|
||||||
|
lncRNA: ENSG00000228350 |
Summary for LINC02585 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000228350 | Gene symbol | LINC02585 |
| Gene name | long intergenic non-protein coding RNA 2585 | |
| HGNC | 50302 | |
| Entrez ID | 102724368 | |
| Gene type | antisense | |
| Synonyms | 03p21.31|LINC02585|CELSR3-AS1 | |
| UniProtAcc |
Top |
Structure and expression level for LINC02585 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000228350 | 1.081083e+01 | 1.100334e+00 | 2.663267e-01 | 4.131520e+00 | 3.600000e-05 | 2.146770e-04 | UP | BLCA |
| ENSG00000228350 | 1.427344e+01 | 1.867226e+00 | 1.963209e-01 | 9.511092e+00 | 1.890000e-21 | 5.300000e-20 | UP | KIRP |
| ENSG00000228350 | 1.622517e+01 | 1.544541e+00 | 1.482973e-01 | 1.041517e+01 | 2.110000e-25 | 1.070000e-23 | UP | PRAD |
| ENSG00000228350 | 6.639934e+00 | 1.057848e+00 | 1.757238e-01 | 6.019944e+00 | 1.740000e-09 | 9.150000e-09 | UP | COAD |
| ENSG00000228350 | 7.069191e+00 | 1.699352e+00 | 3.901807e-01 | 4.355296e+00 | 1.330000e-05 | 1.270050e-04 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000228350 | 3.824065e-01 | 1.251301e-20 | PRAD | 2.925661e-19 |
Top |
lncRNA-Protein interaction for LINC02585 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
