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lncRNA: ENSG00000227640 |
Summary for SOX21-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000227640 | Gene symbol | SOX21-AS1 |
| Gene name | SOX21 antisense divergent transcript 1 | |
| HGNC | 39807 | |
| Entrez ID | 100507533 | |
| Gene type | lincRNA | |
| Synonyms | SOX21-AS1|13q32.1 | |
| UniProtAcc |
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Structure and expression level for SOX21-AS1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000227640 | 4.310564e+02 | 7.005559e+00 | 1.203734e+00 | 5.819858e+00 | 5.890000e-09 | 2.690000e-07 | UP | CESC |
| ENSG00000227640 | 5.247052e+02 | 4.113420e+00 | 2.381590e-01 | 1.727174e+01 | 7.680000e-67 | 3.280000e-65 | UP | LUSC |
| ENSG00000227640 | 3.582638e+02 | -2.313018e+00 | 4.752285e-01 | -4.867170e+00 | 1.130000e-06 | 7.410000e-06 | DOWN | STAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for SOX21-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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