 lncRNA targets the enhancer region and positively regulates the gene expression. |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | NACC1,IFNGR2,CAPZB,COTL1,PFN1,FTL,GRK2,CMTM3,SIPA1,TUBB6,MYD88 | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF |
| lncRNA targets by miRNA. |
 |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | | ENSG00000225377 | hsa-mir-511 | ENST00000414676 | chr20:320867-320950 | 184.00 | -57.13 | 88 | NA | | ENSG00000225377 | hsa-mir-511 | ENST00000414676 | chr20:320474-320560 | 159.00 | -72.88 | 88 | NA | | ENSG00000225377 | hsa-mir-511 | ENST00000414676 | chr20:320390-320479 | 148.00 | -57.41 | 88 | NA | | ENSG00000225377 | hsa-mir-511 | ENST00000442637 | chr20:320919-321002 | 184.00 | -57.13 | 88 | NA | | ENSG00000225377 | hsa-mir-511 | ENST00000442637 | chr20:320526-320612 | 159.00 | -72.88 | 88 | NA | | ENSG00000225377 | hsa-mir-511 | ENST00000442637 | chr20:320446-320531 | 152.00 | -55.48 | 87 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000414676 | chr20:320314-320361 | 168.00 | -72.43 | 38 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000414676 | chr20:320712-320781 | 151.00 | -68.16 | 66 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000414676 | chr20:320584-320670 | 143.00 | -74.67 | 83 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000442637 | chr20:320385-320450 | 161.00 | -74.43 | 70 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000442637 | chr20:320764-320833 | 151.00 | -68.16 | 66 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000442637 | chr20:320636-320722 | 143.00 | -74.67 | 83 | NA | | ENSG00000225377 | hsa-mir-1228 | ENST00000442637 | chr20:320334-320366 | 142.00 | -68.71 | 36 | NA |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name | | LncEditing_363469 | ENSG00000225377.4 | chr20 | 321883 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363562 | ENSG00000225377.4 | chr20 | 332060 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363574 | ENSG00000225377.4 | chr20 | 332845 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363591 | ENSG00000225377.4 | chr20 | 332983 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363604 | ENSG00000225377.4 | chr20 | 333457 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363608 | ENSG00000225377.4 | chr20 | 333502 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363625 | ENSG00000225377.4 | chr20 | 334794 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363628 | ENSG00000225377.4 | chr20 | 334807 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363630 | ENSG00000225377.4 | chr20 | 334820 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363631 | ENSG00000225377.4 | chr20 | 334821 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363632 | ENSG00000225377.4 | chr20 | 334827 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363634 | ENSG00000225377.4 | chr20 | 334837 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363643 | ENSG00000225377.4 | chr20 | 334978 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363647 | ENSG00000225377.4 | chr20 | 335002 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363666 | ENSG00000225377.4 | chr20 | 335073 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363673 | ENSG00000225377.4 | chr20 | 335126 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363678 | ENSG00000225377.4 | chr20 | 335537 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363695 | ENSG00000225377.4 | chr20 | 335612 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363733 | ENSG00000225377.4 | chr20 | 336518 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363735 | ENSG00000225377.4 | chr20 | 336527 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363736 | ENSG00000225377.4 | chr20 | 336528 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363749 | ENSG00000225377.4 | chr20 | 336588 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363756 | ENSG00000225377.4 | chr20 | 336698 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363765 | ENSG00000225377.4 | chr20 | 336753 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363772 | ENSG00000225377.4 | chr20 | 336789 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363773 | ENSG00000225377.4 | chr20 | 336794 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363774 | ENSG00000225377.4 | chr20 | 336795 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363775 | ENSG00000225377.4 | chr20 | 336797 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363777 | ENSG00000225377.4 | chr20 | 336821 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363797 | ENSG00000225377.4 | chr20 | 336886 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363805 | ENSG00000225377.4 | chr20 | 336940 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363858 | ENSG00000225377.4 | chr20 | 338693 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363872 | ENSG00000225377.4 | chr20 | 339075 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363875 | ENSG00000225377.4 | chr20 | 339111 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363876 | ENSG00000225377.4 | chr20 | 339137 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363886 | ENSG00000225377.4 | chr20 | 339166 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363889 | ENSG00000225377.4 | chr20 | 339169 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363894 | ENSG00000225377.4 | chr20 | 339219 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363900 | ENSG00000225377.4 | chr20 | 339367 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363904 | ENSG00000225377.4 | chr20 | 339401 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363906 | ENSG00000225377.4 | chr20 | 339432 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363907 | ENSG00000225377.4 | chr20 | 339446 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363911 | ENSG00000225377.4 | chr20 | 339476 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363912 | ENSG00000225377.4 | chr20 | 339481 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363932 | ENSG00000225377.4 | chr20 | 340052 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363944 | ENSG00000225377.4 | chr20 | 340148 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363949 | ENSG00000225377.4 | chr20 | 340321 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363953 | ENSG00000225377.4 | chr20 | 340344 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363957 | ENSG00000225377.4 | chr20 | 340379 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363959 | ENSG00000225377.4 | chr20 | 340389 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363978 | ENSG00000225377.4 | chr20 | 340478 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_363984 | ENSG00000225377.4 | chr20 | 340530 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 | | LncEditing_364043 | ENSG00000225377.4 | chr20 | 344868 | - | antisense | NRSN2-AS1 | ENST00000442637.1 | antisense | NRSN2-AS1-002 |
| Edited-associated DElncRNAs in cancer. |
 |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change | | ENSG00000225377 | LncEditing_363469 | KICH | chr20_321883_- | 1.086862e+01 | 6.939017e+00 | 1.544723e+00 | 3.400000e+00 | 6.738585e-04 | 1.498260e-03 | UP | | ENSG00000225377 | LncEditing_363625 | OV | chr20_334794_- | 8.559657e+00 | 6.568370e+00 | 2.617681e+00 | 4.156629e+00 | 3.229772e-05 | 3.837566e-05 | UP | | ENSG00000225377 | LncEditing_363628 | OV | chr20_334807_- | 8.300457e+00 | 6.326375e+00 | 2.552246e+00 | 4.872427e+00 | 1.102356e-06 | 1.436719e-06 | UP | | ENSG00000225377 | LncEditing_363630 | OV | chr20_334820_- | 8.466299e+00 | 6.719141e+00 | 2.998908e+00 | 3.372531e+00 | 7.448067e-04 | 8.182195e-04 | UP | | ENSG00000225377 | LncEditing_363632 | OV | chr20_334827_- | 8.733396e+00 | 6.479876e+00 | 2.322468e+00 | 4.393801e+00 | 1.113856e-05 | 1.357443e-05 | UP | | ENSG00000225377 | LncEditing_363634 | OV | chr20_334837_- | 9.093049e+00 | 6.324115e+00 | 1.908760e+00 | 5.787618e+00 | 7.139172e-09 | 1.091350e-08 | UP | | ENSG00000225377 | LncEditing_363695 | OV | chr20_335612_- | 9.428506e+00 | 6.610950e+00 | 1.952471e+00 | 4.016656e+00 | 5.902974e-05 | 6.901188e-05 | UP | | ENSG00000225377 | LncEditing_363733 | OV | chr20_336518_- | 8.524310e+00 | 6.784643e+00 | 3.036652e+00 | 2.234269e+00 | 2.546536e-02 | 2.585908e-02 | UP | | ENSG00000225377 | LncEditing_363735 | OV | chr20_336527_- | 8.179783e+00 | 6.784124e+00 | 3.705074e+00 | 2.132836e+00 | 3.293818e-02 | 3.324550e-02 | UP | | ENSG00000225377 | LncEditing_363749 | OV | chr20_336588_- | 7.709535e+00 | 6.598335e+00 | 4.453510e+00 | 2.837981e+00 | 4.539982e-03 | 4.770873e-03 | UP | | ENSG00000225377 | LncEditing_363756 | OV | chr20_336698_- | 8.580365e+00 | 6.255189e+00 | 2.193051e+00 | 5.024828e+00 | 5.038835e-07 | 6.719665e-07 | UP | | ENSG00000225377 | LncEditing_363765 | OV | chr20_336753_- | 8.772233e+00 | 6.453450e+00 | 2.257981e+00 | 4.542748e+00 | 5.552565e-06 | 6.908773e-06 | UP | | ENSG00000225377 | LncEditing_363773 | OV | chr20_336794_- | 8.438548e+00 | 6.561557e+00 | 2.755150e+00 | 3.298492e+00 | 9.720568e-04 | 1.062158e-03 | UP | | ENSG00000225377 | LncEditing_363774 | OV | chr20_336795_- | 8.537617e+00 | 6.599586e+00 | 2.692096e+00 | 3.183993e+00 | 1.452584e-03 | 1.567666e-03 | UP | | ENSG00000225377 | LncEditing_363775 | OV | chr20_336797_- | 8.109582e+00 | 6.574919e+00 | 3.304098e+00 | 3.756618e+00 | 1.722248e-04 | 1.946659e-04 | UP | | ENSG00000225377 | LncEditing_363777 | OV | chr20_336821_- | 8.360293e+00 | 6.756607e+00 | 3.254631e+00 | 2.435740e+00 | 1.486134e-02 | 1.525964e-02 | UP | | ENSG00000225377 | LncEditing_363797 | OV | chr20_336886_- | 8.402896e+00 | 6.438719e+00 | 2.603400e+00 | 4.374620e+00 | 1.216441e-05 | 1.477567e-05 | UP | | ENSG00000225377 | LncEditing_363805 | OV | chr20_336940_- | 8.836619e+00 | 6.677413e+00 | 2.473991e+00 | 3.554247e+00 | 3.790633e-04 | 4.222273e-04 | UP | | ENSG00000225377 | LncEditing_363858 | OV | chr20_338693_- | 8.393760e+00 | 6.746483e+00 | 3.172774e+00 | 3.178085e+00 | 1.482513e-03 | 1.599027e-03 | UP | | ENSG00000225377 | LncEditing_363875 | OV | chr20_339111_- | 8.753383e+00 | 6.534314e+00 | 2.370764e+00 | 3.899582e+00 | 9.635885e-05 | 1.108911e-04 | UP | | ENSG00000225377 | LncEditing_363876 | OV | chr20_339137_- | 8.202946e+00 | 6.712429e+00 | 3.456535e+00 | 2.007859e+00 | 4.465831e-02 | 4.475565e-02 | UP | | ENSG00000225377 | LncEditing_363886 | OV | chr20_339166_- | 8.233571e+00 | 6.475821e+00 | 2.886376e+00 | 3.837532e+00 | 1.242772e-04 | 1.416021e-04 | UP | | ENSG00000225377 | LncEditing_363889 | OV | chr20_339169_- | 8.812189e+00 | 6.614001e+00 | 2.415592e+00 | 3.989174e+00 | 6.630390e-05 | 7.717270e-05 | UP | | ENSG00000225377 | LncEditing_363894 | OV | chr20_339219_- | 8.060301e+00 | 6.576085e+00 | 3.405941e+00 | 3.853684e+00 | 1.163537e-04 | 1.331515e-04 | UP | | ENSG00000225377 | LncEditing_363900 | OV | chr20_339367_- | 8.172705e+00 | 6.650629e+00 | 3.363348e+00 | 2.237388e+00 | 2.526097e-02 | 2.566570e-02 | UP | | ENSG00000225377 | LncEditing_363904 | OV | chr20_339401_- | 8.198582e+00 | 6.324057e+00 | 2.670056e+00 | 4.634905e+00 | 3.571008e-06 | 4.501086e-06 | UP | | ENSG00000225377 | LncEditing_363906 | OV | chr20_339432_- | 9.054151e+00 | 6.452543e+00 | 2.046197e+00 | 4.716178e+00 | 2.403160e-06 | 3.064779e-06 | UP | | ENSG00000225377 | LncEditing_363907 | OV | chr20_339446_- | 9.320495e+00 | 6.576775e+00 | 1.987967e+00 | 3.975201e+00 | 7.031977e-05 | 8.164019e-05 | UP | | ENSG00000225377 | LncEditing_363911 | OV | chr20_339476_- | 8.895206e+00 | 6.695188e+00 | 2.439598e+00 | 3.257685e+00 | 1.123250e-03 | 1.222282e-03 | UP | | ENSG00000225377 | LncEditing_363912 | OV | chr20_339481_- | 9.778371e+00 | 6.598603e+00 | 1.762321e+00 | 4.466562e+00 | 7.948651e-06 | 9.784183e-06 | UP | | ENSG00000225377 | LncEditing_363932 | OV | chr20_340052_- | 9.611842e+00 | 6.584283e+00 | 1.832218e+00 | 4.941293e+00 | 7.760617e-07 | 1.024535e-06 | UP | | ENSG00000225377 | LncEditing_363944 | OV | chr20_340148_- | 8.896210e+00 | 6.568461e+00 | 2.285006e+00 | 4.316990e+00 | 1.581715e-05 | 1.911152e-05 | UP | | ENSG00000225377 | LncEditing_363949 | OV | chr20_340321_- | 7.973793e+00 | 6.285295e+00 | 2.913025e+00 | 4.200090e+00 | 2.668092e-05 | 3.194414e-05 | UP | | ENSG00000225377 | LncEditing_363953 | OV | chr20_340344_- | 8.581372e+00 | 6.745297e+00 | 2.879137e+00 | 2.573046e+00 | 1.008077e-02 | 1.042662e-02 | UP | | ENSG00000225377 | LncEditing_363957 | OV | chr20_340379_- | 8.445872e+00 | 6.678917e+00 | 2.953055e+00 | 2.757345e+00 | 5.827275e-03 | 6.082096e-03 | UP | | ENSG00000225377 | LncEditing_363959 | OV | chr20_340389_- | 8.155469e+00 | 6.762346e+00 | 3.700360e+00 | 2.642252e+00 | 8.235677e-03 | 8.542251e-03 | UP | | ENSG00000225377 | LncEditing_363978 | OV | chr20_340478_- | 8.549262e+00 | 6.634393e+00 | 2.733469e+00 | 2.870600e+00 | 4.096930e-03 | 4.317624e-03 | UP | | ENSG00000225377 | LncEditing_363984 | OV | chr20_340530_- | 8.278436e+00 | 6.451620e+00 | 2.780120e+00 | 4.205391e+00 | 2.606308e-05 | 3.124511e-05 | UP | | ENSG00000225377 | LncEditing_363562 | STAD | chr20_332060_- | 7.916242e+00 | 4.623229e+00 | 1.288801e+00 | 6.894990e+00 | 5.386841e-12 | 9.967050e-12 | UP | | ENSG00000225377 | LncEditing_363625 | STAD | chr20_334794_- | 7.167559e+00 | 4.524867e+00 | 1.506917e+00 | 6.157532e+00 | 7.388741e-10 | 1.152579e-09 | UP | | ENSG00000225377 | LncEditing_363628 | STAD | chr20_334807_- | 7.003535e+00 | 4.231006e+00 | 1.375360e+00 | 7.716594e+00 | 1.194794e-14 | 2.791100e-14 | UP | | ENSG00000225377 | LncEditing_363630 | STAD | chr20_334820_- | 7.365749e+00 | 4.730208e+00 | 1.565120e+00 | 5.361685e+00 | 8.244903e-08 | 1.105496e-07 | UP | | ENSG00000225377 | LncEditing_363632 | STAD | chr20_334827_- | 7.616990e+00 | 4.324869e+00 | 1.224643e+00 | 7.844913e+00 | 4.332545e-15 | 1.073392e-14 | UP | | ENSG00000225377 | LncEditing_363634 | STAD | chr20_334837_- | 7.601886e+00 | 4.396217e+00 | 1.265671e+00 | 7.650966e+00 | 1.994749e-14 | 4.548537e-14 | UP | | ENSG00000225377 | LncEditing_363647 | STAD | chr20_335002_- | 7.210380e+00 | 4.828188e+00 | 1.728330e+00 | 4.479109e+00 | 7.495519e-06 | 8.982078e-06 | UP | | ENSG00000225377 | LncEditing_363735 | STAD | chr20_336527_- | 7.519375e+00 | 4.765523e+00 | 1.519807e+00 | 4.714827e+00 | 2.419157e-06 | 2.986407e-06 | UP | | ENSG00000225377 | LncEditing_363749 | STAD | chr20_336588_- | 6.733755e+00 | 4.561510e+00 | 1.779677e+00 | 5.621879e+00 | 1.888913e-08 | 2.638949e-08 | UP | | ENSG00000225377 | LncEditing_363756 | STAD | chr20_336698_- | 7.228704e+00 | 4.341929e+00 | 1.359802e+00 | 7.433611e+00 | 1.056721e-13 | 2.278952e-13 | UP | | ENSG00000225377 | LncEditing_363765 | STAD | chr20_336753_- | 6.915963e+00 | 4.726680e+00 | 1.821152e+00 | 5.039892e+00 | 4.657944e-07 | 5.939605e-07 | UP | | ENSG00000225377 | LncEditing_363773 | STAD | chr20_336794_- | 6.982695e+00 | 4.615128e+00 | 1.673883e+00 | 5.919184e+00 | 3.235431e-09 | 4.796208e-09 | UP | | ENSG00000225377 | LncEditing_363774 | STAD | chr20_336795_- | 7.199743e+00 | 4.725796e+00 | 1.646394e+00 | 5.794443e+00 | 6.854820e-09 | 9.865430e-09 | UP | | ENSG00000225377 | LncEditing_363775 | STAD | chr20_336797_- | 6.974917e+00 | 4.593256e+00 | 1.659314e+00 | 5.909771e+00 | 3.425837e-09 | 5.067974e-09 | UP | | ENSG00000225377 | LncEditing_363797 | STAD | chr20_336886_- | 6.941038e+00 | 4.578287e+00 | 1.665713e+00 | 6.058028e+00 | 1.378006e-09 | 2.097029e-09 | UP | | ENSG00000225377 | LncEditing_363858 | STAD | chr20_338693_- | 7.485329e+00 | 4.802470e+00 | 1.561794e+00 | 4.927688e+00 | 8.320826e-07 | 1.043382e-06 | UP | | ENSG00000225377 | LncEditing_363872 | STAD | chr20_339075_- | 7.635572e+00 | 4.784530e+00 | 1.482890e+00 | 4.723975e+00 | 2.312784e-06 | 2.857555e-06 | UP | | ENSG00000225377 | LncEditing_363875 | STAD | chr20_339111_- | 7.255520e+00 | 4.675903e+00 | 1.577700e+00 | 6.124396e+00 | 9.102846e-10 | 1.406179e-09 | UP | | ENSG00000225377 | LncEditing_363876 | STAD | chr20_339137_- | 7.498242e+00 | 4.776554e+00 | 1.537085e+00 | 5.911941e+00 | 3.380995e-09 | 5.006810e-09 | UP | | ENSG00000225377 | LncEditing_363886 | STAD | chr20_339166_- | 7.603185e+00 | 4.470448e+00 | 1.305169e+00 | 7.826048e+00 | 5.034450e-15 | 1.232365e-14 | UP | | ENSG00000225377 | LncEditing_363889 | STAD | chr20_339169_- | 8.052285e+00 | 4.622142e+00 | 1.248694e+00 | 6.820931e+00 | 9.045233e-12 | 1.641670e-11 | UP | | ENSG00000225377 | LncEditing_363894 | STAD | chr20_339219_- | 7.670668e+00 | 4.606554e+00 | 1.359316e+00 | 6.560115e+00 | 5.376613e-11 | 9.122405e-11 | UP | | ENSG00000225377 | LncEditing_363900 | STAD | chr20_339367_- | 7.357953e+00 | 4.540099e+00 | 1.435584e+00 | 6.544114e+00 | 5.984912e-11 | 1.013049e-10 | UP | | ENSG00000225377 | LncEditing_363904 | STAD | chr20_339401_- | 7.366810e+00 | 4.460983e+00 | 1.381829e+00 | 6.891542e+00 | 5.519081e-12 | 1.019784e-11 | UP | | ENSG00000225377 | LncEditing_363906 | STAD | chr20_339432_- | 8.253843e+00 | 4.646090e+00 | 1.206202e+00 | 6.380870e+00 | 1.760849e-10 | 2.894989e-10 | UP | | ENSG00000225377 | LncEditing_363911 | STAD | chr20_339476_- | 7.911860e+00 | 4.742079e+00 | 1.354101e+00 | 6.062216e+00 | 1.342585e-09 | 2.045300e-09 | UP | | ENSG00000225377 | LncEditing_363912 | STAD | chr20_339481_- | 7.912312e+00 | 4.684030e+00 | 1.322141e+00 | 6.056055e+00 | 1.395007e-09 | 2.120648e-09 | UP | | ENSG00000225377 | LncEditing_363949 | STAD | chr20_340321_- | 6.215528e+00 | 4.462073e+00 | 2.091338e+00 | 5.252893e+00 | 1.497282e-07 | 1.961672e-07 | UP | | ENSG00000225377 | LncEditing_363953 | STAD | chr20_340344_- | 6.078362e+00 | 4.907557e+00 | 3.239627e+00 | 3.337246e+00 | 8.461292e-04 | 9.144582e-04 | UP | | ENSG00000225377 | LncEditing_363957 | STAD | chr20_340379_- | 6.449834e+00 | 4.864594e+00 | 2.457349e+00 | 4.255694e+00 | 2.084013e-05 | 2.456220e-05 | UP | | ENSG00000225377 | LncEditing_363959 | STAD | chr20_340389_- | 6.236287e+00 | 4.928180e+00 | 2.944361e+00 | 2.920330e+00 | 3.496611e-03 | 3.681726e-03 | UP | | ENSG00000225377 | LncEditing_363978 | STAD | chr20_340478_- | 6.777852e+00 | 4.754037e+00 | 1.954366e+00 | 4.783409e+00 | 1.723469e-06 | 2.142368e-06 | UP | | ENSG00000225377 | LncEditing_363984 | STAD | chr20_340530_- | 6.938407e+00 | 4.469859e+00 | 1.576354e+00 | 6.173148e+00 | 6.694335e-10 | 1.049977e-09 | UP | | ENSG00000225377 | LncEditing_363562 | ESCA | chr20_332060_- | 7.033501e+00 | 3.362391e+00 | 9.391830e-01 | 5.894084e+00 | 3.767646e-09 | 8.853123e-09 | UP | | ENSG00000225377 | LncEditing_363574 | ESCA | chr20_332845_- | 6.741793e+00 | 3.584447e+00 | 1.097235e+00 | 4.261506e+00 | 2.030539e-05 | 2.744042e-05 | UP | | ENSG00000225377 | LncEditing_363591 | ESCA | chr20_332983_- | 6.880867e+00 | 3.418565e+00 | 9.908842e-01 | 5.438974e+00 | 5.358840e-08 | 1.039050e-07 | UP | | ENSG00000225377 | LncEditing_363604 | ESCA | chr20_333457_- | 8.001509e+00 | 3.532899e+00 | 8.478746e-01 | 5.058074e+00 | 4.235117e-07 | 7.164492e-07 | UP | | ENSG00000225377 | LncEditing_363608 | ESCA | chr20_333502_- | 7.218718e+00 | 3.491023e+00 | 9.541142e-01 | 5.088510e+00 | 3.608879e-07 | 6.200172e-07 | UP | | ENSG00000225377 | LncEditing_363625 | ESCA | chr20_334794_- | 5.576986e+00 | 3.080405e+00 | 1.167726e+00 | 6.036843e+00 | 1.571583e-09 | 4.002477e-09 | UP | | ENSG00000225377 | LncEditing_363628 | ESCA | chr20_334807_- | 5.247825e+00 | 2.876327e+00 | 1.152749e+00 | 6.427396e+00 | 1.298087e-10 | 4.110840e-10 | UP | | ENSG00000225377 | LncEditing_363630 | ESCA | chr20_334820_- | 6.377913e+00 | 3.287480e+00 | 1.045913e+00 | 5.712636e+00 | 1.112397e-08 | 2.376741e-08 | UP | | ENSG00000225377 | LncEditing_363631 | ESCA | chr20_334821_- | 6.246986e+00 | 3.672270e+00 | 1.304652e+00 | 3.146649e+00 | 1.651531e-03 | 1.852118e-03 | UP | | ENSG00000225377 | LncEditing_363632 | ESCA | chr20_334827_- | 5.484377e+00 | 2.962297e+00 | 1.125351e+00 | 6.360882e+00 | 2.005990e-10 | 6.087468e-10 | UP | | ENSG00000225377 | LncEditing_363634 | ESCA | chr20_334837_- | 5.305913e+00 | 3.148608e+00 | 1.328221e+00 | 5.310111e+00 | 1.095584e-07 | 2.017877e-07 | UP | | ENSG00000225377 | LncEditing_363643 | ESCA | chr20_334978_- | 7.219651e+00 | 3.543035e+00 | 9.737635e-01 | 4.822780e+00 | 1.415713e-06 | 2.232757e-06 | UP | | ENSG00000225377 | LncEditing_363647 | ESCA | chr20_335002_- | 7.134819e+00 | 3.424578e+00 | 9.443308e-01 | 5.289864e+00 | 1.224073e-07 | 2.242707e-07 | UP | | ENSG00000225377 | LncEditing_363666 | ESCA | chr20_335073_- | 6.372025e+00 | 3.597449e+00 | 1.212448e+00 | 3.803654e+00 | 1.425770e-04 | 1.755825e-04 | UP | | ENSG00000225377 | LncEditing_363673 | ESCA | chr20_335126_- | 6.668223e+00 | 3.505725e+00 | 1.078063e+00 | 4.714674e+00 | 2.420982e-06 | 3.706631e-06 | UP | | ENSG00000225377 | LncEditing_363678 | ESCA | chr20_335537_- | 6.208992e+00 | 3.677318e+00 | 1.323267e+00 | 2.928023e+00 | 3.411245e-03 | 3.733665e-03 | UP | | ENSG00000225377 | LncEditing_363695 | ESCA | chr20_335612_- | 5.594170e+00 | 3.590901e+00 | 1.563531e+00 | 4.149179e+00 | 3.336698e-05 | 4.406881e-05 | UP | | ENSG00000225377 | LncEditing_363733 | ESCA | chr20_336518_- | 5.809518e+00 | 3.730395e+00 | 1.564725e+00 | 3.552668e+00 | 3.813450e-04 | 4.523482e-04 | UP | | ENSG00000225377 | LncEditing_363735 | ESCA | chr20_336527_- | 6.031755e+00 | 3.580895e+00 | 1.329332e+00 | 3.495179e+00 | 4.737434e-04 | 5.578461e-04 | UP | | ENSG00000225377 | LncEditing_363736 | ESCA | chr20_336528_- | 6.165168e+00 | 3.717376e+00 | 1.370134e+00 | 3.237999e+00 | 1.203712e-03 | 1.362301e-03 | UP | | ENSG00000225377 | LncEditing_363749 | ESCA | chr20_336588_- | 5.591936e+00 | 3.119613e+00 | 1.187676e+00 | 6.370719e+00 | 1.881442e-10 | 5.782262e-10 | UP | | ENSG00000225377 | LncEditing_363756 | ESCA | chr20_336698_- | 5.328106e+00 | 3.297312e+00 | 1.444393e+00 | 5.066495e+00 | 4.052081e-07 | 6.893801e-07 | UP | | ENSG00000225377 | LncEditing_363765 | ESCA | chr20_336753_- | 5.385830e+00 | 3.362139e+00 | 1.471044e+00 | 4.282650e+00 | 1.846806e-05 | 2.510314e-05 | UP | | ENSG00000225377 | LncEditing_363772 | ESCA | chr20_336789_- | 5.140120e+00 | 3.781328e+00 | 2.257801e+00 | 2.584111e+00 | 9.763029e-03 | 1.029860e-02 | UP | | ENSG00000225377 | LncEditing_363773 | ESCA | chr20_336794_- | 5.426093e+00 | 3.248318e+00 | 1.350948e+00 | 5.276118e+00 | 1.319490e-07 | 2.409104e-07 | UP | | ENSG00000225377 | LncEditing_363774 | ESCA | chr20_336795_- | 5.556865e+00 | 3.455351e+00 | 1.458919e+00 | 4.295780e+00 | 1.740801e-05 | 2.377016e-05 | UP | | ENSG00000225377 | LncEditing_363775 | ESCA | chr20_336797_- | 5.467020e+00 | 3.141733e+00 | 1.251260e+00 | 5.851685e+00 | 4.866166e-09 | 1.114698e-08 | UP | | ENSG00000225377 | LncEditing_363777 | ESCA | chr20_336821_- | 6.713317e+00 | 3.543817e+00 | 1.084926e+00 | 4.116552e+00 | 3.845834e-05 | 5.047507e-05 | UP | | ENSG00000225377 | LncEditing_363797 | ESCA | chr20_336886_- | 5.824207e+00 | 3.172046e+00 | 1.140709e+00 | 6.021964e+00 | 1.723135e-09 | 4.346198e-09 | UP | | ENSG00000225377 | LncEditing_363805 | ESCA | chr20_336940_- | 7.416990e+00 | 3.461493e+00 | 9.095547e-01 | 5.103469e+00 | 3.334835e-07 | 5.744360e-07 | UP | | ENSG00000225377 | LncEditing_363858 | ESCA | chr20_338693_- | 6.315359e+00 | 3.625566e+00 | 1.248972e+00 | 3.662431e+00 | 2.498333e-04 | 3.018160e-04 | UP | | ENSG00000225377 | LncEditing_363872 | ESCA | chr20_339075_- | 5.680165e+00 | 3.662943e+00 | 1.579955e+00 | 3.567592e+00 | 3.602772e-04 | 4.280844e-04 | UP | | ENSG00000225377 | LncEditing_363875 | ESCA | chr20_339111_- | 5.991520e+00 | 3.438404e+00 | 1.248154e+00 | 4.779236e+00 | 1.759623e-06 | 2.748263e-06 | UP | | ENSG00000225377 | LncEditing_363876 | ESCA | chr20_339137_- | 5.806686e+00 | 3.523180e+00 | 1.387276e+00 | 4.160509e+00 | 3.175394e-05 | 4.204438e-05 | UP | | ENSG00000225377 | LncEditing_363886 | ESCA | chr20_339166_- | 5.579257e+00 | 3.356930e+00 | 1.364386e+00 | 5.050010e+00 | 4.417874e-07 | 7.455607e-07 | UP | | ENSG00000225377 | LncEditing_363889 | ESCA | chr20_339169_- | 6.108696e+00 | 3.489140e+00 | 1.237635e+00 | 4.311707e+00 | 1.619991e-05 | 2.222187e-05 | UP | | ENSG00000225377 | LncEditing_363894 | ESCA | chr20_339219_- | 6.283492e+00 | 3.427779e+00 | 1.143782e+00 | 4.953894e+00 | 7.274283e-07 | 1.187453e-06 | UP | | ENSG00000225377 | LncEditing_363900 | ESCA | chr20_339367_- | 6.721869e+00 | 3.375137e+00 | 1.006121e+00 | 5.729811e+00 | 1.005426e-08 | 2.174791e-08 | UP | | ENSG00000225377 | LncEditing_363904 | ESCA | chr20_339401_- | 5.980085e+00 | 3.359550e+00 | 1.202070e+00 | 5.205710e+00 | 1.932565e-07 | 3.444435e-07 | UP | | ENSG00000225377 | LncEditing_363906 | ESCA | chr20_339432_- | 8.016922e+00 | 3.531210e+00 | 8.453900e-01 | 5.164737e+00 | 2.407770e-07 | 4.248051e-07 | UP | | ENSG00000225377 | LncEditing_363907 | ESCA | chr20_339446_- | 7.527404e+00 | 3.530098e+00 | 9.153786e-01 | 4.684553e+00 | 2.805710e-06 | 4.264516e-06 | UP | | ENSG00000225377 | LncEditing_363911 | ESCA | chr20_339476_- | 6.988939e+00 | 3.549638e+00 | 1.023121e+00 | 4.337877e+00 | 1.438655e-05 | 1.987753e-05 | UP | | ENSG00000225377 | LncEditing_363912 | ESCA | chr20_339481_- | 7.165004e+00 | 3.524840e+00 | 9.771257e-01 | 4.760464e+00 | 1.931486e-06 | 3.012199e-06 | UP | | ENSG00000225377 | LncEditing_363944 | ESCA | chr20_340148_- | 6.867296e+00 | 3.612611e+00 | 1.079098e+00 | 3.831847e+00 | 1.271846e-04 | 1.575525e-04 | UP | | ENSG00000225377 | LncEditing_363949 | ESCA | chr20_340321_- | 4.842326e+00 | 3.262220e+00 | 1.754859e+00 | 3.765099e+00 | 1.664832e-04 | 2.040637e-04 | UP | | ENSG00000225377 | LncEditing_363953 | ESCA | chr20_340344_- | 4.968986e+00 | 3.766386e+00 | 2.501435e+00 | 2.201516e+00 | 2.769953e-02 | 2.821099e-02 | UP | | ENSG00000225377 | LncEditing_363957 | ESCA | chr20_340379_- | 5.901094e+00 | 3.499941e+00 | 1.326873e+00 | 4.206783e+00 | 2.590311e-05 | 3.462559e-05 | UP | | ENSG00000225377 | LncEditing_363959 | ESCA | chr20_340389_- | 5.956266e+00 | 3.523783e+00 | 1.320510e+00 | 4.458305e+00 | 8.261034e-06 | 1.175501e-05 | UP | | ENSG00000225377 | LncEditing_363978 | ESCA | chr20_340478_- | 5.539102e+00 | 3.334692e+00 | 1.365936e+00 | 5.113350e+00 | 3.164955e-07 | 5.477907e-07 | UP | | ENSG00000225377 | LncEditing_363984 | ESCA | chr20_340530_- | 5.517087e+00 | 3.202821e+00 | 1.274594e+00 | 5.332965e+00 | 9.662180e-08 | 1.793578e-07 | UP | | ENSG00000225377 | LncEditing_364043 | ESCA | chr20_344868_- | 7.794615e+00 | 3.526337e+00 | 8.738912e-01 | 4.910282e+00 | 9.094548e-07 | 1.469713e-06 | UP |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value | | ENSG00000225377 | LncEditing_363733 | -3.560680e-01 | 2.413094e-02 | 2.579514e-02 | | ENSG00000225377 | LncEditing_363777 | -3.841877e-01 | 5.878378e-03 | 7.972550e-03 | | ENSG00000225377 | LncEditing_363858 | -3.002832e-01 | 3.227663e-02 | 3.272911e-02 | | ENSG00000225377 | LncEditing_363735 | -3.936685e-01 | 8.197419e-03 | 1.011779e-02 | | ENSG00000225377 | LncEditing_363797 | -3.303687e-01 | 2.593923e-03 | 4.162068e-03 | | ENSG00000225377 | LncEditing_363872 | -4.201519e-01 | 6.950701e-03 | 8.857753e-03 | | ENSG00000225377 | LncEditing_363875 | -3.324714e-01 | 9.447361e-03 | 1.115357e-02 | | ENSG00000225377 | LncEditing_363876 | -4.332914e-01 | 3.703259e-03 | 5.335715e-03 | | ENSG00000225377 | LncEditing_363912 | -3.703799e-01 | 1.038680e-02 | 1.210079e-02 | | ENSG00000225377 | LncEditing_363978 | -3.280789e-01 | 9.235582e-03 | 1.108898e-02 | | ENSG00000225377 | LncEditing_363666 | -4.702481e-01 | 2.720830e-02 | 3.509599e-02 | | ENSG00000225377 | LncEditing_363695 | -3.757313e-01 | 3.724844e-02 | 4.143461e-02 | | ENSG00000225377 | LncEditing_363735 | -5.050927e-01 | 8.492142e-03 | 1.801401e-02 | | ENSG00000225377 | LncEditing_363777 | -4.604932e-01 | 3.103116e-02 | 3.742575e-02 | | ENSG00000225377 | LncEditing_363912 | 5.595064e-01 | 1.031538e-02 | 2.009555e-02 | | ENSG00000225377 | LncEditing_363959 | -6.075893e-01 | 3.694995e-04 | 3.982384e-03 |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000225377 | ENST00000414676 | FTL | ENSG00000087086 | ENST00000331825 | -0.1139 | 75 | - | CHOL | | ENSG00000225377 | ENST00000442637 | FTL | ENSG00000087086 | ENST00000331825 | -0.2691 | 1 | - | CHOL |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | | ENSG00000225377 | NRSN2-AS1,hsa-mir-1228,ARPP19 | CHOL,DLBC,UCS,SARC,KIRP | | ENSG00000225377 | NRSN2-AS1,hsa-mir-1228,THAP6 | CHOL,DLBC,UCS,SARC,KIRP | | ENSG00000225377 | NRSN2-AS1,hsa-mir-511,C20orf96 | PCPG,CHOL,THCA,SARC,KIRP | | ENSG00000225377 | NRSN2-AS1,hsa-mir-511,SH2B1 | PCPG,CHOL,THCA,SARC,KIRP | | ENSG00000225377 | NRSN2-AS1,hsa-mir-511,TSC2 | PCPG,CHOL,THCA,SARC,KIRP | | ENSG00000225377 | NRSN2-AS1,hsa-mir-511,GAS8 | PCPG,CHOL,THCA,SARC,KIRP |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000225377.4 | ENST00000414676.4 | 136 | 807 | 1217 | | ENSG00000225377.4 | ENST00000442637.1 | 77 | 285 | 518 |
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