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lncRNA: ENSG00000226281 |
Summary for RP1-80N2.2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000226281 | Gene symbol | RP1-80N2.2 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP1-80N2.2 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000226281 | 7.111266e+01 | -3.299259e+00 | 2.889577e-01 | -1.141779e+01 | 3.410000e-30 | 3.500000e-29 | DOWN | KIRC |
| ENSG00000226281 | 2.936067e+02 | -1.095812e+00 | 3.443509e-01 | -3.182254e+00 | 1.461334e-03 | 3.423834e-03 | DOWN | KICH |
| ENSG00000226281 | 3.726829e+01 | -3.640636e+00 | 3.415706e-01 | -1.065852e+01 | 1.590000e-26 | 7.480000e-25 | DOWN | KIRP |
| ENSG00000226281 | 3.719001e+01 | 2.727974e+00 | 3.542357e-01 | 7.701013e+00 | 1.350000e-14 | 1.370000e-13 | UP | UCEC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000226281 | -4.107038e-01 | 6.396477e-05 | KICH | 1.130605e-04 |
| ENSG00000226281 | -4.243200e-01 | 5.722973e-28 | KIRC | 1.560811e-26 |
| ENSG00000226281 | -4.911574e-01 | 3.891310e-19 | KIRP | 6.118606e-17 |
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lncRNA-Protein interaction for RP1-80N2.2 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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