 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | ARHGEF1,VAMP1,NDUFS3,MFSD8,MCRS1,ABHD17A,IFT22,CIRBP,RNF166,MZF1,C1orf56,SHARPIN,TTC31,RGS10,MAPK8IP3,SRP19,PPP2R3B,TRUB2,SLF2,TDP2,TIMM17B,NDUFB9,SLC25A12,METTL5,WDR5B,ST7L,DTYMK,MSANTD2,TRAPPC2L,FAM200A,CHKA,TERF2IP,UBE2N,RECQL4,COA4,TTC14,KNSTRN,NDUFB2,SNUPN,PPP1R2,TAF9,CBX3,COX19,VKORC1,MPLKIP,PSIP1,TMEM231,TIMMDC1,ZBTB6,WDR5,OFD1,HSPE1,MRPS11,RPS28,FCHSD1,TMEM243,CC2D1B,CDKN2AIPNL,CFAP298,INO80E,CSNK2B,APBA3,MEA1,RPL35,CENPA,MIIP,LPAR2,RPP38,C18orf21,C22orf39,COQ6,C12orf73,DONSON,MBD4,TSC22D4,CDK11A,SYMPK,BTF3L4,SUPT20H,DCUN1D2,EIF2B1,MRPL41,BUB3,FBXW9,GIGYF1,CCDC167,NDUFB1,RHEBL1,NOL3,SEC31B,CIR1,PDRG1,ARHGAP33,DMAC2L,C9orf40,ECD,HEXD,LYSMD1,FAM204A,PTRHD1,CCDC34,CDK5,CDCA3,ABHD8,ZNF30,MRPL52,TEDC2,FANCL,C1orf159,FAM98C,UBE2G2,IP6K2,THOC3,SWI5,POLR2C,MALSU1,MLLT6,RPL23,INO80C,ICE2,AGK,ENOPH1,BIVM,C20orf96,PHF7,HSCB,ARFGAP1,UCHL3,AP1G2,RPL13A,BANP,LSM3,CCDC59,LRRC20,AIMP1,PCLAF,CISD1,IFT74,STYXL1,RPA2,NPDC1,PIDD1,METAP1D,PSMD14,JTB,ANAPC13,AP5Z1,GGCT,BBS2,CEP83,RFC4,LRIG2,P4HTM,PARP2,PATZ1,PCED1A,MAPK15,IKBKB,BRF1,ANKRD49,PAXBP1,GATB,PTTG1,SLC35C2,REXO4,NXT1,NVL,ATG14,PSME1,TRPT1,MYNN,MRPS18B,SERP2,MED19,ROGDI,SNX5,TMEM199,PCSK4,DMAC1,NDUFA12,DDX11,SPC24,NDUFAF7,HMBS,ZNF862,TRIAP1,NPM3,IDUA,PRMT1,CNPY4,CENPL,GGT7,SCAND1,COX14,PPCDC,KHDC4,RALY,FHOD1,AMH,AMZ2,ATP5IF1,VPS72,DUT,PYM1,MYPOP,ATXN7L2,DALRD3,POC5,TTC23,DARS1,MSTO1,DTD2,UIMC1,SRI,TAF1D,MKS1,FOXRED1,IFT88,PSMG1,PCBD1,EML3,TAF12,EFCAB7,GFER,GABBR1,TIMM9,TFAP4,MIEN1,ALG5,UQCRH,TP53I13,CCDC32,NUP37,INTS7,TXNDC12,RBM26,SNRPD3,NDUFB5,CAMK2G,CCNH,TERF2,RPL36AL,CYBC1,CEBPZOS,MLH3,PTS,COX7B,GEMIN6,PFDN1,TXN,PHF1,ABHD11,HDAC10,HSF4,NOXA1,MRPL17,UCK1,C2orf49,RAD51C,NUP88,PSPC1,HSPBAP1,COX7A2L,POLR1C,MRPL39,APEX1,MZT2A,PSMG4,METTL6,PBX4,TIA1,SAAL1,IFI27L1,BRAT1,SLBP,ERCC3,PSMG3,UQCR10,SAYSD1,WDR46,DTX3,ZMYND19,MTG2,E2F1,RNF215,CKS1B,NAT9,ABHD14A,LUC7L,LSM2,PCNA,BRD8,ERCC8,LRSAM1,ATP5PF,MRPL43,TOMM7,CRTC2,AMY2B,CYTH2,C8orf76,B9D2,EIF3I,NOP53,RBM33,ADAL,NOL8,NDUFB10,WRAP73,MPHOSPH10,C15orf61,TATDN3,HDDC3,GPANK1,SERGEF,RCC1L,NDUFAB1,ZNF2,POLE3,IGBP1,TTC1,SAMD10,C1QL1,MUTYH,RPL27,PMF1,LARP7,ZC3HC1,NIPSNAP3B,CWC22,LRRC75B,C2orf42,SENP3,MRPS16,S100PBP,SUPT16H,TAF1C,STOML2,TEFM,SURF6,UBL5,RPS8,RPS11,THAP9,ACTR3B,SKAP1,LIPT2,THAP6,E2F5,GGPS1,CSTF1,NECAP2,SENP7,MTRF1,DGAT1,ARVCF,PRAF2,TSFM,GTF2E1,TEDC1,FAM216A,STK19,HTRA2,ANO9,WASHC1,GTF2E2,RWDD2B,KLC1,FUNDC1,GPS2,NOL12,NSA2,LYRM1,EIF3H,COMMD6,SPATA33,ACP6,DNM1,CBR4,LZTS2,EMC9,EIF3E,CARD19,BLMH,DUSP28,MARCHF5,BOLA1,ANP32A,VPS16,BCDIN3D,TOMM5,ZCCHC7,TTLL3,RHBDD3,MED10,ARMC1,TFB1M,PMPCA,SPSB2,LRP5L,OXA1L,SH3GLB2,MRPL38,SIRT7,KRCC1,UXT,SLIRP,CTF1,MRM2,TXNL4B,CENPK,FASTKD3,PET100,CMC2,DYNC2I2,BCS1L,DMTF1,HINT2,LMBR1L,HSDL1,PIGP,NDUFA11,CDCA5,ENY2,CENATAC,SMUG1,WDR54,SAFB2,SNAPC1,APTX,OSER1,LZTFL1,PNPT1,POLR2K,SURF2,ZBED5,INPP5B,IK,SLC2A11,SUGP1,SPG7,NAA80,NABP2,UQCR11,BRICD5,PPIP5K1,TIMM23,TMEM208,POLD1,CLK2,WDR70,LYRM4,POLG2,CTC1,AGBL5,ITGB3BP,GABPB1,NASP,RPAIN,ACYP1,MRPL14,TBCCD1,IFT172,CTU2,PFDN6,TOR3A,ZWINT,C3orf62,EIF2A,ALKBH2,C9orf72,ZBED8,AGER,UBE2E1,C1orf52,POGLUT1,MRPL32,NXF1,TSSK6,PAN2,PNMA1,C2orf76,PFDN5,LRTOMT,CHEK1,CCAR2,METTL4,SPCS1,STN1,KLHL17,HDDC2,SDHAF2,HDAC8,RPL23A,CCDC24,RINT1,ORC6,UQCRHL,EAPP,ALKBH3,KIF12,THOC7,SHOC2,COX7A2,NARS2,HERC4,ISCA2,RSL24D1,IQCC,CASTOR3,SKA2,TMEM254,PYROXD2,TRMO,PDCD10,MRPL55,EMG1,MED7,SH2B1,SNRNP25,DGKA,NFU1,IFTAP,SPATA5L1,C9orf78,TMEM18,EIF2B4,DDX55,GLMN,THOC1,WDR59,SURF1,LCMT1,ACBD6,PPP3CB,TRAPPC4,TMEM138,LTO1,TMEM251,CCDC106,ASCC1,MED27,NELFE,METTL23,EXD3,NFKBID,GSDMD,ELP5,CHMP2A,DYNLT2,ACIN1,DNAJC19,ZNF48,CCHCR1,PRMT7,INPP5E,PHF11,QARS1,CIAO2A,CHRAC1,VPS4A,HEMK1,SMIM12,HAUS1,FRS3,FBXL8,PSMG2,KRTCAP2,ANXA7,CCDC82,POP5,BTBD6,MYL5,UCKL1,TTC12,FKBP3,NAP1L4,PTCD1,HARS2,PDCD2L,HPS4,TRIOBP,CARD8,SRA1,ENKD1,LRRC14,BLOC1S1,C11orf1,STMN1,ZBTB8OS,CCDC107,MRPL34,BICRA,ARF5,CHTF18,JPT1,CCDC174,HES6,CDK5RAP1,MARCHF9,C14orf119,NPRL2,SUV39H2,MIS18A,FBXO46,RNPC3,PSTK,CCDC77,GINS3,SLC66A1,BCAT2,DHRS12,ORC3,STX10,CENPQ,ZBTB3,SAP18,RBM25,C1orf131,ENDOV,BLCAP,FAM162A,ELP6,ERMARD,RNF114,EPC1,ZNF22,HIRA,TMEM69,MRPS22,CHADL,ARGLU1,YJEFN3,NEPRO,SGSM2,CCDC90B,ORC5,KRI1,RNF25,BCL2L12,DYRK4,FAM149B1,CENPS,LBHD1,NUDT5,PPM1M,UBA3,IPO4,ZCCHC10,NDUFA5,CWF19L1,COA5,COQ9,SSBP1,SAR1A,DPH5,BRD9,SMIM19,PARP16,FKBP2,SRRT,CHCHD4,FN3KRP,DNAAF2,GEMIN8,BOLA3,TADA1,MRPS26,UBE2I,POT1,TMEM267,C16orf86,RRNAD1,ZSWIM7,RP11-523H20.5,KIAA0895L,NDUFAF6,ATAD3B,HAUS8,ZNF74,BANF1,PHYKPL,SF3B1,TMEM9,PRKRA,HAX1,ZFP69,NARF,HACL1,PTGES3,TIMM10,BUD31,ASB6,ZDHHC12,POLR2J,PTPMT1,ARL3,CENPT,IAH1,RMND1,MRTO4,IMMP2L,POGZ,NUDT2,RBM4B,SNRPB,MRPS31,CCDC102A,C21orf58,TMEM143,C12orf43,ATP5MJ,FUBP1,SLC38A6,CXXC1,HMGB2,DDX17,C8orf82,PSMA4,PARD6A,HAUS5,ELOC,MRPS33,TBC1D7,FBXL12,SDR39U1,CDAN1,HAUS4,TRAIP,RHEB,PCYOX1L,NDUFC1,MTFR1L,SPIN2B,CRYZL1,SUPT3H,ANKRD16,GOLGA8B,AHSA1,GSS,SMG9,TIMM29,GOLGA8A,PAM16,SETD4,SPATA24,CPSF3,PSMC5,ADPRS,CRBN,ZNF84,SEC11A,PDCD6,ZDHHC6,MDP1,PCMTD1,NAE1,USP20,LZTR1,KBTBD2,MRFAP1L1,PPA1,GSDMB,PEX2,HELQ,TCEA2,OXNAD1,PRPSAP2,TMEM234,MCM7,PSMB7,FAM24B,ATP5MG,TWNK,SIRT3,SUGP2,HSPA14,ING1,RPL41,LRRC42,PNKD,WDCP,ZFP14,NPEPL1,TUBGCP6,CCDC14,EIF2B5,GMPR2,RABGGTB,ACTR6,KNTC1,SVBP,GKAP1,TAZ,C19orf44,DAXX,PSMD13,PITHD1,CYB5D2,OGT,RCCD1,CCNB1IP1,RAB4B,TARBP2,DHX34,RING1,CHKB,CEP89,ANAPC10,BBIP1,TRIM11,ABHD14B,OSGEP,CLK1,MRRF,DHPS,WASHC3,BABAM1,TTF1,LPCAT4,ZADH2,CCDC28A,NDUFA2,BORCS6,ORMDL1,FDX2,DDX51,BRIX1,PSMB3,PASK,MLH1,FAM229B,UBE2C,ATG4B,CENPM,HIF1AN,KIF9,FAM229A,CCS,RMI1,ABCA7,TMCO6,XPO1,ACOT8,CDC123,TMEM126B,FRAT2,MBTD1,SEPSECS,BMT2,COMMD8,COA6,IFT122,ITGB1BP1,ANAPC11,SCNN1D,TOR2A,TMEM14A,CCDC12,PRXL2C,BUD13,ERCC5,HSD17B7,FBXO4,OARD1,THADA,CEP20,ILF3,CIZ1,PPP1R12C,PRR3,NICN1,PPOX,SH3D21,WDR53,PIF1,PPWD1,MRPL20,SH3YL1,TRIM65,COX16,ASTE1,TIMM44,ADPRM,RPL22L1,MRPS28,HPF1,CAPN10,MICA,TMEM175,C16orf74,TAMM41,MRPL24,SPACA9,MRM1,EEF1B2,C4orf48,CDK20,SMPD2,PSMC3,TRIM13,CWC15,MED6,NFYC,PPA2,CPSF4,NAA10,FBXO44,ATP5F1C,NHP2,TUSC2,PGP,MRPS15,CEP70,PRR7,ENOSF1,THOC6,COA1,MRPS23,FNBP4,MMS19,DENND6B,ZFYVE19,TOMM22,PTRH2,IL11RA,NEK8,NAP1L1,SERF2,RPS10,CLEC2D,VPS28,BCL7B,SUMO2,MRPL36,KIFC2,TSNARE1,NIT1,MRPS9,RABEP2,ALKBH4,PYURF,PLGRKT,NDUFAF5,GPBP1,AP4M1,MFF,DRAM2,FRG1,KHDC1,LRWD1,SYF2,ACP1,NTHL1,NSL1,STK32C,WDR27,EME2,CCDC71,NAIF1,NDUFAF2,S100A13,DCAF15,PNISR,SFPQ,ACAP3,LRRC27,DNAJC9,TMEM187,SPAG7,ZNF10,TAF11,MORN2,NUDT1,TRMU,PSMA2,SEM1,WASHC2C,STMP1,DNPH1,MYL12B,C1orf35,LSM10,KLHDC4,EIPR1,CCNL2,ANKRD10,VPS9D1,CHTOP,TATDN1,LSM5,TCEAL1,DDTL,SEC61B,KYAT1,COPS9,OSBPL7,KAT2A,PLA2G6,RNPS1,PDCD2,SLC27A3,KARS1,DPY30,FLAD1,MRPL50,FAM50A,ITPA,SF3B6,POLI,PRPF39,MRPL22,TRIM45,MIB2,WHRN,UTP3,CEP44,SCRN2,ANKS3,SMDT1,C10orf88,CRYGS,OGG1,PMS1,RPS6,ZNF83,PREB,NSUN6,MCRIP2,TRAPPC3,ABHD10,PSMB1,THOP1,GIN1,NTAQ1,CRAMP1,PROCA1,NUDCD2,CCAR1,CENPJ,C14orf93,DPH7,NSMCE4A,CKLF,FUNDC2,POLR3F,PNPLA7,HINFP,XPA,APBB3,YPEL5,STX2,ANAPC16,RUFY2,WBP1,RAD17,TRIT1,SSR2,AGAP6,NUDT16L1,RBM39,EDC3,INTS14,NME7,NDUFA13,TMEM44,IQCB1,SNRPD2,PRTFDC1,TRIM39,EIF3F,ERH,CSAD,PAAF1,HSD17B8,NDUFA4,RBM28,BCL7C,IKZF5,TMEM259,ARPC5L,CACTIN,FRA10AC1,EME1,PDZD11,OGA,PYCR2,NUP42,IFT27,ZNHIT1,ARHGAP4,COPS5,SWSAP1,NT5C3B,PA2G4,TM2D3,CRLS1,MTG1,PAK1IP1,FAM76B,GTPBP3,VPS29,C20orf27,BIN1,MRNIP,SS18L1,ING4,RRP8,REC8,GLRX3,PGGHG,IFT46,FBXL6,WDR61,USP21,TRIM52,COA8,PCBP4,MOSPD3,TTC13,ATOX1,MICAL1,NDUFA8,COASY,TMEM230,RPS24,NDUFB6,TPRKB,NEDD8,PSMC3IP,GMEB2,YPEL3,SAP30BP,RNASEH2C,RPP40,NSMCE1,PIN1,TUBD1,RNF5,REX1BD,HSD11B1L,FASTK,DXO,CCDC57,RABL2B,HINT1,POLR1D,SKA3,EPOR,ARFIP2,WDR89,IFT52,CENPX,ROM1,DPM2,SLC50A1,QPCTL,LYSMD4,HMCES,N4BP2L2,CACYBP,RPS27A,MRPL46,TRAPPC12,BCCIP,DNAJC1,ULK3,RPL26L1,STK16,KCTD13,HIRIP3,CCNQ,ABITRAM,CLK4,UBE2T,EBNA1BP2,PPIH,COG4,SPRN,FAM104B,ARHGAP19,SIAH1,GTF2H5,SNX11,BNIP1,UQCC2,ILKAP,LYPLAL1,METTL17,UROD,SNHG32,CBY1,WDR83,USF1,RABL2A,H3-3A,MTFMT,SLC25A29,COPS3,CBX1,B3GALT6,CAMKMT,FANCF,C4orf46,ILF2,NIP7,TMEM101,ZFP62,RUVBL1,NKAPD1,PIGZ,SPOUT1,SRSF2,CUL9,MTLN,TSEN54,LRRC37B,MRPL57,FADS3,LMNTD2,FAM193B,PNKP,SLC25A28,COG7,CZIB,NFYB,DCUN1D5,RPA3,VCPKMT,TMEM50B,EIF3K,POLM,RABEPK,JMJD4,SCNM1,RTRAF,NDUFB3,GLI4,NDUFB8,YWHAE,RSBN1,ATG12,NDUFAF3,MIX23,PFDN2,ARHGEF39,FAM111A,ACYP2,GCFC2,RPL37A,ANKMY1,NUTF2,C6orf52,INTS11,EZH2,DUS2,ZNF44,MAN1B1,TAF7,CHCHD2,NAA38,KANSL2,ELP4,TCTA,TPT1,CCDC137,IFT80,ABTB1,C11orf98,C4orf33,TBCB,SYCE1L,ZC3H8,METTL16,GNL2,PGBD1,LENG1,TMEM186,FNTA,MASTL,TADA2A,PEX11G,ATF4,LRR1,CETN3,USP40,TSG101,ZSWIM1,COMMD1,TATDN2,LTB4R,NUDT22,TMEM218,OGFR,MICU1,C2orf68,MRE11,RBM6,TRMT13,MRPL15,RPS23,TMEM134,ORAI3,LYRM7,TMEM91,SPC25,MKKS,UBAC1,EPM2AIP1,LSM1,PSME3IP1,PPP1R14B,RBM8A,UBXN11,PHF5A,CROCC,CERS5,RSAD1,PCGF6,RP9,NCBP2,MVD,RFC2,SRSF7,PSME2,TBRG4,ATAT1,ATP5F1E,PEF1,CTBP1,POMT1,CUTC,AKAP8,CDPF1,FANCG,MRPL47,POMGNT1,UBE2J2,KATNBL1,NME2,MTIF3,NDUFA7,MTX1,PIGC,TBP,SLX4IP,EFNA4,DCAKD,CCDC115,CLK3,UQCRB,ABCB8,MSL3,RAC3,TYK2,MC1R,COQ4,TDP1,PTCD3,ECI1,RAD1,ACBD4,LRRC23,TMEM223,CSTF3,TIGD6,ENTR1,RHPN1,SP4,PPIE,CLDN15,SETD6,ZNF34,FAM117A,NDOR1,C9orf116,MZT2B,CETN2,APOO,TMEM128,ASF1B,DPM3,NDUFA10,GON7,POLR2D,CCNL1,PSPH,ANKRD54,SUMO1,RASSF7,MEAF6,TMEM60,RBM45,YAE1,NSMCE2,EGFL8,NR2C2AP,RNFT1,GEMIN2,VIPAS39,DDX31,ABI1,EIF2B3,MED4,PEX14,RETREG3,TMUB2,ZNF3,CIAO2B,MOCS2,ABCD4,PTPN2,AAMDC,MRPL27,POLE,VPS33B,KPTN,CSKMT,LIPT1,PDE6D,PNN,DSN1,MICOS10,KATNA1,BBS4,CBX8,TRA2A,RNF126,ALKBH1,SMARCD3,RPS13,CEP131,DUS1L,NEURL4,PDSS1,CNTROB,IMMP1L,RPS17,TPRA1,CHEK2,NELFB,CFDP1,RPS29,TAF9B,SLC26A6,IRF3,C7orf50,NRF1,DCTN3,COQ5,SNF8,PIGL,USP39,MIF4GD,ARV1,DDX39A,DCAF8,STAG3L5P-PVRIG2P-PILRB,LIN37,RTN4IP1,CENPN,PPP1R16A,SS18L2,SUPT7L,QSOX2,MED31,OSGEPL1,ZGLP1,PACS2,UROS,VAMP2,ANAPC7,C1orf50,DNAJB2,EXOG,TMEM99,PUS3,ANAPC2,BEND5,UFD1,COX17,RABAC1,PRIMPOL,ELMOD3,TTLL1,PPP2R3C,GPATCH3,NSUN5,DNAJC7,THYN1,MRPS18C,LIAS,SLC25A17,ETFB,CNBP,GTF2A2,COX15,FAF1,LRRC29,AUP1,C12orf76,FAM228B,ZDHHC16,TIGD1,CDC26,RPL36A,THAP3,CLASRP,CWC25,HMGN1,TTC32,ZMAT1,UTP6,ZNF18,TMA7,TEX10,ITGAE,CYP2R1,YBEY,POMZP3,RBM48,KLHDC3,TYSND1,AARSD1,RBM5,RPS19BP1,NKTR,THAP8,TMEM11,PARP6,NDUFV3,NMRK1,C17orf80,TRA2B,CRIPT,TIPIN,CYHR1,SIRT6,HSPB11,USPL1,LIG1,NELFA,TRAPPC2,SNRPB2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| Only predicted by TDF | | NPDC1,C14orf93,YDJC,ALG5,SIRT4,RP9,DNAAF2,PDCD2L,THOP1,ABHD11,KIZ,METTL12,HAUS1,OSGEPL1,ZMAT1,COMTD1,DHPS,PEX11G,PSMB3,HAUS5,ORC2,DGCR8,LIPT2,C4orf27,CCDC167,ZNF3,C11orf98,PRKRA,SUPT16H,METTL6,CHRAC1,ENDOG,OXLD1,TOMM5,LPAR2,STX16,PARK7,CRTC2,HEMK1,GPATCH3,REC8,SLC25A16,RBM5,PSME1,BCAT2,LYSMD1,C19orf44,PARP2,AIP,DYRK4,PDCD6,CENPM,MTX1,SPDL1,ING4,C2orf81,GPANK1,C9orf114,DNAJC19,SETD6,FKBPL,TOR3A,MYNN,LPCAT4,LRRC27,LBHD1,THAP9,EVL,ATG4C,ITPA,COX6A1,ALKBH4,LRWD1,NFU1,CEP89,ENOSF1,TIMM17B,FBXW9,CAMLG,SRP14,VPS33B,MAPK8IP3,SDR39U1,PSMD4,MIIP,C14orf79,METTL16,CNBP,CCDC66,MZF1,HINT2,LSM2,C3orf62,SLC25A14,FAM160B2,BANF1,NDUFB5,GMNN,TDP2,C15orf57,RPSA,FAM96A,FBXO46,HMGB2,C9orf40,KIAA0907,TMEM44,C14orf2,NDUFAB1,CHEK2,TSEN54,TSG101,MANBAL,HSCB,C6orf52,ARHGEF1,PSMA2,SETD4,RNF126,MRM1,PPCDC,NT5M,ACCS,CCDC137,INO80C,FAIM,NT5C,KPTN,UBE2T,PBX4,GSTO2,NDUFA5,GGA1,NABP2,C14orf142,MAGEF1,ECI1,C9orf3,IFI27L1,SYMPK,SCNM1,NELFCD,ATPIF1,FANCG,TAF5,S100A13,RPL35,FAM111A,CYTH2,MFSD8,ARPC5L,NR2C2AP,GTF2H5,PTCD1,S100PBP,TRIT1,NUPL2,AMZ2,NIT2,AARSD1,SENP5,RBM6,ERCC3,STK32C,NAA20,ZMYND19,COG7,C1orf131,MRPL47,UFSP1,C16orf91,USMG5,ODF2,AP4B1,ADSL,MDM4,SAR1A,UXT | | Exist in public source | | NA |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | CIC,ABHD2,CLTC,ATP2A2,MAPK1,SEC14L1,RAB11FIP1,FBXL14,CES2,PNPO,FURIN,ESYT1,MYH9,ATP1A1,HSPG2,TMEM127,KIF13B,ACTN4,SEC31A,TMBIM1,SURF4,MYADM,IQGAP1,VCAN,SSH1,ARF3,SH3PXD2B,PLEKHB2,ITPR2,NOTCH2,EIF4G1,IQGAP2,MINK1,DPP3,TMBIM6,ATP6V0C,SAMD4B,MPRIP,PSMD1,PHACTR2,NFIC,MAN2B2,SLC39A14,MFGE8,PLBD2,MYO1C,RAB35,ALAS1 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000227540 | ENST00000394864 | exon_skip_290158 | chr17:42953723-42953778 | -8.45 | -0.1724 | AARSD1 | ENST00000427569 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_319223 | chr19:43526200-43526349 | -17.12 | -0.1338 | ETHE1 | ENST00000292147 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_11029 | chr1:154989559-154989707 | -14.92 | -0.1554 | FLAD1 | ENST00000292180 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_303345 | chr19:17227839-17228005 | -19.21 | -0.1353 | OCEL1 | ENST00000215061 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_309204 | chr19:49181348-49181461 | -17.05 | -0.1522 | TRPM4 | ENST00000252826 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_353131 | chr20:58669290-58669453 | -15.95 | -0.1003 | STX16 | ENST00000371141 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_377198 | chr3:123130479-123130616 | -11.65 | -0.1022 | PDIA5 | ENST00000316218 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_382458 | chr3:38131595-38131638 | -7.57 | -0.1802 | ACAA1 | ENST00000333167 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_494079 | chr8:144099080-144099205 | -15.42 | -0.1455 | SHARPIN | ENST00000398712 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_7523 | chr1:78660553-78660654 | -9.93 | -0.1839 | IFI44 | ENST00000370747 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_16568 | chr1:201989382-201989531 | -16.45 | -0.1228 | RNPEP | ENST00000295640 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_41813 | chr10:68337857-68337996 | -13.56 | -0.1490 | HNRNPH3 | ENST00000265866 | Frame-shift | | ENSG00000227540 | ENST00000457758 | exon_skip_41841 | chr10:68756272-68756483 | -19.26 | -0.1146 | CCAR1 | ENST00000265872 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_52891 | chr10:98429790-98429889 | -16.46 | -0.1983 | HPS1 | ENST00000325103,ENST00000361490 | In-frame | | ENSG00000227540 | ENST00000394864 | exon_skip_53559 | chr10:101793912-101793998 | -8.01 | -0.1511 | OGA | ENST00000361464 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_74009 | chr11:64773429-64773505 | -7.78 | -0.1341 | SF1 | ENST00000377390 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_87733 | chr12:120571190-120571291 | -12.50 | -0.2016 | RNF10 | ENST00000325954 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_92074 | chr12:50142052-50142110 | -6.59 | -0.2865 | CERS5 | ENST00000317551 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_95407 | chr12:95040475-95040597 | -11.64 | -0.1078 | NR2C1 | ENST00000333003 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_108095 | chr14:73955450-73955509 | -9.30 | -0.1722 | COQ6 | ENST00000334571 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_111863 | chr14:23565815-23565892 | -10.02 | -0.1392 | AP1G2 | ENST00000308724,ENST00000397120 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_114365 | chr14:74290026-74290118 | -12.70 | -0.1814 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_129047 | chr15:72353690-72353737 | -7.19 | -0.2479 | HEXA | ENST00000268097 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_139422 | chr16:89114338-89114487 | -14.94 | -0.1176 | ACSF3 | ENST00000317447,ENST00000406948 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_283774 | chr17:78171509-78171649 | -11.35 | -0.1437 | SYNGR2 | ENST00000225777,ENST00000585591 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_287763 | chr17:28884224-28884315 | -10.33 | -0.1693 | FLOT2 | ENST00000394908 | Frame-shift | | ENSG00000227540 | ENST00000457147 | exon_skip_335558 | chr2:240596680-240596942 | -20.15 | -0.1018 | CAPN10 | ENST00000391984 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_358821 | chr20:63943652-63943669 | -7.62 | -0.6350 | UCKL1 | ENST00000354216 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_370518 | chr22:50247691-50247776 | -10.57 | -0.1678 | HDAC10 | ENST00000216271 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_380242 | chr3:186784961-186785101 | -12.43 | -0.1002 | EIF4A2 | ENST00000323963 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_384420 | chr3:49812647-49812738 | -14.09 | -0.2042 | UBA7 | ENST00000333486 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_433210 | chr4:177436275-177436351 | -7.41 | -0.2390 | AGA | ENST00000264595 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_442657 | chr5:74730259-74730398 | -12.96 | -0.1309 | GFM2 | ENST00000296805,ENST00000509430 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_470226 | chr7:103307595-103307708 | -11.15 | -0.1527 | PMPCB | ENST00000249269 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_374581 | chr3:50110378-50110463 | -9.14 | -0.1187 | RBM5 | ENST00000347869 | Frame-shift | | ENSG00000227540 | ENST00000394864 | exon_skip_6419 | chr1:51756319-51756358 | -8.99 | -0.3100 | OSBPL9 | ENST00000428468 | In-frame | | ENSG00000227540 | ENST00000394864 | exon_skip_445390 | chr5:150403120-150403312 | -21.25 | -0.1194 | CD74 | ENST00000009530 | In-frame | | ENSG00000227540 | ENST00000394864 | exon_skip_454626 | chr6:144827347-144827386 | -7.24 | -0.1856 | UTRN | ENST00000367545 | In-frame |
| lncRNA targets by miRNA. |
 |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000227540 | hsa-mir-22 | ENST00000457147 | chr10:73252908-73252994 | 194.00 | -80.74 | 89 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457147 | chr10:73253085-73253169 | 189.00 | -73.06 | 89 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457147 | chr10:73253178-73253261 | 157.00 | -76.32 | 87 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457147 | chr10:73252799-73252893 | 151.00 | -77.91 | 93 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457147 | chr10:73253274-73253355 | 148.00 | -69.18 | 83 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457758 | chr10:73253120-73253201 | 196.00 | -75.58 | 84 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457758 | chr10:73253210-73253293 | 157.00 | -76.32 | 87 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000457758 | chr10:73253306-73253387 | 148.00 | -69.18 | 83 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000394864 | chr10:73253339-73253420 | 189.00 | -68.99 | 81 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000394864 | chr10:73253429-73253512 | 157.00 | -76.32 | 87 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000394864 | chr10:73253204-73253292 | 155.00 | -73.85 | 88 | NA | | ENSG00000227540 | hsa-mir-22 | ENST00000394864 | chr10:73253525-73253606 | 148.00 | -69.18 | 83 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000227540 | ENSG00000004777 | ARHGAP33 | ACC,BLCA,CESC,CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,SKCM,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000065357 | DGKA | ACC,CHOL,KIRC,KIRP,LAML,THYM | CHOL | | | ENSG00000227540 | ENSG00000076928 | ARHGEF1 | ACC,CHOL,KICH,KIRC,KIRP,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000100271 | TTLL1 | ACC,CHOL,DLBC,KICH,LAML,LGG,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000104899 | AMH | ACC,CHOL,DLBC,LGG,PAAD | CHOL | | | ENSG00000227540 | ENSG00000105486 | LIG1 | ACC,CESC,CHOL,HNSC,KIRC,KIRP,PAAD,TGCT,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000106462 | EZH2 | ACC,CHOL,HNSC,KIRC,KIRP,SKCM,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000106976 | DNM1 | ACC,CHOL,KIRC,KIRP,PAAD | CHOL | | | ENSG00000227540 | ENSG00000107281 | NPDC1 | ACC,CHOL,LGG,PAAD,SARC | CHOL | | | ENSG00000227540 | ENSG00000111665 | CDCA3 | ACC,BLCA,CHOL,HNSC,THYM | CHOL | | | ENSG00000227540 | ENSG00000119640 | ACYP1 | ACC,BLCA,BRCA,CESC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,OV,PAAD,READ,SARC,SKCM,STAD,THCA,THYM,UCEC,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000121289 | CEP89 | ACC,CHOL,HNSC,KICH,KIRC,KIRP,LAML,PAAD,UVM | CHOL | | | ENSG00000227540 | ENSG00000123136 | DDX39A | ACC,CHOL,GBM,HNSC,KICH,KIRC,KIRP,LGG,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000127586 | CHTF18 | ACC,BLCA,BRCA,CHOL,DLBC,ESCA,HNSC,KIRC,KIRP,LGG,SARC,THCA,THYM,UCS | CHOL | | | ENSG00000227540 | ENSG00000131188 | PRR7 | ACC,CHOL,HNSC,KIRC,KIRP,PAAD,SARC,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000135723 | FHOD1 | ACC,CHOL,KICH,KIRP,TGCT | CHOL | | | ENSG00000227540 | ENSG00000135736 | CCDC102A | ACC,CHOL,KICH,KIRP,LAML,THCA | CHOL | | | ENSG00000227540 | ENSG00000143748 | NVL | ACC,CHOL,ESCA,HNSC,KICH,LAML,LGG,UVM | CHOL | | | ENSG00000227540 | ENSG00000149636 | DSN1 | ACC,BLCA,CESC,CHOL,COAD,ESCA,GBM,HNSC,KIRP,READ,SKCM,TGCT,THYM,UCEC,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000151849 | CENPJ | ACC,CHOL,HNSC,KIRP,TGCT,UVM | CHOL | | | ENSG00000227540 | ENSG00000158062 | UBXN11 | ACC,BLCA,BRCA,CESC,CHOL,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,PAAD,READ,SARC,SKCM,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000163156 | SCNM1 | ACC,BRCA,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,READ,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000163584 | RPL22L1 | ACC,CHOL,KIRC,LAML,LGG,SARC | CHOL | | | ENSG00000227540 | ENSG00000163918 | RFC4 | ACC,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LAML,READ,SKCM,THYM,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000164611 | PTTG1 | ACC,BLCA,CESC,CHOL,ESCA,GBM,HNSC,KIRC,READ,THYM | CHOL | | | ENSG00000227540 | ENSG00000166135 | HIF1AN | ACC,CHOL,LAML,PAAD,TGCT | CHOL | | | ENSG00000227540 | ENSG00000166508 | MCM7 | ACC,CHOL,DLBC,HNSC,KIRP,LGG,THYM | CHOL | | | ENSG00000227540 | ENSG00000176454 | LPCAT4 | ACC,CHOL,KIRC,KIRP,LAML,TGCT,UVM | CHOL | | | ENSG00000227540 | ENSG00000184162 | NR2C2AP | ACC,BLCA,BRCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KIRC,KIRP,LGG,PAAD,READ,SARC,TGCT,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000204130 | RUFY2 | ACC,CHOL,KICH,KIRP,SKCM,STAD,UCS | CHOL | | | ENSG00000227540 | ENSG00000204305 | AGER | ACC,BRCA,CHOL,HNSC,KIRC,KIRP,LGG,PAAD,TGCT,UCEC,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000205208 | C4orf46 | ACC,CHOL,GBM,HNSC,KICH,KIRP,READ,SKCM,UVM | CHOL | | | ENSG00000227540 | ENSG00000205593 | DENND6B | ACC,CHOL,HNSC,KICH,KIRC,KIRP,PAAD,SARC,THCA | CHOL | | | ENSG00000227540 | ENSG00000213551 | DNAJC9 | ACC,BLCA,BRCA,CESC,CHOL,ESCA,HNSC,PAAD,SKCM,STAD,TGCT,UCEC,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000217555 | CKLF | ACC,CHOL,GBM,HNSC,KICH,OV,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000221829 | FANCG | ACC,BLCA,CHOL,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000230124 | ACBD6 | ACC,BLCA,CHOL,ESCA,HNSC,KICH,KIRC,LAML,LGG,PAAD,THCA,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000250067 | YJEFN3 | ACC,CHOL,DLBC,KIRC,KIRP,LGG,PAAD,SARC,UCEC,UVM | CHOL | | | ENSG00000227540 | ENSG00000258839 | MC1R | ACC,CHOL,KIRP,LGG,PAAD,TGCT,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000273899 | NOL12 | ACC,BRCA,CESC,CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,SARC,STAD,TGCT,THCA,THYM,UCEC | CHOL | | | ENSG00000227540 | ENSG00000275023 | MLLT6 | ACC,CHOL,KICH,KIRP,PAAD,UVM | CHOL | | | ENSG00000227540 | ENSG00000005448 | WDR54 | BLCA,CHOL,ESCA,HNSC,KICH,KIRP,LGG,PAAD,THYM | CHOL | | | ENSG00000227540 | ENSG00000105011 | ASF1B | BLCA,CHOL,ESCA,HNSC,THYM | CHOL | | | ENSG00000227540 | ENSG00000106268 | NUDT1 | BLCA,CHOL,DLBC,ESCA,HNSC,KIRC,KIRP,LGG,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000107833 | NPM3 | BLCA,BRCA,CHOL,COAD,ESCA,GBM,HNSC,KIRC,LAML,LGG,SARC | CHOL | | | ENSG00000227540 | ENSG00000109881 | CCDC34 | BLCA,CHOL,COAD,DLBC,ESCA,HNSC,SKCM,THCA,UCEC,UVM | CHOL | | | ENSG00000227540 | ENSG00000122952 | ZWINT | BLCA,CESC,CHOL,ESCA,HNSC,KICH,SKCM,UCS | CHOL | | | ENSG00000227540 | ENSG00000137135 | ARHGEF39 | BLCA,CESC,CHOL,HNSC,THYM | CHOL | | | ENSG00000227540 | ENSG00000154102 | C16orf74 | BLCA,CHOL,DLBC,PAAD,READ,THCA | CHOL | | | ENSG00000227540 | ENSG00000160051 | IQCC | BLCA,CESC,CHOL,COAD,GBM,HNSC,KICH,KIRC,KIRP,LAML,PAAD,READ,SARC,SKCM,THCA,UCEC,UVM | CHOL | | | ENSG00000227540 | ENSG00000160298 | C21orf58 | BLCA,CESC,CHOL,DLBC,ESCA,HNSC,LAML,PAAD,SKCM,STAD,THYM,UCS | CHOL | | | ENSG00000227540 | ENSG00000165752 | STK32C | BLCA,CHOL,HNSC,KICH,KIRC,KIRP,PAAD,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000167523 | SPATA33 | BLCA,BRCA,CHOL,COAD,DLBC,ESCA,HNSC,KIRC,KIRP,PAAD,SARC,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000168393 | DTYMK | BLCA,CHOL,COAD,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,READ,THYM | CHOL | | | ENSG00000227540 | ENSG00000182173 | TSEN54 | BLCA,CHOL,COAD,DLBC,HNSC,KICH,KIRC,KIRP,LGG,PAAD,READ,SARC,THCA,THYM,UCS | CHOL | | | ENSG00000227540 | ENSG00000213185 | FAM24B | BLCA,CESC,CHOL,PAAD,THYM,UCS | CHOL | | | ENSG00000227540 | ENSG00000240230 | COX19 | BLCA,CHOL,DLBC,HNSC,KIRC,KIRP,STAD,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000107816 | LZTS2 | BRCA,CHOL,HNSC,KIRC,KIRP,LAML,LGG,UCS | CHOL | | | ENSG00000227540 | ENSG00000111671 | SPSB2 | BRCA,CHOL,DLBC,HNSC,KIRC,THCA | CHOL | | | ENSG00000227540 | ENSG00000142330 | CAPN10 | BRCA,CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,SARC,THCA,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000166925 | TSC22D4 | BRCA,CHOL,PAAD,THYM,UCS | CHOL | | | ENSG00000227540 | ENSG00000168096 | ANKS3 | BRCA,CHOL,DLBC,HNSC,KIRC,KIRP,LGG,PAAD,SARC,SKCM,THCA,UCEC,UVM | CHOL | | | ENSG00000227540 | ENSG00000241343 | RPL36A | BRCA,CHOL,COAD,ESCA,GBM,HNSC,KIRP,LGG,OV,READ,SKCM,TGCT,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000123219 | CENPK | CESC,CHOL,ESCA,GBM,HNSC,READ,SKCM | CHOL | | | ENSG00000227540 | ENSG00000164104 | HMGB2 | CESC,CHOL,HNSC,KIRC,SKCM,THYM,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000171960 | PPIH | CESC,CHOL,COAD,ESCA,GBM,HNSC,KICH,KIRC,KIRP,READ,SKCM,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000006025 | OSBPL7 | CHOL,DLBC,KICH,KIRC,KIRP,LAML,LGG,THCA,UCS | CHOL | | | ENSG00000227540 | ENSG00000010626 | LRRC23 | CHOL,COAD,KICH,KIRP,LAML,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000046651 | OFD1 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,PAAD,READ,SKCM,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000064547 | LPAR2 | CHOL,HNSC,KIRC,KIRP,LGG,TGCT,THCA | CHOL | | | ENSG00000227540 | ENSG00000077463 | SIRT6 | CHOL,HNSC,KIRC,KIRP,LGG,PAAD,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000089289 | IGBP1 | CHOL,GBM,HNSC,LGG,READ | CHOL | | | ENSG00000227540 | ENSG00000089820 | ARHGAP4 | CHOL,DLBC,HNSC,KIRC,KIRP,THYM | CHOL | | | ENSG00000227540 | ENSG00000091651 | ORC6 | CHOL,COAD,ESCA,HNSC,READ,SKCM | CHOL | | | ENSG00000227540 | ENSG00000105771 | SMG9 | CHOL,HNSC,KIRC,KIRP,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000108468 | CBX1 | CHOL,ESCA,KICH,PAAD,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000115687 | PASK | CHOL,HNSC,KIRP,SKCM,TGCT | CHOL | | | ENSG00000227540 | ENSG00000115840 | SLC25A12 | CHOL,LAML,PAAD,TGCT,UVM | CHOL | | | ENSG00000227540 | ENSG00000120334 | CENPL | CHOL,ESCA,GBM,HNSC,READ | CHOL | | | ENSG00000227540 | ENSG00000125459 | MSTO1 | CHOL,KICH,KIRC,KIRP,LAML,LGG | CHOL | | | ENSG00000227540 | ENSG00000125835 | SNRPB | CHOL,COAD,ESCA,GBM,HNSC,KIRC,KIRP,OV,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000126457 | PRMT1 | CHOL,HNSC,KICH,KIRC,KIRP,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000127415 | IDUA | CHOL,DLBC,KIRC,KIRP,LGG,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000130590 | SAMD10 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,SARC | CHOL | | | ENSG00000227540 | ENSG00000131094 | C1QL1 | CHOL,ESCA,HNSC,LGG,PAAD | CHOL | | | ENSG00000227540 | ENSG00000131470 | PSMC3IP | CHOL,ESCA,HNSC,KIRC,KIRP,PAAD,SKCM,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000132004 | FBXW9 | CHOL,DLBC,HNSC,KICH,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000135596 | MICAL1 | CHOL,KIRC,KIRP,LGG,TGCT | CHOL | | | ENSG00000227540 | ENSG00000135845 | PIGC | CHOL,COAD,ESCA,GBM,HNSC,KICH,LAML,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000138002 | IFT172 | CHOL,KICH,KIRP,LAML,TGCT,THCA | CHOL | | | ENSG00000227540 | ENSG00000138834 | MAPK8IP3 | CHOL,DLBC,KIRC,KIRP,PAAD,SKCM,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000139266 | MARCHF9 | CHOL,HNSC,KIRP,PAAD,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000139624 | CERS5 | CHOL,HNSC,KICH,KIRC,KIRP,LGG,PAAD,TGCT,UCEC,UCS | CHOL | | | ENSG00000227540 | ENSG00000141569 | TRIM65 | CHOL,HNSC,KICH,KIRC,KIRP,LAML | CHOL | | | ENSG00000227540 | ENSG00000143258 | USP21 | CHOL,HNSC,KICH,KIRC,KIRP,LGG,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000143643 | TTC13 | CHOL,KICH,KIRP,SKCM,UVM | CHOL | | | ENSG00000227540 | ENSG00000144134 | RABL2A | CHOL,KIRC,KIRP,LAML,PAAD,THCA | CHOL | | | ENSG00000227540 | ENSG00000148341 | SH3GLB2 | CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,SARC,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000148814 | LRRC27 | CHOL,KIRP,LAML,LGG,THCA,UCS | CHOL | | | ENSG00000227540 | ENSG00000148908 | RGS10 | CHOL,DLBC,HNSC,TGCT,THYM | CHOL | | | ENSG00000227540 | ENSG00000152253 | SPC25 | CHOL,COAD,GBM,HNSC,PAAD,READ,THYM | CHOL | | | ENSG00000227540 | ENSG00000158106 | RHPN1 | CHOL,HNSC,KIRC,KIRP,LAML,PAAD,SARC,THCA,THYM | CHOL | | | ENSG00000227540 | ENSG00000159239 | RP11-523H20.5 | CHOL,DLBC,KICH,KIRC,KIRP,PAAD | CHOL | | | ENSG00000227540 | ENSG00000162373 | BEND5 | CHOL,KICH,PAAD,THCA,THYM,UVM | CHOL | | | ENSG00000227540 | ENSG00000166012 | TAF1D | CHOL,GBM,KIRC,KIRP,LAML,LGG,READ,SKCM,STAD,UVM | CHOL | | | ENSG00000227540 | ENSG00000167702 | KIFC2 | CHOL,KIRC,KIRP,PAAD,SARC,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000174943 | KCTD13 | CHOL,HNSC,KIRC,KIRP,PAAD,TGCT,THCA | CHOL | | | ENSG00000227540 | ENSG00000177548 | RABEP2 | CHOL,DLBC,HNSC,KIRP,THCA | CHOL | | | ENSG00000227540 | ENSG00000178093 | TSSK6 | CHOL,DLBC,KICH,KIRP,LGG,THCA | CHOL | | | ENSG00000227540 | ENSG00000184445 | KNTC1 | CHOL,HNSC,KIRC,KIRP,SKCM,TGCT | CHOL | | | ENSG00000227540 | ENSG00000185101 | ANO9 | CHOL,DLBC,HNSC,KIRC,KIRP | CHOL | | | ENSG00000227540 | ENSG00000185158 | LRRC37B | CHOL,KIRC,KIRP,LGG,PAAD,SKCM,TGCT,THCA | CHOL | | | ENSG00000227540 | ENSG00000185917 | SETD4 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,PAAD,TGCT,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000187109 | NAP1L1 | CHOL,ESCA,HNSC,LAML,LGG,UVM | CHOL | | | ENSG00000227540 | ENSG00000189159 | JPT1 | CHOL,GBM,KICH,KIRC,LGG,THYM | CHOL | | | ENSG00000227540 | ENSG00000197774 | EME2 | CHOL,DLBC,KIRC,KIRP,LGG,PAAD,THCA,UVM | CHOL | | | ENSG00000227540 | ENSG00000197948 | FCHSD1 | CHOL,KICH,KIRC,KIRP,PAAD | CHOL | | | ENSG00000227540 | ENSG00000204387 | SNHG32 | CHOL,COAD,ESCA,GBM,HNSC,LGG,PAAD,SARC,THCA | CHOL | | | ENSG00000227540 | ENSG00000205078 | SYCE1L | CHOL,DLBC,HNSC,KIRC,KIRP,PAAD,READ,UCS | CHOL | | | ENSG00000227540 | ENSG00000205084 | TMEM231 | CHOL,ESCA,KICH,READ,UVM | CHOL | | | ENSG00000227540 | ENSG00000205629 | LCMT1 | CHOL,COAD,HNSC,KICH,LGG,PAAD | CHOL | | | ENSG00000227540 | ENSG00000213139 | CRYGS | CHOL,DLBC,KIRP,LAML,PAAD,TGCT | CHOL | | | ENSG00000227540 | ENSG00000214021 | TTLL3 | CHOL,KIRC,KIRP,LGG,SKCM,THCA,UCS | CHOL | | | ENSG00000227540 | ENSG00000214756 | CSKMT | CHOL,GBM,HNSC,LGG,OV,PAAD,READ,SARC,THCA | CHOL | | | ENSG00000227540 | ENSG00000215440 | NPEPL1 | CHOL,HNSC,KIRC,KIRP,PAAD,THCA,UCS,UVM | CHOL | | | ENSG00000227540 | ENSG00000243678 | NME2 | CHOL,GBM,HNSC,KICH,KIRC,READ | CHOL | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000152240 | HAUS1 | 5 | CHOL,GBM,HNSC,KIRP,SKCM | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000128694 | OSGEPL1 | 10 | CHOL,GBM,HNSC,KIRP,LAML,LGG,READ,SKCM,THCA,UCEC | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000166432 | ZMAT1 | 5 | CHOL,KIRC,KIRP,LGG,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000206562 | METTL6 | 6 | CHOL,GBM,HNSC,LAML,READ,SKCM | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000124222 | STX16 | 6 | CHOL,HNSC,KIRC,KIRP,LAML,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000114735 | HEMK1 | 6 | CHOL,KIRC,KIRP,LAML,LGG,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000003756 | RBM5 | 6 | ACC,CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000003756 | RBM5 | 8 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,PRAD,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000129484 | PARP2 | 7 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000111653 | ING4 | 7 | CHOL,GBM,HNSC,KIRP,LAML,SKCM,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000198917 | SPOUT1 | 5 | ACC,CHOL,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000205981 | DNAJC19 | 5 | GBM,HNSC,READ,SKCM,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000103037 | SETD6 | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000103037 | SETD6 | 6 | CHOL,KIRC,KIRP,LAML,SKCM,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000138834 | MAPK8IP3 | 5 | CHOL,KIRC,KIRP,SKCM,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000100445 | SDR39U1 | 5 | CHOL,HNSC,KIRC,LGG,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000099326 | MZF1 | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000099326 | MZF1 | 6 | CHOL,HNSC,KIRC,KIRP,SKCM,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000188315 | C3orf62 | 6 | ACC,CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000188315 | C3orf62 | 5 | CHOL,KIRC,KIRP,SKCM,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000102078 | SLC25A14 | 6 | CHOL,HNSC,KIRC,KIRP,LAML,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000132680 | KHDC4 | 7 | GBM,HNSC,KIRC,KIRP,LAML,LGG,SKCM | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000185917 | SETD4 | 7 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000110455 | ACCS | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000110455 | ACCS | 6 | CHOL,HNSC,KIRC,KIRP,SKCM,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000100083 | GGA1 | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000100083 | GGA1 | 5 | CHOL,HNSC,KIRC,KIRP,LGG | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000164073 | MFSD8 | 5 | CHOL,HNSC,LAML,READ,SKCM | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000043514 | TRIT1 | 7 | CHOL,GBM,KIRP,READ,SKCM,THCA,UCEC | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000136243 | NUP42 | 8 | CHOL,GBM,HNSC,KIRC,KIRP,READ,SKCM,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000266967 | AARSD1 | 7 | CHOL,KIRC,KIRP,LAML,LGG,SKCM,THCA | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000004534 | RBM6 | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000004534 | RBM6 | 10 | CHOL,HNSC,KIRC,KIRP,LAML,LGG,PRAD,SKCM,THCA,UCEC | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000163161 | ERCC3 | 5 | CHOL,HNSC,KIRC,KIRP,PAAD | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000163161 | ERCC3 | 6 | CHOL,HNSC,KIRC,KIRP,LAML,LGG | | ENSG00000227540 | ENSG00000141258 | SGSM2 | ENSG00000134262 | AP4B1 | 5 | ACC,CHOL,HNSC,KIRC,KIRP | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000134262 | AP4B1 | 7 | CHOL,HNSC,KIRC,KIRP,LAML,SKCM,THCA | | ENSG00000227540 | ENSG00000236287 | ZBED5 | ENSG00000198625 | MDM4 | 5 | CHOL,HNSC,KIRP,SKCM,THCA |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000227540 | ENST00000457147 | ALAS1 | ENSG00000023330 | ENST00000394965 | -0.1366 | 42 | - | CHOL | | ENSG00000227540 | ENST00000457147 | ALAS1 | ENSG00000023330 | ENST00000310271 | -0.1061 | 45 | - | CHOL | | ENSG00000227540 | ENST00000457147 | ALAS1 | ENSG00000023330 | ENST00000484952 | -0.1940 | 77 | - | CHOL | | ENSG00000227540 | ENST00000457147 | ALAS1 | ENSG00000023330 | ENST00000493402 | -0.3420 | 144 | - | CHOL | | ENSG00000227540 | ENST00000457147 | PNPO | ENSG00000108439 | ENST00000585320 | -0.1301 | 265 | - | CHOL | | ENSG00000227540 | ENST00000457147 | ITPR2 | ENSG00000123104 | ENST00000242737 | -0.5079 | 252 | - | CHOL | | ENSG00000227540 | ENST00000457147 | TMBIM6 | ENSG00000139644 | ENST00000552635 | -0.1134 | 48 | - | CHOL | | ENSG00000227540 | ENST00000457147 | TMBIM6 | ENSG00000139644 | ENST00000552370 | -0.2482 | 265 | - | CHOL | | ENSG00000227540 | ENST00000457147 | IQGAP2 | ENSG00000145703 | ENST00000396234 | -0.1353 | 166 | - | CHOL,LUSC | | ENSG00000227540 | ENST00000457147 | IQGAP2 | ENSG00000145703 | ENST00000502745 | -0.1353 | 159 | - | CHOL,LUSC | | ENSG00000227540 | ENST00000457147 | IQGAP2 | ENSG00000145703 | ENST00000513534 | -0.1179 | 35 | - | CHOL,LUSC | | ENSG00000227540 | ENST00000457758 | ALAS1 | ENSG00000023330 | ENST00000484952 | -0.1448 | 1 | - | CHOL | | ENSG00000227540 | ENST00000457758 | ALAS1 | ENSG00000023330 | ENST00000493402 | -0.2583 | 165 | - | CHOL | | ENSG00000227540 | ENST00000457758 | PNPO | ENSG00000108439 | ENST00000584061 | -0.1176 | 1 | - | CHOL | | ENSG00000227540 | ENST00000457758 | ITPR2 | ENSG00000123104 | ENST00000242737 | -0.4764 | 11 | - | CHOL | | ENSG00000227540 | ENST00000457758 | TMBIM6 | ENSG00000139644 | ENST00000552370 | -0.5327 | 118 | - | CHOL | | ENSG00000227540 | ENST00000457758 | CES2 | ENSG00000172831 | ENST00000564420 | -0.1093 | 50 | - | CHOL | | ENSG00000227540 | ENST00000394864 | ALAS1 | ENSG00000023330 | ENST00000484952 | -0.1047 | 349 | - | CHOL | | ENSG00000227540 | ENST00000394864 | ALAS1 | ENSG00000023330 | ENST00000493402 | -0.2583 | 247 | - | CHOL | | ENSG00000227540 | ENST00000394864 | SLC39A14 | ENSG00000104635 | ENST00000359741 | -0.1069 | 1 | - | CHOL | | ENSG00000227540 | ENST00000394864 | SLC39A14 | ENSG00000104635 | ENST00000381237 | -0.1069 | 1 | - | CHOL | | ENSG00000227540 | ENST00000394864 | SLC39A14 | ENSG00000104635 | ENST00000289952 | -0.1069 | 1 | - | CHOL | | ENSG00000227540 | ENST00000394864 | PNPO | ENSG00000108439 | ENST00000585320 | -0.1051 | 138 | - | CHOL | | ENSG00000227540 | ENST00000394864 | ITPR2 | ENSG00000123104 | ENST00000242737 | -0.2116 | 183 | - | CHOL | | ENSG00000227540 | ENST00000394864 | TMBIM6 | ENSG00000139644 | ENST00000552635 | -0.1443 | 1 | - | CHOL | | ENSG00000227540 | ENST00000394864 | TMBIM6 | ENSG00000139644 | ENST00000552370 | -0.5327 | 200 | - | CHOL | | ENSG00000227540 | ENST00000394864 | IQGAP2 | ENSG00000145703 | ENST00000396234 | -0.1121 | 7 | - | CHOL,LUSC | | ENSG00000227540 | ENST00000394864 | IQGAP2 | ENSG00000145703 | ENST00000502745 | -0.1121 | 1 | - | CHOL,LUSC |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,C1orf35 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,PRR14 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,ILKAP | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,RETREG3 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,BOLA1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,KAT2A | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,EXD3 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,HEXIM2 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,PAGR1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,ING5 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,HEXD | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,MRPL53 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,TSEN54 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,MRPL38 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,FBXO46 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,SNRPA | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,SUGP1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,CDK5RAP3 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,ENDOV | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,WDR83 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,RRNAD1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,PMF1 | KICH,CHOL,LGG,PAAD,KIRP | | ENSG00000227540 | RP11-152N13.5,hsa-mir-22,WBP1 | KICH,CHOL,LGG,PAAD,KIRP |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000227540.1 | ENST00000457147.1 | 60 | 218 | 400 | | ENSG00000227540.1 | ENST00000457758.1 | 66 | 331 | 531 | | ENSG00000227540.1 | ENST00000394864.2 | 66 | 122 | 322 |
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