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lncRNA: ENSG00000226476 |
Summary for LINC01748 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000226476 | Gene symbol | LINC01748 |
| Gene name | long intergenic non-protein coding RNA 1748 | |
| HGNC | 52535 | |
| Entrez ID | 105378763 | |
| Gene type | lincRNA | |
| Synonyms | LINC01748|01p32.1|RP11-776H12.1 | |
| UniProtAcc |
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Structure and expression level for LINC01748 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000226476 | 1.146892e+02 | 1.283521e+00 | 3.300779e-01 | 3.888541e+00 | 1.008490e-04 | 5.258520e-04 | UP | BLCA |
| ENSG00000226476 | 2.113599e+02 | 2.404879e+00 | 4.966377e-01 | 4.842320e+00 | 1.280000e-06 | 3.520000e-05 | UP | ESCA |
| ENSG00000226476 | 1.409347e+02 | 5.716296e+00 | 2.326110e-01 | 2.457449e+01 | 2.370000e-133 | 4.620000e-131 | UP | LUSC |
| ENSG00000226476 | 6.977429e+01 | 3.951679e+00 | 2.866860e-01 | 1.378400e+01 | 3.180000e-43 | 1.970000e-41 | UP | COAD |
| ENSG00000226476 | 7.242839e+01 | 4.740342e+00 | 5.642545e-01 | 8.401071e+00 | 4.420000e-17 | 5.050000e-15 | UP | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000226476 | 3.029716e-01 | 3.027428e-12 | COAD | 2.179748e-10 |
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lncRNA-Protein interaction for LINC01748 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000226476 | ENST00000439156 | RP11-776H12.1 | ENSG00000198040 | ZNF84 | 40.76 | 91.8643 | P51523 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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