | | | ENSG00000228393 | ENSG00000105486 | LIG1 | CHOL,GBM,KIRP,LGG,PAAD,THCA,THYM | CHOL,KIRP | | | ENSG00000228393 | ENSG00000106477 | CEP41 | CHOL,COAD,KIRP,LAML,TGCT,THYM | CHOL | | | ENSG00000228393 | ENSG00000110011 | DNAJC4 | CHOL,DLBC,KICH,KIRP,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000110721 | CHKA | CHOL,GBM,KICH,KIRC,KIRP,LGG,TGCT,THCA,UCS | KICH | | | ENSG00000228393 | ENSG00000119772 | DNMT3A | CHOL,COAD,KIRC,KIRP,PAAD,THYM | CHOL | | | ENSG00000228393 | ENSG00000122643 | NT5C3A | CHOL,LGG,READ,TGCT,UCEC | CHOL | | | ENSG00000228393 | ENSG00000125434 | SLC25A35 | CHOL,DLBC,GBM,LGG,PAAD,THYM | CHOL | | | ENSG00000228393 | ENSG00000125885 | MCM8 | CHOL,COAD,GBM,THYM,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000125967 | NECAB3 | CHOL,KICH,PAAD,THCA,UCS | KICH | | | ENSG00000228393 | ENSG00000129534 | MIS18BP1 | CHOL,COAD,LAML,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000131368 | MRPS25 | CHOL,GBM,KICH,KIRC,KIRP,LGG,OV,PAAD | KICH | | | ENSG00000228393 | ENSG00000131470 | PSMC3IP | CHOL,GBM,KIRP,LGG,THYM | CHOL | | | ENSG00000228393 | ENSG00000132436 | FIGNL1 | CHOL,COAD,GBM,KIRP,STAD,THYM,UCEC | STAD | | | ENSG00000228393 | ENSG00000135269 | TES | CHOL,KIRP,LAML,SKCM,THYM | CHOL,KIRP | | | ENSG00000228393 | ENSG00000135596 | MICAL1 | CHOL,ESCA,GBM,KIRC,KIRP,LGG,PAAD,THYM | CHOL,KIRC,KIRP | | | ENSG00000228393 | ENSG00000135736 | CCDC102A | CHOL,DLBC,KIRP,TGCT,THCA | CHOL | | | ENSG00000228393 | ENSG00000138346 | DNA2 | CHOL,COAD,STAD,THYM,UCEC,UCS | CHOL,STAD | | | ENSG00000228393 | ENSG00000139266 | MARCHF9 | CHOL,GBM,KICH,KIRP,PAAD,TGCT,THCA | CHOL | | | ENSG00000228393 | ENSG00000139624 | CERS5 | CHOL,COAD,LGG,PAAD,TGCT | CHOL | | | ENSG00000228393 | ENSG00000140948 | ZCCHC14 | CHOL,COAD,GBM,KICH,KIRP,TGCT,UCS | KICH | | | ENSG00000228393 | ENSG00000141570 | CBX8 | CHOL,DLBC,GBM,LGG,PAAD,TGCT,THCA,THYM | CHOL | | | ENSG00000228393 | ENSG00000144802 | NFKBIZ | CHOL,ESCA,KIRC,KIRP,PAAD,SKCM,TGCT | KIRP | | | ENSG00000228393 | ENSG00000145014 | TMEM44 | CHOL,DLBC,KIRP,LGG,PAAD,READ,THCA | CHOL,KIRP | | | ENSG00000228393 | ENSG00000149679 | CABLES2 | CHOL,KICH,KIRP,TGCT,THYM | KICH | | | ENSG00000228393 | ENSG00000158163 | DZIP1L | CHOL,GBM,KIRC,KIRP,TGCT | CHOL | | | ENSG00000228393 | ENSG00000159147 | DONSON | CHOL,GBM,KIRC,KIRP,LGG,THYM | KIRP | | | ENSG00000228393 | ENSG00000159792 | PSKH1 | CHOL,DLBC,KICH,TGCT,UCS | KICH | | | ENSG00000228393 | ENSG00000160051 | IQCC | CHOL,GBM,KIRC,KIRP,LGG,OV,PAAD,THCA | CHOL | | | ENSG00000228393 | ENSG00000160796 | NBEAL2 | CHOL,GBM,KIRC,OV,PAAD,UCS | CHOL | | | ENSG00000228393 | ENSG00000162769 | FLVCR1 | CHOL,COAD,GBM,LGG,PAAD,THCA,UCEC | CHOL | | | ENSG00000228393 | ENSG00000164221 | CCDC112 | CHOL,GBM,READ,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000164620 | RELL2 | CHOL,DLBC,PAAD,SKCM,THYM | CHOL | | | ENSG00000228393 | ENSG00000164896 | FASTK | CHOL,KICH,KIRC,KIRP,LGG,PAAD,TGCT,THCA | KICH | | | ENSG00000228393 | ENSG00000164983 | TMEM65 | CHOL,COAD,DLBC,KIRC,TGCT,UCEC | CHOL | | | ENSG00000228393 | ENSG00000166532 | RIMKLB | CHOL,GBM,KIRC,KIRP,LGG,THCA,THYM,UCEC,UCS | CHOL | | | ENSG00000228393 | ENSG00000166839 | ANKDD1A | CHOL,GBM,LGG,OV,SKCM,TGCT,UCS | CHOL | | | ENSG00000228393 | ENSG00000166925 | TSC22D4 | CHOL,KICH,PAAD,TGCT,UCS | CHOL | | | ENSG00000228393 | ENSG00000167595 | PROSER3 | CHOL,GBM,KIRC,KIRP,PAAD,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000168488 | ATXN2L | CHOL,GBM,KICH,KIRC,LGG,OV,PAAD,THYM | KICH | | | ENSG00000228393 | ENSG00000169221 | TBC1D10B | CHOL,KICH,KIRP,LGG,PAAD,THCA | CHOL | | | ENSG00000228393 | ENSG00000172432 | GTPBP2 | CHOL,DLBC,KIRC,LGG,THYM | CHOL | | | ENSG00000228393 | ENSG00000177225 | GATD1 | CHOL,KICH,PAAD,TGCT,THCA,UCS | KICH | | | ENSG00000228393 | ENSG00000178093 | TSSK6 | CHOL,DLBC,KIRP,LGG,SKCM | CHOL | | | ENSG00000228393 | ENSG00000178950 | GAK | CHOL,GBM,KICH,KIRC,LGG | KICH | | | ENSG00000228393 | ENSG00000179029 | TMEM107 | CHOL,KIRP,TGCT,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000182087 | TMEM259 | CHOL,DLBC,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000183856 | IQGAP3 | CHOL,GBM,STAD,THYM,UCS | CHOL,STAD | | | ENSG00000228393 | ENSG00000197183 | NOL4L | CHOL,STAD,TGCT,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000203965 | EFCAB7 | CHOL,ESCA,KIRP,TGCT,THCA,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000205268 | PDE7A | CHOL,COAD,LGG,THYM,UCEC | CHOL | | | ENSG00000228393 | ENSG00000214290 | COLCA2 | CHOL,KICH,KIRC,KIRP,PAAD | CHOL,KICH | | | ENSG00000228393 | ENSG00000240038 | AMY2B | CHOL,GBM,KIRC,KIRP,LGG,OV,THCA,THYM | KIRC,KIRP | | | ENSG00000228393 | ENSG00000241878 | PISD | CHOL,KICH,KIRC,KIRP,PAAD | KICH | | | ENSG00000228393 | ENSG00000242802 | AP5Z1 | CHOL,GBM,KICH,KIRC,KIRP,LGG,PAAD,THCA | KICH | | | ENSG00000228393 | ENSG00000266074 | BAHCC1 | CHOL,GBM,PAAD,TGCT,THYM,UCS | CHOL | | | ENSG00000228393 | ENSG00000266338 | NBPF15 | CHOL,COAD,DLBC,ESCA,GBM,KIRC,KIRP,LGG,UCS | KIRC | | | ENSG00000228393 | ENSG00000275023 | MLLT6 | CHOL,GBM,KIRC,KIRP,PAAD,TGCT,THCA,UCS | CHOL | | | ENSG00000228393 | ENSG00000278259 | MYO19 | CHOL,GBM,KIRC,KIRP,LGG,PAAD | CHOL | | | ENSG00000228393 | ENSG00000093167 | LRRFIP2 | COAD,GBM,KIRC,KIRP,LGG,READ,TGCT,THYM | KIRP | | | ENSG00000228393 | ENSG00000010295 | IFFO1 | DLBC,GBM,KIRC,KIRP,LGG,SKCM,THYM | KIRC,KIRP | | | ENSG00000228393 | ENSG00000167525 | PROCA1 | DLBC,GBM,KICH,KIRP,LGG,THYM,UCS | KICH,KIRP | | | ENSG00000228393 | ENSG00000008710 | PKD1 | GBM,KICH,KIRC,KIRP,LGG,OV,PAAD,TGCT | KICH | | | ENSG00000228393 | ENSG00000009694 | TENM1 | GBM,KIRC,KIRP,THCA,THYM | KIRC,KIRP | | | ENSG00000228393 | ENSG00000115257 | PCSK4 | GBM,KIRC,KIRP,LGG,PAAD,THCA,THYM | KIRP | | | ENSG00000228393 | ENSG00000124074 | ENKD1 | GBM,KIRP,LGG,PAAD,THCA | KIRP | | | ENSG00000228393 | ENSG00000130653 | PNPLA7 | GBM,KICH,KIRC,KIRP,PAAD,THCA | KIRC | | | ENSG00000228393 | ENSG00000140451 | PIF1 | GBM,SKCM,STAD,THYM,UCS | STAD | | | ENSG00000228393 | ENSG00000142303 | ADAMTS10 | GBM,KIRC,KIRP,LGG,TGCT,THCA,THYM | KIRC,KIRP | | | ENSG00000228393 | ENSG00000127922 | SEM1 | KICH,KIRP,LGG,READ,SKCM,THCA | KICH,KIRP | | | ENSG00000228393 | ENSG00000091592 | NLRP1 | KIRC,KIRP,PAAD,TGCT,THCA,UCS | KIRC | | | ENSG00000228393 | ENSG00000088766 | CRLS1 | KIRP,LGG,SKCM,THCA,UCEC | KIRP | | | ENSG00000228393 | ENSG00000241404 | EGFL8 | KIRP,LGG,SKCM,TGCT,THYM,UCS | KIRP | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000175066 | GK5 | 5 | BLCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000173933 | RBM4 | 5 | BLCA,COAD,KIRC,LUAD,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000166432 | ZMAT1 | 5 | BRCA,GBM,KIRC,LUAD,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000126870 | DYNC2I1 | 6 | BLCA,BRCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000116001 | TIA1 | 6 | BLCA,BRCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000003756 | RBM5 | 7 | BLCA,BRCA,COAD,GBM,KIRC,LUAD,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000197302 | ZNF720 | 5 | BLCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000167766 | ZNF83 | 5 | BLCA,BRCA,COAD,GBM,LUAD | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000234545 | FAM133B | 5 | BLCA,BRCA,COAD,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000149187 | CELF1 | 6 | BLCA,COAD,GBM,KIRC,LUAD,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000180376 | CCDC66 | 5 | BLCA,BRCA,COAD,GBM,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000120784 | ZFP30 | 5 | BLCA,COAD,KIRC,LUAD,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000065883 | CDK13 | 5 | BLCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000166801 | FAM111A | 5 | BLCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000163660 | CCNL1 | 6 | BLCA,BRCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000119231 | SENP5 | 5 | BLCA,COAD,GBM,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000132570 | PCBD2 | 5 | BLCA,BRCA,COAD,KIRC,UCEC | | ENSG00000228393 | ENSG00000168769 | TET2 | ENSG00000198625 | MDM4 | 5 | BLCA,BRCA,COAD,KIRC,UCEC |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000228393 | ENST00000450686 | PCYOX1 | ENSG00000116005 | ENST00000433351 | -0.2076 | 1 | - | CHOL,KIRP | | ENSG00000228393 | ENST00000450686 | PCYOX1 | ENSG00000116005 | ENST00000264441 | -0.1459 | 238 | - | CHOL,KIRP | | ENSG00000228393 | ENST00000445184 | SLC66A2 | ENSG00000122490 | ENST00000590381 | -0.1177 | 1 | - | CHOL |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000228393.3 | ENST00000450686.1 | 125 | 567 | 190 | | ENSG00000228393.3 | ENST00000445184.1 | 91 | 98 | 373 |
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