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lncRNA: ENSG00000228223

Summary for HCG11

Gene summary

Gene information	Ensembl ID	ENSG00000228223
	Gene symbol	HCG11
	Gene name	HLA complex group 11
	HGNC	17707
	Entrez ID	493812
	Gene type	lincRNA
	Synonyms	06p22.2\|HCG11
	UniProtAcc

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Structure and expression level for HCG11

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID	Base mean	log2FC(AD/control)	lfcSE	Stat	P-value	Adjc.p-value	DEG direction	Cancer type
ENSG00000228223	1.863860e+02	-1.706711e+00	2.111453e-01	-8.083113e+00	6.310000e-16	7.230000e-15	DOWN	UCEC
ENSG00000228223	3.404318e+02	-1.173571e+00	1.257928e-01	-9.329398e+00	1.060000e-20	2.980000e-19	DOWN	PRAD
ENSG00000228223	6.874852e+02	-1.287724e+00	9.021243e-02	-1.427435e+01	3.160000e-46	5.910000e-45	DOWN	BRCA

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID	Correlation	P-value	Cancer Type	Adjc.p-value
ENSG00000228223	-4.286997e-01	2.772074e-05	KICH	5.396839e-05
ENSG00000228223	-3.854117e-01	5.907530e-21	PRAD	1.487486e-19
ENSG00000228223	-3.337111e-01	3.444160e-16	THCA	1.054660e-14
ENSG00000228223	-3.492515e-01	2.788655e-18	UCEC	7.606359e-17

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lncRNA-Protein interaction for HCG11

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000228223	ENST00000411553	HCG11	ENSG00000263001	GTF2I	76.63	90.9904	P78347	TF,Epi	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000134852	CLOCK	68.2	90.2265	O15516	TF,Epi	ChIP-seq
ENSG00000228223	ENST00000411553	HCG11	ENSG00000198919	DZIP3	85.4	94.4678	Q86Y13	RBP,Epi	NA

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000228223	ENST00000411553	HCG11	ENSG00000115816	CEBPZ	101.31	93.9625	Q03701	TF	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000168610	STAT3	83.74	90.5493	P40763	TF	ChIP-seq
ENSG00000228223	ENST00000411553	HCG11	ENSG00000106546	AHR	78.89	90.9511	P35869	TF	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000263001	GTF2I	76.63	90.9003	P78347	TF,Epi	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000170581	STAT2	75.93	91.694	P52630	TF	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000134852	CLOCK	68.2	90.7678	O15516	TF,Epi	ChIP-seq
ENSG00000228223	ENST00000411553	HCG11	ENSG00000257315	ZBED6	55.11	90.9445	P86452	TF	NA

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID	LncRNA ENST ID	LncRNA Name	Protein Ensembl ID	Protein Name	CatRAPID Score	Lncpro Score	UniPortID	Gene Subtype	Public source
ENSG00000228223	ENST00000411553	HCG11	ENSG00000137628	DDX60	95.8	95.2311	Q8IY21	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000125676	THOC2	93.96	95.6734	Q8NI27	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000075856	SART3	92.43	91.1585	Q15020	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000198919	DZIP3	85.4	94.664	Q86Y13	RBP,Epi	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000082898	XPO1	83.5	91.6634	O14980	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000163510	CWC22	75.93	92.833	Q9HCG8	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000021776	AQR	74.96	95.1647	O60306	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000129317	PUS7L	74.29	90.25	Q9H0K6	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000126070	AGO3	71.57	91.7625	Q9H9G7	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000129566	TEP1	71.55	94.9391	Q99973	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000162408	NOL9	70.17	91.0638	Q5SY16	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000134698	AGO4	69.64	91.2783	Q9HCK5	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000078269	SYNJ2	69.43	92.6459	O15056	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000136937	NCBP1	69.4	93.6254	Q09161	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000092847	AGO1	66.71	92.3464	Q9UL18	RBP	ChIP-seq
ENSG00000228223	ENST00000411553	HCG11	ENSG00000114127	XRN1	66.14	94.5697	Q8IZH2	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000123908	AGO2	64.17	91.8119	Q9UKV8	RBP	NA
ENSG00000228223	ENST00000411553	HCG11	ENSG00000135870	RC3H1	58.22	90.6112	Q5TC82	RBP	PAR-CLIP,Scan,pipeline,widely,used,MATCH,algorithm
ENSG00000228223	ENST00000411553	HCG11	ENSG00000113300	CNOT6	13.71	90.1522	Q9ULM6	RBP	NA

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lncRNA-DNA interaction for HCG11

lncRNA targets the enhancer region and positively regulates the gene expression.

Only predicted by TDF

CEBPZ,NCOA2,XRN1,KLF9,BCL6,ILF3,CPEB2,PBX2,RBM39,KLF12,ZBTB4,GLYR1,KLF7,LCORL,RBM7,JAZF1,MYSM1,NRF1,CSDE1,RBM23,RFX5,AKAP8,ZNF2,KAT7,ARID2,ZXDC,SUGP2,MAFG,RARB,DMTF1,ELF1,VEZF1,GLI3,RBM27,ZNF70,BAZ2A,ZNF24,RORA,RBM28,RUNX1,SNAI2,ATF6B,GABPA,NFKB1,IKZF5,ZBED4,MEF2C,STAT2,ZMAT3,TET3,ZBTB5,HEYL,ZFP14,ZXDA,RNPC3,ZFP69,TRPS1,NOP9,ATMIN,ZNF25,FOXO1,LARP7,TRNT1,CNOT4,SON,CWC22,DDX59,PBX3,ZBED5,ZZZ3,TTC14,DDX60,KLF6,STAT3,SMAD9,CREB1,MEX3C,RC3H1,ZNF44,EEA1,ZNF91,ZFP91,RBMX,AGO2,RBM4B,RBMS3,RBM26,ZFP1,PURB,ZBTB3,ADNP,NCBP1,PPIL4,TERF2,MBD1,IKZF4,PUS7L,ASH1L,MEIS1,CLOCK,ASCC1,NFIA,MEIS2,FUBP1,ZFP30,SP4,RBM43,KLF11,PRDM4,TCF20,LIN54,AGFG1,UBR5,THAP9,THOC2,DDX6,TSN,ZBTB6,THAP6,ERG,DDX17,ZBTB2,SRRM2,RFX7,FOXN3,AQR,ZNF22,SP2,LCOR,ZHX3,FMR1,MECP2,FOXJ3,KLF3,PURA,PHAX,ZNF41,TTF1,RBM41,THAP1,SART3,NOL9,DZIP3,SRBD1,IRF2,KLF10,SMAD3,ZNF28,CPSF2,ZNF45,CELF1,SCMH1,KRR1,TMF1,ELK4,RBM45,NFXL1,BACH1,PRDM2,AHR,RBM18,SALL2,MYNN,TFCP2,SKIL,QKI,ZFR,ZFX,ZNF8,NAF1,NR2C2,SYNJ1,STAT6,PUM1,GPBP1,BNC2,PLAG1,ARNT,KDM2B,ZNF14,G3BP2,RBM48,JDP2,LSM11,ZFHX3,DZIP1,PUM2,XPO1,TEAD3,ELF2,SMAD4,RBMS1,NFYB,ZNF43,PTBP3,ZFP28,MTF1,SP3,ZNF17,FOXC1,SRCAP,ZNF84,DDX42,BAZ2B,RXRB,ZHX2,AHDC1,KMT2A,ZEB2,AKAP1,MEOX2,SF3A1,MAF,ZFP3,MEF2D,TEP1,ADAT1,ZBED6,XPO5,ETV3,TET2,RBM33,NOL8,ATF2,ZNF10

Exist in public source

lncRNA targets the promoter region and positively regulates the gene expression.

Only predicted by TDF

GMEB1,PBX3,MECP2,RFX7,FOXC1,SMAD1,SF3A1,RBMX,REST,PUM2,PPIL4,PBX2,SKIL,ZNF70,RORA,ZXDC,ZHX3,DDX17,ZFP14,KLF8,AGO2,ATF1,MBNL1,ZFR,CPSF6,ZNF14,ADAT1,STAT2,FUBP1,LCOR,STAT3,MYNN,BACH1,NCOA2,TET2,AGO4,KMT2A,ASCC1,ARID2,LCORL,DDX59,SP4,AGO1,IRF2,FOXO3,BCL6,FOXN2,MEIS2,ZBTB4,ASH1L,ZNF45,HLF,KLF6,DDX46,KDM2A,SYNJ2,NFX1,ZFP30,ZEB2,TEP1,AKAP1,THAP1,TEAD3,BNC2,ELF1,MLXIP,UBR5,GTF2I,ZFP28,KLF12,RBMS2,TFCP2,TERF1,TCF20,G3BP2,FOXK1,RC3H1,ZBTB2,RUNX1,ZFP3,RBMS3,ZMAT3,NFIA,FOXJ2,ZBTB6,DDX1

Exist in public source

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for HCG11

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

Only predicted by lncTar

MCTS1,PIN1,SLIRP,KLF16,RALY,DDX56,THAP4,SNRPA,RBM42,E4F1,DDX41,THOC6,MBD3,LSM7

Exist in public source

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

lncRNA and exonskipping events positive correlated

LncRNA Ensembl ID	LncRNA ENST ID	Exon ID	Skipped Exon	dG	ndG	Gene name with skipped exon	TransID with skipped exon	ORF mutation
ENSG00000228223	ENST00000411553	exon_skip_96112	chr12:109945259-109945349	-13.21	-0.1672	GIT2	ENST00000355312	In-frame
ENSG00000228223	ENST00000411553	exon_skip_97739	chr12:121244572-121244615	-8.07	-0.3668	CAMKK2	ENST00000324774,ENST00000402834,ENST00000404169	Frame-shift
ENSG00000228223	ENST00000411553	exon_skip_470719	chr7:117134123-117134192	-8.91	-0.2546	ST7	ENST00000265437	In-frame

-lncRNA and exonskipping events are negatively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

LOF

lncRNA targets by miRNA.

LncRNA Ensembl ID	miRNA ID	LncRNA ENST ID	Binding site in lncRNA	Score	Energy	Align Len	Public source
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26526024-26526116	198.00	-72.25	91	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26526282-26526358	196.00	-77.64	75	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26525340-26525420	174.00	-69.45	71	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26525465-26525549	173.00	-71.15	67	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26524007-26524089	171.00	-64.49	78	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26526408-26526491	170.00	-76.15	61	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26525138-26525220	166.00	-71.42	80	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26525758-26525835	164.00	-67.86	74	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26524684-26524768	162.00	-65.92	80	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26523583-26523659	161.00	-69.75	74	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26525940-26526020	154.00	-57.61	80	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26523451-26523527	144.00	-66.32	79	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26523891-26523967	140.00	-59.90	79	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26524130-26524209	140.00	-61.34	77	NA
ENSG00000228223	hsa-mir-130b	ENST00000411553	chr6:26524519-26524597	140.00	-71.87	78	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525320-26525420	211.00	-106.94	102	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26526249-26526362	196.00	-103.02	110	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26526448-26526572	192.00	-112.22	120	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525709-26525827	189.00	-89.76	113	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524318-26524434	182.00	-84.61	104	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524657-26524775	177.00	-88.45	109	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26523730-26523840	176.00	-80.03	97	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524467-26524577	176.00	-92.68	104	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525451-26525557	175.00	-87.44	104	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524772-26524879	173.00	-84.83	105	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26523977-26524101	171.00	-89.46	118	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524881-26524989	170.00	-93.70	103	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525868-26525983	170.00	-77.86	113	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26526020-26526130	170.00	-95.90	112	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26523557-26523667	169.00	-88.17	91	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26524208-26524319	162.00	-88.99	114	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525195-26525319	158.00	-78.06	121	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26523874-26523981	157.00	-82.67	110	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26525002-26525107	154.00	-82.59	106	NA
ENSG00000228223	hsa-mir-182	ENST00000411553	chr6:26526128-26526249	146.00	-96.39	118	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26523731-26523846	225.00	-80.85	115	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525970-26526082	222.00	-91.57	114	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524949-26525085	206.00	-94.86	134	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525691-26525801	203.00	-89.01	113	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524358-26524464	198.00	-80.04	105	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524592-26524698	196.00	-74.07	106	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26526130-26526243	191.00	-88.57	107	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26523990-26524095	190.00	-79.50	78	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525363-26525477	190.00	-96.45	114	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26523609-26523727	186.00	-82.49	117	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525240-26525343	186.00	-75.76	102	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524812-26524936	184.00	-92.76	121	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524247-26524361	183.00	-70.40	107	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26523503-26523607	178.00	-75.11	82	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524669-26524784	175.00	-93.11	95	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26526304-26526419	169.00	-94.79	112	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525491-26525605	168.00	-102.33	112	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26526434-26526539	164.00	-103.37	111	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525844-26525953	159.00	-78.28	108	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26523879-26523995	149.00	-82.04	113	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26525134-26525246	147.00	-83.72	96	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524146-26524251	146.00	-81.97	108	NA
ENSG00000228223	hsa-mir-183	ENST00000411553	chr6:26524468-26524599	140.00	-91.02	119	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26523910-26524001	186.00	-58.47	78	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26523715-26523803	178.00	-52.63	79	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525056-26525145	177.00	-50.29	68	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525307-26525395	176.00	-74.70	87	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525867-26525953	171.00	-52.39	85	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524928-26525015	168.00	-54.36	72	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526169-26526253	165.00	-61.17	71	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26523454-26523538	163.00	-56.75	77	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526467-26526555	162.00	-75.62	59	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526246-26526337	159.00	-62.48	60	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524557-26524639	158.00	-69.11	84	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526380-26526470	154.00	-64.74	55	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524029-26524105	153.00	-56.83	78	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524820-26524913	153.00	-65.38	85	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525438-26525528	150.00	-55.18	55	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524695-26524780	148.00	-54.20	77	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524135-26524222	147.00	-54.89	90	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524463-26524556	145.00	-56.83	82	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525383-26525471	143.00	-64.24	49	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26525508-26525599	143.00	-70.59	53	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26523546-26523639	142.00	-59.50	74	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526106-26526188	142.00	-61.48	81	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26524224-26524328	141.00	-59.09	104	NA
ENSG00000228223	hsa-mir-3613	ENST00000411553	chr6:26526310-26526398	140.00	-69.23	61	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26523779-26523893	221.00	-64.16	114	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524885-26524973	212.00	-76.38	88	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524389-26524486	211.00	-68.70	99	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524258-26524362	205.00	-55.29	105	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26523978-26524090	204.00	-70.17	108	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26523528-26523634	201.00	-63.02	102	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524761-26524861	198.00	-58.35	99	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524076-26524175	185.00	-65.33	91	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26523656-26523750	181.00	-62.26	91	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525703-26525802	181.00	-75.04	93	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525265-26525376	178.00	-77.68	110	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26526130-26526231	176.00	-73.10	101	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525032-26525132	175.00	-62.27	96	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26524582-26524673	174.00	-59.19	96	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525929-26526026	174.00	-59.44	94	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26526330-26526423	174.00	-67.44	91	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525821-26525921	159.00	-71.20	96	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525158-26525254	149.00	-63.22	97	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26525420-26525509	147.00	-59.85	83	NA
ENSG00000228223	hsa-mir-590	ENST00000411553	chr6:26526446-26526548	142.00	-89.10	96	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26523927-26524006	179.00	-59.64	78	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26525377-26525452	178.00	-64.17	78	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26526066-26526147	174.00	-67.72	76	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26526452-26526541	174.00	-79.43	89	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26523619-26523703	167.00	-57.15	83	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524492-26524564	166.00	-56.78	72	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26526229-26526305	157.00	-52.45	77	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26525138-26525226	155.00	-65.80	77	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524192-26524272	153.00	-56.64	82	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524720-26524809	150.00	-54.11	84	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524939-26525014	150.00	-57.61	76	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26525783-26525868	149.00	-65.93	81	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26526303-26526383	149.00	-67.10	74	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26523718-26523802	147.00	-55.40	80	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524314-26524391	147.00	-52.15	74	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26524834-26524909	147.00	-58.79	78	NA
ENSG00000228223	hsa-mir-96	ENST00000411553	chr6:26525481-26525558	142.00	-63.76	73	NA

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Variants for HCG11

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID

LncRNA Name

SNP info

Number of Positive corelated Cancer

Positive corelated Cancer

Number of Negative corelated Cancer

Negative corelated Cancer

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lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID	TF ID	TF Name	PCgene ID	PCgene Name	Number of Cancer	Canaer Types
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000169057	MECP2	9	COAD,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,PRAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000169057	MECP2	8	COAD,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000181827	RFX7	5	DLBC,KIRC,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000181827	RFX7	7	COAD,DLBC,KIRC,LUAD,PAAD,PCPG,PRAD
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000181827	RFX7	11	CESC,COAD,DLBC,HNSC,KIRC,LUAD,OV,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000170365	SMAD1	5	KIRP,PAAD,PRAD,TGCT,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000170365	SMAD1	5	CESC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000099995	SF3A1	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000099995	SF3A1	6	CESC,DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000106546	AHR	ENSG00000084093	REST	5	DLBC,KICH,KIRP,PRAD,READ
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000084093	REST	6	DLBC,KIRC,LAML,PAAD,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000084093	REST	10	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000084093	REST	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000084093	REST	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000084093	REST	10	COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000055917	PUM2	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000055917	PUM2	11	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000055917	PUM2	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000055917	PUM2	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000055917	PUM2	13	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,OV,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000131013	PPIL4	5	DLBC,KIRC,PAAD,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000131013	PPIL4	6	DLBC,KICH,KIRC,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000131013	PPIL4	5	DLBC,KICH,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000131013	PPIL4	5	DLBC,KIRC,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000204304	PBX2	5	DLBC,KICH,KIRP,PRAD,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000069667	RORA	7	KICH,KIRC,KIRP,LUAD,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000069667	RORA	6	KIRC,KIRP,LUAD,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000174306	ZHX3	5	COAD,KICH,LUAD,PAAD,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000100201	DDX17	5	COAD,DLBC,KICH,LUAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000100201	DDX17	6	COAD,DLBC,HNSC,LUAD,OV,PAAD
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000142065	ZFP14	9	DLBC,KICH,KIRC,LUAD,PAAD,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000142065	ZFP14	7	DLBC,KIRC,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000123908	AGO2	5	COAD,DLBC,KIRP,LUAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000123908	AGO2	6	COAD,DLBC,KIRP,LUAD,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000123268	ATF1	5	DLBC,KIRP,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000123268	ATF1	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000123268	ATF1	6	DLBC,HNSC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000106546	AHR	ENSG00000152601	MBNL1	5	BRCA,DLBC,PRAD,READ,TGCT
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000152601	MBNL1	5	DLBC,PAAD,PRAD,TGCT,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000056097	ZFR	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000056097	ZFR	11	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000056097	ZFR	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000056097	ZFR	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000056097	ZFR	12	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000111605	CPSF6	6	COAD,DLBC,KICH,KIRC,LUAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000111605	CPSF6	8	CESC,COAD,DLBC,HNSC,KIRC,LUAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000105708	ZNF14	5	DLBC,KICH,KIRC,PCPG,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000065457	ADAT1	6	COAD,DLBC,KICH,KIRP,PAAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000065457	ADAT1	6	CESC,COAD,DLBC,KIRP,PAAD,PCPG
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000162613	FUBP1	7	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000162613	FUBP1	5	DLBC,KICH,KIRP,PAAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000162613	FUBP1	7	COAD,DLBC,KIRC,KIRP,LUAD,PAAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000196233	LCOR	8	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PCPG,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000196233	LCOR	8	COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000168610	STAT3	6	DLBC,KICH,KIRP,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000168610	STAT3	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000156273	BACH1	6	COAD,DLBC,KIRP,LUAD,PAAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000156273	BACH1	7	COAD,DLBC,KIRP,LUAD,PAAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000140396	NCOA2	5	DLBC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000140396	NCOA2	7	COAD,DLBC,LUAD,PAAD,PCPG,SARC,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000140396	NCOA2	8	CESC,COAD,DLBC,LUAD,PAAD,PCPG,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000168769	TET2	7	DLBC,KIRC,KIRP,LUAD,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000168769	TET2	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000168769	TET2	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000168769	TET2	8	DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000106546	AHR	ENSG00000134698	AGO4	7	BRCA,DLBC,KICH,KIRP,PRAD,READ,TGCT
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000134698	AGO4	7	COAD,DLBC,KICH,KIRC,LUAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000134698	AGO4	5	DLBC,KICH,PAAD,PRAD,TGCT
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000134698	AGO4	10	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,READ
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000118058	KMT2A	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000118058	KMT2A	10	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000118058	KMT2A	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000170581	STAT2	ENSG00000118058	KMT2A	5	KICH,KIRP,PAAD,PCPG,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000118058	KMT2A	11	CESC,COAD,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000189079	ARID2	9	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD,SARC
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000189079	ARID2	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000189079	ARID2	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000189079	ARID2	10	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000118197	DDX59	5	DLBC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000118197	DDX59	5	DLBC,HNSC,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000106546	AHR	ENSG00000105866	SP4	6	BRCA,DLBC,KICH,KIRP,PRAD,READ
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000105866	SP4	10	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000105866	SP4	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000105866	SP4	13	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,OV,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000092847	AGO1	7	DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000092847	AGO1	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000092847	AGO1	9	CESC,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000118689	FOXO3	6	COAD,KICH,KIRC,KIRP,LUAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000118689	FOXO3	5	KICH,KIRP,PAAD,TGCT,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000118689	FOXO3	8	COAD,KIRC,KIRP,LUAD,OV,PAAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000170802	FOXN2	5	DLBC,KIRC,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000170802	FOXN2	5	COAD,DLBC,KIRC,PAAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000170802	FOXN2	5	COAD,DLBC,KIRC,PAAD,PCPG
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000174282	ZBTB4	5	KICH,KIRP,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000174282	ZBTB4	5	KICH,KIRP,PAAD,PRAD,TGCT
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000116539	ASH1L	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000116539	ASH1L	11	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000116539	ASH1L	7	DLBC,KICH,KIRP,PAAD,PRAD,TGCT,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000116539	ASH1L	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000116539	ASH1L	13	CESC,COAD,DLBC,HNSC,KIRC,KIRP,LUAD,OV,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000124459	ZNF45	5	KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000124459	ZNF45	9	DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000124459	ZNF45	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000124459	ZNF45	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000124459	ZNF45	10	CESC,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000145833	DDX46	5	DLBC,KIRC,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000145833	DDX46	7	DLBC,KIRC,LUAD,PAAD,PCPG,PRAD,SARC
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000145833	DDX46	7	DLBC,KIRC,LUAD,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000173120	KDM2A	5	DLBC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000173120	KDM2A	6	DLBC,KIRP,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000173120	KDM2A	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000173120	KDM2A	7	DLBC,KIRP,PAAD,PCPG,PRAD,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000086102	NFX1	5	DLBC,KIRC,KIRP,LUAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000086102	NFX1	6	DLBC,KIRC,KIRP,LUAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000120784	ZFP30	6	COAD,KIRC,KIRP,PCPG,SARC,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000120784	ZFP30	6	CESC,COAD,KIRC,KIRP,PCPG,THCA
ENSG00000228223	ENSG00000106546	AHR	ENSG00000169554	ZEB2	5	BRCA,DLBC,KICH,PRAD,TGCT
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000169554	ZEB2	9	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000169554	ZEB2	6	DLBC,KICH,KIRP,PAAD,PRAD,TGCT
ENSG00000228223	ENSG00000106546	AHR	ENSG00000120690	ELF1	5	DLBC,KICH,KIRP,PRAD,READ
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000120690	ELF1	8	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000120690	ELF1	6	DLBC,KICH,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000120690	ELF1	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000120690	ELF1	9	COAD,DLBC,KIRC,KIRP,LUAD,PAAD,PRAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000104517	UBR5	5	DLBC,KIRC,PAAD,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000104517	UBR5	6	COAD,DLBC,KIRC,KIRP,PAAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000104517	UBR5	8	CESC,COAD,DLBC,KIRC,KIRP,PAAD,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000263001	GTF2I	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000263001	GTF2I	9	COAD,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000263001	GTF2I	5	DLBC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000118922	KLF12	7	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000118922	KLF12	6	DLBC,HNSC,KIRC,KIRP,LUAD,PCPG
ENSG00000228223	ENSG00000106546	AHR	ENSG00000076067	RBMS2	6	BRCA,KICH,KIRP,PRAD,READ,TGCT
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000076067	RBMS2	5	KICH,KIRC,KIRP,PRAD,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000135457	TFCP2	6	CESC,COAD,DLBC,HNSC,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000147601	TERF1	5	DLBC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000147601	TERF1	5	COAD,DLBC,PAAD,PCPG,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000147601	TERF1	6	COAD,DLBC,PAAD,PCPG,READ,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000100207	TCF20	8	DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SARC
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000100207	TCF20	9	DLBC,KIRC,KIRP,LUAD,OV,PAAD,PCPG,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000138757	G3BP2	5	DLBC,LAML,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000138757	G3BP2	5	DLBC,KIRP,LGG,PAAD,PCPG
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000138757	G3BP2	5	DLBC,KIRP,PAAD,PCPG,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000164916	FOXK1	7	DLBC,KIRC,KIRP,PCPG,PRAD,SARC,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000164916	FOXK1	5	DLBC,KIRC,KIRP,PCPG,PRAD
ENSG00000228223	ENSG00000106546	AHR	ENSG00000135870	RC3H1	5	DLBC,KICH,KIRP,PRAD,READ
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000135870	RC3H1	5	DLBC,KIRC,PAAD,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000135870	RC3H1	9	COAD,DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000135870	RC3H1	5	DLBC,KICH,KIRP,PAAD,PRAD
ENSG00000228223	ENSG00000257315	ZBED6	ENSG00000135870	RC3H1	5	KIRC,KIRP,PAAD,PRAD,SKCM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000135870	RC3H1	9	CESC,DLBC,HNSC,KIRC,KIRP,LUAD,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000180787	ZFP3	7	COAD,DLBC,KIRC,KIRP,LUAD,SARC,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000172667	ZMAT3	5	COAD,LUAD,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000162599	NFIA	6	COAD,KICH,KIRC,LUAD,PRAD,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000065970	FOXJ2	7	DLBC,KICH,KIRC,KIRP,PAAD,PRAD,THYM
ENSG00000228223	ENSG00000168610	STAT3	ENSG00000065970	FOXJ2	6	DLBC,KIRP,PAAD,PRAD,TGCT,THCA
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000065970	FOXJ2	7	CESC,DLBC,HNSC,KIRP,PAAD,PRAD,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000186130	ZBTB6	6	DLBC,KIRC,PAAD,PCPG,THCA,THYM
ENSG00000228223	ENSG00000134852	CLOCK	ENSG00000186130	ZBTB6	9	COAD,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,SARC,THYM
ENSG00000228223	ENSG00000263001	GTF2I	ENSG00000186130	ZBTB6	10	CESC,COAD,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,READ,THCA
ENSG00000228223	ENSG00000115816	CEBPZ	ENSG00000079785	DDX1	6	DLBC,LAML,PAAD,PCPG,THCA,THYM

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

Top

lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

Top

lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

Top

lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID	lncRNA-miRNA-mRNA	Cancer Types
ENSG00000228223	HCG11,hsa-mir-183,KANK2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,OGN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TNFSF12	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MRGPRF	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,COL14A1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ADGRA2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,OLFML1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,EPAS1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,LDB2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PTGIS	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,SNAI2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,DPT	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,CYYR1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,RASA3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ADAM33	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TAGLN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,AOC3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ECM2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,C1QTNF1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,GAS1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PER1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,C1S	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TGFBR3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,JAM2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,C1R	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,GEM	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,HLF	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,EMP3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TNS1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,COPZ2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MYLK	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,HIC1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,SSPN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TXNIP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TGFBR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MYH11	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,CPED1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PLSCR4	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,LIMS2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ABI3BP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,SLIT3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,INMT	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,GPRASP2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,CNRIP1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ANTXR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ZCCHC24	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,LTBP4	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MFAP4	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TGFB1I1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,SPART	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,EHD2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PODN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,VSIR	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,ACVRL1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,EMCN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,LMOD1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PI16	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MMRN2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,SERPINF1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,FERMT2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,CAVIN2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,FILIP1L	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,S1PR1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,TCEAL7	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,DCN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,CLMP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,DDR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MOB3C	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,STX12	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,GPRASP1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,MSRB3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,RECK	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,PRELP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-183,LAYN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-590,PLSCR4	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,AOC3	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,TNS1	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,FBXO32	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,WWTR1	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,CRIM1	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,TPM1	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,PARVA	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,MSRB3	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,TMEM43	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-590,VCL	UCEC,TGCT,PRAD,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-182,MYH11	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,NPR2	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CCDC80	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PLSCR4	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,TGFBR3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,C1S	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SRPX	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PID1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CFH	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CALD1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GYPC	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,RIN3	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GPRASP1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,ARHGAP31	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GNG11	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,COL6A3	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ECSCR	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CLIC2	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MMP19	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TGFB1I1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,MSRB3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CHRDL1	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,HIC1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TNS1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DENND2A	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,TSC22D3	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DSE	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MRGPRF	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,EPAS1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,RECK	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LRP1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,EMCN	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,PER1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,MYCT1	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,RSPO3	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ECM2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ZEB2	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CNRIP1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PLN	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FBXL7	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,VSTM4	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ADAMTS1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CCDC8	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ANTXR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,ZCCHC24	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CXCL12	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LRCH1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,DCN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LAMA4	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FZD4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,INMT	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TEK	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ERG	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TCEAL7	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PRELP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,QKI	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SH3BP5	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MFAP4	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GLT8D2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ADGRA2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CYYR1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,STON1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MYLK	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,EMP3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,SLC16A2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SPART	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GINM1	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,EHD2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,PMP22	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SLIT3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PECAM1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GLIPR1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MOB3C	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,PODN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DAAM2	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ACVRL1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FSTL1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MAF	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ADPRH	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ANGPTL2	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,THSD1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,RAB3IL1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LMOD1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,DIXDC1	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,OLFML1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,RCAN1	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ANGPTL1	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,COPZ2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MPDZ	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LDB2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LIMS2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MCAM	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PTGIS	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,SNAI2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,SH3D19	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,C1R	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DPT	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,COL6A2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PCDHGC3	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,PDGFRA	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ADAM33	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,BOC	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SHROOM4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CPED1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ROBO4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GIMAP8	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,MMRN2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TAGLN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,H6PD	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,AOC3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CRISPLD2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SERPINF1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ELK3	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,C1QTNF1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,COL14A1	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DNAJB5	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FERMT2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,CAVIN2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FILIP1L	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,S1PR1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,JAM2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,STX12	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ADGRL4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TIE1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,SSPN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,LAYN	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GIMAP6	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,PI16	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,CLMP	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TXNIP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,GAS1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,OGN	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,EMILIN1	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,DDR2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ABI3BP	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,FKBP7	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,ENG	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-182,TGFBR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-182,LPAR1	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-182,GEM	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-130b,FBXO32	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,TAGLN	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,SBDS	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,FEZ2	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,SSPN	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,MSRB3	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,ITM2B	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,RAB12	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,TOR1AIP1	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-130b,STOM	UCEC,PRAD,READ,PAAD,THYM
ENSG00000228223	HCG11,hsa-mir-96,MFAP4	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,IGFBP4	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PID1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,VCL	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MMP19	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CCN1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LTBP4	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,CRISPLD2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ECSCR	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FERMT2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FBLN1	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ARHGAP31	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ADAM33	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MYLK	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CSF1	KICH,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CALD1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ABCC9	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ERG	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SSPN	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TIE1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SH3D19	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PODN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SOX7	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,OLFML1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MPDZ	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PTGIS	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SNAI2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,GNG12	UCEC,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,RAB3IL1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,BOC	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DSE	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MBNL2	UCEC,KICH,TGCT,THCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,TGFB1I1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,PLXDC2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DIPK2B	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DIXDC1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ELK3	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,C1QTNF1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,DNAJB5	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PECAM1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GAB1	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MMRN2	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PRICKLE2	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LRRC32	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,COL14A1	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GPATCH11	KICH,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PER1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,MRGPRF	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ETS1	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CNN3	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,A2M	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ANTXR2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,CYBRD1	UCEC,KICH,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GEM	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CXCL12	UCEC,KICH,TGCT,BRCA,THCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,HIC1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MRAS	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,RASL12	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,EPAS1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PCDHGC3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SELP	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,QKI	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PROS1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TCEAL7	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ZEB2	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,STON1	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SLIT3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FGL2	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ACVRL1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SMIM10	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ANGPTL2	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,RECK	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,COPZ2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ADGRA2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,HNMT	UCEC,KICH,TGCT,BRCA,THCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,MSRB3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,C7	UCEC,KICH,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,S1PR3	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,HSPA12B	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,AOC3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DPT	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,RSPO3	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DUSP1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TNFSF12	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GIMAP6	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PRELP	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TXNIP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,ADPRH	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ROBO4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TGFBR3	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SRPX	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PLN	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GYPC	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,OGN	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CLIC2	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MYH11	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,CHRDL1	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TGFBR2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CNRIP1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SNX9	UCEC,KICH,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CCDC8	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MOB3C	KICH,TGCT,BRCA,THCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,STAT3	KICH,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,INMT	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LRCH1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,CD34	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CPED1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,EHD2	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,TAGLN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TSC22D3	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FZD4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SLC16A2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SPART	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,KLHL13	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,ECM2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LATS2	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ENG	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GAS1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TIPARP	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,ANGPTL1	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TEK	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MCAM	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MAF	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PDGFRA	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ARHGEF15	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,KLF9	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,H6PD	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SERPINF1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MAP3K3	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,BCL6	KICH,TGCT,BRCA,THCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CAVIN2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FILIP1L	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DCN	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CLMP	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,EMILIN1	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,DDR2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PLAC9	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,FKBP7	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LPAR1	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,NPR2	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CCDC80	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PLSCR4	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GNG11	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,IFNGR1	UCEC,KICH,BRCA,THCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PI16	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GIMAP8	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CFH	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SERPING1	UCEC,KICH,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CALHM2	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GPRASP1	UCEC,KICH,TGCT,BRCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,EMCN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ABI3BP	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,C1S	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,C1R	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,GINM1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SERINC1	UCEC,KICH,TGCT,THCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,STX12	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CD93	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LIFR	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MYCT1	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,PMP22	UCEC,KICH,TGCT,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CYYR1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,RHOJ	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LAMA4	UCEC,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LEPR	UCEC,KICH,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ADGRL4	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LMOD1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CAVIN1	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,SH3BP5	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,TUBB6	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LHFPL6	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,KDSR	UCEC,TGCT,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,MYCBP2	KICH,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,KLF10	KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,CLEC14A	UCEC,KICH,TGCT,BRCA,PAAD
ENSG00000228223	HCG11,hsa-mir-96,ZCCHC24	UCEC,KICH,TGCT,BRCA,THCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LAYN	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,C4orf3	KICH,TGCT,BRCA,THCA,PRAD
ENSG00000228223	HCG11,hsa-mir-96,JAM2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD
ENSG00000228223	HCG11,hsa-mir-96,LDB2	UCEC,KICH,TGCT,BRCA,PRAD,PAAD

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lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000228223.2	ENST00000411553.2	68	278	484

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential