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lncRNA: ENSG00000225762 |
Summary for LINC01389 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000225762 | Gene symbol | LINC01389 |
| Gene name | long intergenic non-protein coding RNA 1389 | |
| HGNC | 50661 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | LINC01389|01p33 | |
| UniProtAcc |
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Structure and expression level for LINC01389 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000225762 | 2.555633e+01 | -1.187237e+00 | 1.980276e-01 | -5.995310e+00 | 2.030000e-09 | 1.060000e-08 | DOWN | COAD |
| ENSG00000225762 | 4.167393e+01 | 1.696618e+00 | 2.335008e-01 | 7.266006e+00 | 3.700000e-13 | 8.020000e-12 | UP | STAD |
| ENSG00000225762 | 2.086397e+01 | -1.123622e+00 | 3.236833e-01 | -3.471363e+00 | 5.178240e-04 | 3.183894e-03 | DOWN | READ |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000225762 | 3.416626e-01 | 2.161575e-02 | CHOL | 2.327637e-02 |
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lncRNA-Protein interaction for LINC01389 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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