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lncRNA: ENSG00000225431 |
Summary for LINC01671 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000225431 | Gene symbol | LINC01671 |
| Gene name | long intergenic non-protein coding RNA 1671 | |
| HGNC | 52459 | |
| Entrez ID | 101928233 | |
| Gene type | lincRNA | |
| Synonyms | AP001626.1|LINC01671|21q22.3 | |
| UniProtAcc |
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Structure and expression level for LINC01671 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000225431 | 1.113682e+02 | 2.278715e+00 | 5.714179e-01 | 3.987825e+00 | 6.670000e-05 | 3.028510e-04 | UP | CHOL |
| ENSG00000225431 | 4.269474e+02 | -2.900318e+00 | 4.962729e-01 | -5.844200e+00 | 5.090000e-09 | 2.600000e-08 | DOWN | KICH |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000225431 | 4.479484e-01 | 2.030998e-03 | CHOL | 3.099944e-03 |
| ENSG00000225431 | -6.862100e-01 | 1.157739e-13 | KICH | 8.483072e-12 |
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lncRNA-Protein interaction for LINC01671 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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