 lncRNA targets the enhancer region and positively regulates the gene expression. |
| Only predicted by TDF | | EEF1AKMT3,RPAP2,CCDC65,PMM2,VAMP1,MTMR6,MFSD8,ATL2,RUNX2,WDFY1,ELOVL5,LIG3,MZF1,TTC31,MAPK8IP3,SRP19,VAMP4,FKRP,FKBP7,SLF2,TDP2,TMEM184C,HLTF,PIGG,SENP1,GPATCH11,RNF6,TULP3,WDR5B,ST7L,MSANTD2,COG6,LYRM2,TRIM5,C9orf85,FAM133B,TERF2IP,UBE2N,IBTK,TBK1,TTC14,BRPF1,RAB10,SH3GLB1,AFAP1,PPIP5K2,DNTTIP2,SRSF4,SPTY2D1,FAM220A,TAF9,C20orf194,ZFP1,CBX3,NCBP1,PPIL4,AP3M2,SMC2,PSIP1,RIC8B,UBE3A,TMEM30A,THOC2,ZBTB6,GTF3C2,OFD1,PEAK1,SEPTIN10,ARHGAP11A,FCHSD1,HELLS,CC2D1B,PURA,CD164,ANO8,LMAN2L,ZNHIT6,INO80E,HERPUD2,SEC63,NEMP1,MIS18BP1,MDN1,PAIP1,ANAPC5,RAB5A,SEC23A,SRPK1,COQ6,KCTD2,DONSON,MBD4,CMPK2,SECISBP2L,SSBP2,NFKBIZ,CPOX,MCM3,PHC3,CDK11A,BTF3L4,AIDA,ZZEF1,DHX35,INTS2,SUPT20H,DCUN1D2,UBXN2A,EIF2B1,SLU7,PRELID3B,ERGIC2,BUB3,RIOK1,SMARCAD1,STX6,GTSE1,KHNYN,ZNF14,MBTPS1,RBFA,CDK17,IPO9,ATG2B,CIR1,USP38,ARHGAP33,DMAC2L,ECD,B3GALNT1,AP4E1,DDX42,DENR,TIFA,EIF4A1,MKRN2,TIAM1,CDK7,FAM204A,DNAJC24,GCA,RCHY1,SELENOI,SWT1,BRD3,TMEM64,RWDD4,ARHGEF9,ZNF30,AMMECR1L,TMEM168,IPO8,ARHGEF2,FANCL,STK17B,GNE,BRAP,KLF7,KIF18A,WBP4,UBE2G2,MIB1,CEP68,IP6K2,NEMP2,KLHL15,VEZF1,MLLT6,PRPF40A,GSK3B,ROBO1,ZNF70,FASTKD1,INO80D,ICE2,AGK,CRLF3,TCAIM,KPNA1,CIP2A,AP1G2,ZXDA,BANP,DNAJC21,ZNF25,CCDC59,TRNT1,AIMP1,CHD8,EPN2,AGA,KIAA1143,DENND6A,RALGPS2,GPM6B,UBR4,TMED8,IFT74,OSBPL8,MZT1,CBLB,XPO4,AP1AR,UFL1,PKD1,RIMKLB,TAF8,LCP2,METAP1D,SLC25A46,PSMD14,UTP14C,RFWD3,CEP83,DDX20,RFC4,LIN54,LRIG2,FBXO8,PARP2,SEC23IP,IKBKB,SART3,DGKE,SRBD1,ANKRD49,PAXBP1,CCDC125,TMOD2,KCTD18,PLEKHA8,RSRP1,CPNE8,EYA3,GOLGA4,FLCN,NVL,ATG14,GOLGB1,PWWP2A,DNAJC18,MOB4,MYNN,RPE,ANKLE2,SLC39A10,HDAC2,LINS1,ZFR,TMEM199,SCAF11,DDX11,PUS10,TMEM167A,CNOT7,DIABLO,NDUFAF7,TOR1AIP2,TXNDC9,ZNF862,PDS5B,EDEM3,CRMP1,SEC24A,DCTN4,SNX6,CNPY4,CENPL,KIF3A,OAS3,TYW1,SCAMP1,TIMM23B,SRR,CCNA2,MTRF1L,KHDC4,NADK2,MIDEAS,EPB41L2,UNC119B,PIK3CA,PSMD12,LMLN,ATAD2B,NISCH,DUT,MYO1B,PREPL,PXDN,ESCO1,MTMR10,PBX2,KLF12,ANGEL2,ATPSCKMT,ATXN7L2,NAA15,POC5,RIT1,MYSM1,ITPRID2,METTL15,DARS1,DTD2,UIMC1,ELF1,TJAP1,C12orf29,UVRAG,SMARCE1,TNS1,TAF1D,MKS1,C9orf64,CEP95,TTI1,DHFR,DDX52,TASP1,IFT88,COX11,CRY1,MEF2C,SUGT1,GTF3C3,AFTPH,XPC,MYCBP,PRR14L,FYTTD1,PRDX3,BARD1,RPS6KB1,SH3BGRL,N6AMT1,KANSL3,DSCC1,RGL1,DENND4A,DDX60,MPHOSPH9,NUP37,INTS7,SP100,AGO2,ARL13B,RBM26,XRCC2,CAMK2G,CCNH,CEBPZOS,SYNE1,MLH3,CADM1,KANSL1L,ANKRD46,WDFY3,ATP8A1,ENTPD4,SMC5,GNA12,HEATR5B,ZNF106,PABIR2,FBXL20,CENPC,NOL9,HERC2,TDG,ABHD13,C2orf49,POLK,RAD51C,PLEKHA3,NUP88,PSPC1,PRKAA1,PRDM2,WRN,RBL1,SPATA5,R3HDM2,BAZ1B,USP12,KIF7,METTL6,AAK1,TIA1,MOSMO,BAG4,SAAL1,SP110,SPCS3,SASH1,ZNF8,BMPR2,SNRNP200,CDK2,PARP1,ERCC3,SAYSD1,FAM13B,DTX3,ST8SIA4,UBA7,BRCA1,ARFGEF1,MTMR9,LUC7L,SPOPL,PTBP3,DSE,BRD8,ERCC8,TMCC1,UBE2V1,USP16,MAPKAPK5,BROX,ENTPD7,RBM33,PAG1,NOL8,ADAL,BUB1,TMEM237,COL4A5,FPGT,DSTYK,MPHOSPH10,SLC25A27,SCFD1,POLR1B,EXOC5,RFX5,ZNF2,GXYLT1,LNPK,POLR1F,POLE3,KCTD6,TTLL7,MAP3K2,RPRD1A,GPATCH2,MUTYH,TOR1AIP1,NHLRC2,CAAP1,RUFY3,CKAP2,TTC28,ZFYVE26,ANKRD42,LARP7,ZC3HC1,KMT2E,CWC22,C2orf42,DCAF16,ACVR2B,PAQR3,MORC3,ITPR2,DLG4,PEX1,CHORDC1,S100PBP,AGPAT5,KAT6B,SUPT16H,PANK2,RNF216,TRIM23,DTWD1,SLC25A30,PCNT,N4BP1,YEATS2,TAF1C,RBM14,RB1,IKZF4,TEFM,TCEANC2,NF1,CGAS,C2orf69,SPIN4,ANKRD50,THAP9,MPV17,THAP6,KIF14,DYNC1LI1,FBXL5,DHX15,SEC62,GNB5,GGPS1,KIF20B,SENP7,AQR,CHFR,MTRF1,C8orf88,TAF2,TRPM7,GTF2E1,MCM8,ACLY,TRAPPC8,KCTD20,FAM216A,ARSK,MKLN1,WDR41,GAB3,PHIP,TMED7,GPS2,LRRC58,DUS4L,PPP1R21,CRIM1,CCDC93,LMBR1,MBD6,SNX1,ELL2,TM2D1,TCEA1,RNF130,FAM98A,ATAD1,HP1BP3,VPS13C,TAPT1,NLRC3,CBR4,ITPR1,USO1,DIDO1,LTBP1,FKTN,ALG9,CEP41,SLC36A4,DUSP28,CLIP3,PUM2,MARCHF5,DHX36,TTC9C,ZCCHC7,IMPA1,TTLL3,TUBE1,RCSD1,COPS8,NEDD1,TFB1M,ARMC1,ARHGEF6,SPG11,WASL,FBXO42,PDCD7,NCAPD3,ITFG1,PIP5K1A,STK38,FRMD4B,ELMO2,KRCC1,MGAT4A,PUM1,NUP155,CENPK,RB1CC1,CILK1,FASTKD3,DYNC2LI1,MCEE,CAPZA1,CNOT9,DCP1A,GXYLT2,BCS1L,TANK,DMTF1,MKNK1,RFC1,FAM193A,NSD3,DCK,CD69,MAK16,LMBR1L,MORF4L2,PTPRS,VPS39,STAT2,GMFB,WWC2,CENATAC,MMADHC,KAT6A,SNAPC1,AFF4,LZTFL1,ARAP2,RNF38,KPNB1,PARG,ZBED5,PNO1,HBS1L,INPP5B,SETD2,IK,SIN3A,CREB1,MEX3C,SLC2A11,SUDS3,ADSS2,SPG7,DPY19L4,CAPN7,ADAM10,KIF16B,USP49,SMAD2,DNAJC2,IGIP,OGFOD1,VPS35L,CLK2,MYEF2,RNF19A,RAPGEF6,ASH1L,POLG2,NFIA,PTAR1,CEP152,CIT,IFT81,KATNAL1,CPSF7,FLI1,TRIM37,PARP4,CTC1,GABPB1,NASP,ARMC10,RPAIN,VPS36,ACYP1,INTS6,FBXO38,TBCCD1,IFT172,HCFC2,PRKACB,SLC4A1AP,MEX3B,SKP2,RSRC2,NAPB,USP46,ZWINT,C3orf62,EIF2A,NAA25,PRMT9,SLC30A4,GTDC1,DOCK10,ZBED8,CHD9,TOPBP1,LMAN1,BACH1,PIGN,IQCG,AGER,AGO3,HPS5,FGD1,C19orf12,PRPF38A,UBE2E1,SBNO1,C1orf52,POGLUT1,TYW3,ABHD16A,TOP1,ARHGEF40,CHST10,NXF1,RNF111,C6orf62,PAN2,SLFN13,LAMP3,STAG2,PDK1,PKN2,CHEK1,CENPH,SLC30A6,NRDE2,METTL4,DCLRE1A,GRK3,MTMR4,KLHL17,N4BP2L1,ATXN2L,SDE2,ANKRD13C,TTC3,ORC6,TDRP,STXBP5,ATF7IP,SHOC2,METTL18,NARS2,MOSPD2,ATG4C,CASTOR3,SKA2,RAB28,PDCD10,DENND5A,COPB1,DPY19L3,MED7,CKAP2L,DCLRE1B,LCORL,CSNK1G1,CEP57,HOOK3,LRRC8C,METAP1,ARIH2,SAMD9,AZI2,HAUS2,AMD1,IFTAP,MORF4L1,RTL6,BZW1,EIF2AK3,SAMD8,SPATA5L1,EIF4G2,DDX55,SHQ1,ATL1,RASSF2,GLMN,LARP6,METTL21A,WDR59,UBA6,ACAP2,ADD1,TNKS2,LANCL1,ODR4,PPP3CB,NDC1,OXR1,OPA1,NAP1L2,ARL6IP1,DENND11,LYSMD3,LTO1,ATP7A,APBB2,FNBP1,DZIP1L,MSH3,NEK9,HMGB1,EP400,UACA,ANKDD1A,GLT8D1,DDX6,SESTD1,EVC,SLX4,NBPF11,AASS,ACIN1,THAP1,TTC8,USP6NL,PLOD2,GTF2A1,CEP85,PITPNB,BOD1L1,PHF11,RAB33B,CHD2,ST3GAL5,MINDY3,PEX13,CIAO2A,NBPF15,CHRAC1,METTL14,VPS4B,OTUD4,UPF3B,TMPO,HERC1,TRIM22,POLR1A,FRS3,GDAP2,RAD50,PIGK,CCDC82,LPP,LRBA,ELP1,ANP32E,UCKL1,FKBP3,SYNGAP1,XAF1,CHD1,NAP1L4,FANCC,FBXO30,HECTD4,YY1AP1,GNPTAB,EP400P1,CDC37L1,ARHGEF25,XPO5,USP45,CARD8,GOPC,NCOA2,OSGIN2,CENPU,LRIF1,MED17,STMN1,DNMT1,CHN1,HECTD2,PLCG1,RCBTB1,NCAPG,PRKAB2,RALGAPA1,TMX3,ZBTB4,UBE2B,MDM1,CHTF18,MED13L,FCHO2,POLH,FBXO41,SMG6,ASPM,NEK4,OSTM1,CCDC174,CDK5RAP1,SPIN3,TBRG1,SUV39H2,PPP1R12A,MIS18A,RNPC3,C14orf28,TRPS1,CCDC77,DOP1A,KIAA2026,KMT2C,AADAT,CCSAP,MRPS30,STAU2,SIKE1,SCAF4,MARCHF8,YTHDF3,CCNT2,SNX14,RRM1,ORC3,NRAS,CENPQ,SAV1,NEK2,ZNF91,ZFP91,HSD17B11,TRAPPC11,OPHN1,ATG16L1,SHCBP1,ATP13A3,TUBGCP5,RBM25,C1orf131,KLHL9,PKIA,SMARCC1,TTC30A,UBR5,PRIM1,RESF1,TRAM1L1,ETNK1,SERTAD2,PLXDC1,DTL,E2F6,RNF114,EPC1,ZNF22,ZC3H13,PANK3,NRP1,TMEM69,ZNF717,HEATR6,SLC15A4,MAP3K7,ATXN3,ARGLU1,NEPRO,LIG4,POLQ,SRPK2,USP37,MFSD11,PNRC1,ZNF93,SGSM2,CCDC90B,ORC5,TGS1,VMAC,KRI1,PPP4R1,TMEM161B,KRR1,PYGO1,TBC1D2B,FAM149B1,CENPS,ATAD2,DENND1B,ADAM17,PPP4R3A,MAIP1,TMTC3,RFX3,UBA3,TMEM245,STAT1,TMEM68,CAD,VWA8,C3orf38,USP48,CYLD,ZCCHC10,PARP8,HELZ,ELF2,TMEM65,ZNF43,CWF19L1,COA5,CDC14B,CACUL1,ARL5B,PMS2,RECQL,LZIC,SH3BP5L,TMX4,TPP2,HDAC4,NR2C1,AP1S2,BRD9,ADAT1,RCC2,SOS1,AVL9,MED1,ZDHHC21,WDR37,SEC22C,SRRT,CEP112,DNAAF2,ATG5,AP3M1,CPEB2,TRIM66,KIF5B,TADA1,TNPO1,C18orf54,MSL2,POT1,EIF5,STAG1,TMEM267,ZCCHC8,KAT7,WDR91,GNA13,YIPF5,AASDH,RABGAP1L,KIAA0895L,MMD,NDUFAF6,TRANK1,ATAD3B,ZNF74,SLC25A43,PHYKPL,SF3B1,POFUT2,ANKIB1,PRKRA,MXRA7,ZFP69,PTK7,LDLRAD4,ATP11B,GOLGA1,KIF3C,GNL3,MINDY2,CDCA4,CENPT,MTPN,USP24,POGZ,CCDC43,BRWD3,FBXO45,AKAP10,NUDCD1,RBMX,RBM4B,MRPS31,ADAT2,WDSUB1,TANC2,MAP3K12,ORC4,ABCC9,FUBP1,SLC38A6,MMUT,SMPD4,TRIM33,GJC1,CXXC1,NBAS,ACVR1,KIDINS220,DCAF1,DDX17,C12orf66,HAUS5,UBTD2,FMR1,ZDHHC2,DHX33,CTDSPL2,TMEM165,GNPDA2,FBXL12,CYRIB,LIN52,SMC6,CDAN1,EXOC6B,GPALPP1,C16orf87,UBFD1,PCYOX1L,DLG1,ANO6,CERT1,CRYZL1,LRP12,SUPT3H,STK36,GOLIM4,GOLGA8B,SS18,ALPK1,ZFX,CBWD2,GOLGA8A,RABGAP1,GNAI3,SETD4,CPSF3,TSNAX,TYW5,SEPTIN7,CEP162,DST,RBMS1,TRIP12,ZFP28,RAD18,ZNF17,CRBN,RNF169,POLD3,ZNF84,CCP110,BICRAL,KIF15,HACD4,SLFN11,ZDHHC6,PRPF40B,PCMTD1,JMJD1C,ARHGAP21,NGLY1,NAE1,VPS37A,USP20,KBTBD2,TRMT10A,IFIT5,ATF2,MRFAP1L1,CDK2AP1,SEC22B,COPS2,HELQ,CPLANE1,CEP76,USP18,ERI2,SLC25A32,CSNK1G3,SH3D19,GPR161,MDM2,BRD1,IPP,PPID,CHM,SUGP2,HSPA14,PHF10,NUP50,FBXL17,GDAP1,ZBED4,WDCP,ZFP14,TUBGCP6,TIMELESS,CCDC14,SMARCC2,KCTD10,MYO9A,ACAD8,ITGB1,TVP23B,PBX3,SGCB,ACTR6,UBA2,KLHL42,KNTC1,RANBP6,CEP72,GKAP1,TRIM59,SLC33A1,EXOC8,PSMD1,ATR,STRN3,TMEM106A,HSPA13,OGT,RCCD1,GZF1,BLZF1,CNST,FBXO5,CLOCK,TUT4,DNAJC16,RBM15,CHKB,CEP89,ANAPC10,BBIP1,ESCO2,OSGEP,BACE1,CLK1,ATXN7,MRRF,PRC1,WASHC3,MCMBP,RFX7,ACADM,MAP2K4,VTI1A,MBD5,RAF1,RDH14,ZADH2,GON4L,TRAM1,CDC27,CERS6,RACGAP1,CASK,CHIC1,ORMDL1,ZNF45,YTHDC1,COQ7,BRIX1,TMEM185B,TFCP2,GTF2H1,PASK,MLH1,MTMR2,CCDC191,TAF5L,TNKS,NR2C2,FBLN5,PPP4R2,TAF1A,BICD1,RMI1,SCRN3,FAM114A2,TMCO6,ARHGAP29,NCAPG2,GLS,TMEM126B,MAN2A1,MBTD1,SEPSECS,COMMD8,IFT122,MAN1A2,MANEA,CEP192,TMEM14A,VPS13A,ERCC5,ZFP3,PLBD2,JKAMP,LONRF1,RNF214,KBTBD6,MAPK1IP1L,SDHD,RARS2,DPM1,PIK3R4,FAM172A,THADA,CEP20,ILF3,LENG8,SMURF2,FBXL3,ACTR3,PPOX,PRICKLE2,WDR53,PIF1,PPWD1,RC3H2,SLC30A7,SASS6,CLASP1,NHLRC3,SH3YL1,ASTE1,ADGRA3,HPF1,CASP2,MNS1,KRIT1,IPMK,COG5,SERINC1,PROSER1,VPS50,WAPL,SHLD2,ZZZ3,ZMYM5,C2CD3,TAMM41,GFOD2,PCID2,SETX,CDK20,TOP3A,TRIM13,PHC1,LRRFIP2,SACS,MTRR,PUS7L,MED6,MEIS1,MLF1,CTBS,CD47,GGNBP2,ELMO1,ERCC6L2,CABLES2,FBXO3,ATP11C,ZBTB2,RTTN,REV3L,WDR47,IWS1,AGTPBP1,CEP70,NDC80,ENOSF1,MAU2,DZIP3,GANC,WDR7,FNBP4,CDR2,PPM1K,IL11RA,TMF1,SSH2,MLLT10,BHLHB9,TSTD2,MED23,UNC50,CLEC2D,MTIF2,SUMO2,BCAS2,NSUN2,ZNF720,STIL,MIER3,NCKAP1,BTBD7,PAFAH1B2,CLHC1,GPBP1,FAM120C,HIBCH,MFF,ANLN,LSG1,EHMT1,TTBK2,ZFAND6,TP53BP1,CDK19,ZFHX3,ARID4A,PIGF,RNF115,ETV5,AASDHPPT,ACP1,TTC37,VCPIP1,NSL1,CLIP4,RBBP9,RHOBTB3,WDR27,MPDZ,FAM104A,EME2,BBS7,MESD,BSDC1,TFDP2,PNISR,GEN1,SFPQ,PLPP5,SEPTIN8,DNAJC9,ARHGAP42,ZNF10,FBXO9,ABCB10,TAF11,RNF149,CEP164,CEP120,CDC42BPA,B3GALNT2,OSBPL9,ROCK1,WASHC2C,INTS12,FAM214A,N4BP2,NLGN2,CEP250,ARID2,SMARCAL1,STAM2,TTC5,FADS1,MALT1,PICALM,DBR1,HEATR1,WDR3,PBRM1,CCNL2,TCAF1,ANKRD10,TENT4A,OBI1,NUSAP1,CHTOP,TATDN1,RND3,SSH1,STAT4,COX18,OSBPL7,EEA1,LPIN1,KAT2A,UBE2W,PHTF2,CHD6,CLDND1,PLA2G6,C5orf22,PDCD2,FBXW7,ZFP30,SPRTN,MRPL50,POLI,AGFG1,LIN9,PRPF39,ITSN2,TRIM45,SRRM2,PJA2,BTN2A1,IDS,SLC4A7,CMTR2,GORAB,UBR3,CEP44,DBT,PROSER3,GMCL1,C10orf88,KPNA3,ANKRA2,TFAM,SOGA1,CELF1,FAM126A,CDC40,EPG5,CCDC121,PEX3,CANX,OGG1,PMS1,QRICH1,FAM160A2,ZNF83,DEPDC1,NSUN6,C5orf34,STARD4,UHRF1BP1L,CDS2,RBBP5,SZT2,PRKDC,GIN1,FASTKD2,STK4,CRAMP1,NUDCD2,ARL6IP6,CENPI,CASP3,XRN2,CCAR1,PTP4A2,CENPJ,UXS1,RRAS2,TMEM131,AREL1,MTREX,NSMCE4A,POLR3F,SLC10A7,HINFP,KLHL8,NANP,GTF2H3,APBB3,IFIH1,YPEL5,STX2,DYNC1LI2,RUFY2,WBP1,CDYL,TEPSIN,RAD17,TRIT1,PDCL,LRCH4,NUP133,AGAP6,PELI2,BET1,RYBP,GTPBP2,RBM39,GPATCH8,PGS1,MDC1,NME7,C7orf31,TMEM44,CKAP5,BLOC1S6,INTS3,TWSG1,PDS5A,AZIN1,NEK3,AP4S1,CSAD,PHLDB1,ATRX,FEZ2,RBM28,IKZF5,C2CD5,EME1,FRA10AC1,ZBTB5,PTEN,BCLAF1,OGA,RASAL2,IFT27,PAN3,MED28,RNF168,NUMBL,DDX59,ISCA1,NUMB,SHTN1,TTK,BCAP29,TM2D3,SEMA4F,OLA1,SCLT1,CALCOCO1,ANKRD52,METTL25,SPPL3,C2orf74,DPP8,MTG1,APAF1,PAK1IP1,WDR55,TOGARAM1,FAM217B,LPGAT1,FAM76B,GTPBP3,RNF217,VPS29,EOGT,H2AZ2,ADNP,ESYT2,FBXO33,MBD1,JARID2,ARID1B,NDFIP2,GID4,SPPL2A,MRNIP,SS18L1,ABL2,RSBN1L,RAD52,CEP43,DYRK1A,STRN,MARF1,INO80,CEP290,NEK1,GNG2,LEO1,RAD21,WSB1,TRAK2,RSPRY1,WDR61,PGM2L1,USP21,ALS2,NSD2,TRIM52,NCBP3,ATL3,ZC3HAV1L,SALL2,BAHCC1,MTX3,SAP130,YOD1,MCM3AP,TMEM230,STRADA,NAF1,CDC14A,RANBP9,LMBRD2,TOP2A,TPRKB,DOCK4,CHURC1,FSTL1,PSMC3IP,CHML,SFMBT1,IKZF2,TRMT61B,DOT1L,RPP40,MICU2,LDB1,ADCY3,TUBD1,UTP15,ERLIN1,CDCA7L,FRYL,TBC1D31,KIF13A,USP31,NSUN3,TEP1,MAN2C1,TAB3,TBC1D5,SFMBT2,WHAMM,LIN7C,TET2,RABL2B,CFAP97,ADH5,SPAG9,GART,TSPYL2,XRN1,TTF2,POP1,ANAPC1,WDR89,IFT52,TAB2,STX7,LYSMD4,CCDC88A,RPS6KA3,N4BP2L2,DCLRE1C,OXSM,FBXL4,L3HYPDH,RNF34,UNKL,WWP1,GPCPD1,ZNF24,ASCC3,ZFAND5,PIGW,PIGX,KMT2B,IRAK4,GSTCD,NBN,RHOT1,TP53INP1,KLHL28,KDM5B,RSF1,ABITRAM,VIRMA,CLK4,ZUP1,UBE2T,GPRASP2,KDM5A,ARHGAP19,SIAH1,MLKL,TRIP4,LIX1L,NOD1,ARIH1,CARNMT1,PPTC7,ARID4B,YTHDC2,FANCD2,FEM1C,METTL17,FAN1,TOP2B,RPAP3,DHX58,SLC20A1,BLM,UBLCP1,RABL2A,LEF1,DRAM1,RBBP4,TMEM39A,CEP19,FOXJ3,BMI1,SLC35A5,KDM7A,CBX1,MIER1,RASGRP1,TTC21B,ARMT1,NPAT,FANCF,AP1G1,C4orf46,ARID1A,RAB3GAP2,UTP23,NIP7,USP35,SETD5,ZFP62,SOCS4,RUVBL1,BRAF,MAP1A,ACSL4,FRMD4A,BAZ1A,NKAPD1,PTPN14,GUF1,SLC35F5,SRSF2,CUL9,PRRC1,SSR1,DHX29,SKIL,RSRC1,KIF23,ANKRD28,FIGNL1,FUT10,R3HDM1,TLR1,FAM193B,BRD2,LSM11,CDCA7,ZFC3H1,MIOS,NFYB,CENPE,SP3,ARHGEF7,CHSY1,VCPKMT,HIPK1,TMEM50B,SIK3,DPH3,PIK3C2A,PAFAH1B1,SEPHS1,POLM,PALB2,EIF2AK2,ABCE1,TRIM27,SLF1,MARCHF6,EIF4ENIF1,CUL3,LTN1,ATM,ADO,SNX19,MED14,NUP54,CDK13,TRAF6,ZC3H10,BBOF1,FEM1B,SLFN12,PAPSS1,DBF4,RELCH,RSBN1,RBM27,ATG12,NR1D2,PIBF1,AHI1,LAMTOR3,RORA,CNOT6L,ATP8B2,RNF144A,PGAP1,MOB1B,FAM111A,ACYP2,PARP11,GCFC2,ASF1A,UBR1,PHF12,ACTR8,EZH2,SNRNP48,RC3H1,UBE2J1,GALNT7,ZNF44,SLC12A6,SMG1,MTURN,KANSL2,XIAP,ELP4,BCLAF3,TMEM43,SLC35B4,DNAJB14,CHUK,PPM1B,MCM9,IFT80,PHTF1,ABRAXAS1,OIP5,SPECC1L,UBN2,KIAA0586,TSN,ABHD18,ABTB1,SLC5A3,SMCHD1,CREBRF,C4orf33,MTA3,TARS3,ZNF41,ZC3H8,SLC35D1,AKT3,TRAPPC6B,ATE1,WDR82,RAB2B,ACOT9,KNOP1,SLC38A9,PGBD1,FNTA,TADA2A,TGDS,KMT2D,SYNRG,CYB5R4,CETN3,CENPO,USP40,G2E3,TRAPPC13,GPR180,PTPN22,TUBGCP3,CBLL1,ROCK2,TMEM218,NMT2,ANKRD26,BTBD10,C18orf32,C2orf68,WAC,MRE11,NOL4L,RBM6,TRMT13,AKTIP,SREK1IP1,NT5C2,ARPP19,VPS54,LYRM7,CCDC142,SPC25,PAXIP1,CBX5,EPM2AIP1,PGM3,ST3GAL2,PSME3IP1,MAML1,PHF5A,ANKFY1,BORCS5,DIXDC1,TPR,PIGB,NOC3L,PCGF6,CEPT1,MCM4,DMXL2,NCBP2,SRSF7,TBC1D15,ATAT1,INVS,EXO5,CEP63,TMEM17,EIF3A,XRCC5,WDR11,PARPBP,EXOC2,ADPGK,RBM23,YTHDF1,AKAP8,CEP57L1,UBTF,SEC24B,VPS13B,DPY19L2,WDR12,KATNBL1,TAF4,TBP,SLX4IP,GABPA,DPY19L1,TET3,TTC30B,BNIP2,CLK3,INCA1,ATMIN,GFM2,UBXN7,LRCH3,CNOT4,SON,RSU1,DHX57,C1orf174,MC1R,RLIM,ZMIZ1,KLHL29,TDP1,PTCD3,NREP,NFRKB,RAD1,BRWD1,CNOT1,NIN,CSTF3,DDI2,BORCS7,RBMS3,NAPEPLD,C12orf65,MLLT11,TRPC4AP,RO60,TBCK,ACBD3,PPT1,BBS10,SEPTIN2,SP4,RBM43,SETD6,MBIP,ARL5A,MAP7D3,LNPEP,CDC23,ZNF34,KIAA0753,NDOR1,TMEM41B,LTV1,DDHD1,MAP4K5,PHAX,TMEM128,DLG5,RBM41,GON7,CIAO1,RNGTT,POLR2D,CCNL1,TLK1,USP28,TMEM263,ASB7,SUMO1,VPS33A,ZDHHC20,NCOR1,MEAF6,SCMH1,RBM45,C5orf15,NFXL1,YAE1,RNFT1,GEMIN2,VIPAS39,DDX31,DCUN1D1,ABI1,WDR36,MED4,DDX58,RPS6KC1,KANSL1,ZNF3,TBC1D20,ABCD4,HAUS6,TBC1D8,PTPN2,SYNJ1,NEIL1,FAM161A,KDM2B,POLE,C12orf4,DDX5,STX17,MRPS10,PPP2R5E,LIPT1,CWF19L2,LYST,CNIH1,CCND2,PNN,MICAL3,DSN1,LUC7L2,GAPVD1,ARHGAP5,DGKD,KATNA1,BBS4,CASP8,TEX30,TRA2A,KMT2A,REV1,NEURL4,KDM1B,NRIP2,CNTROB,FAM135A,ETV3,RWDD2A,IMMP1L,LAMP2,LYPLA1,CEBPZ,HACE1,GABPB2,KLF9,ATXN7L1,MAPKBP1,ODF2L,C21orf91,TAF9B,TRIM25,TBL1XR1,NRF1,WASHC4,ZXDC,CCDC92,NSRP1,FNDC3A,PIGL,ZC3H7A,USP39,LRRC28,BAZ2A,BRIP1,DCAF8,SPRYD7,HJURP,PAK2,NKIRAS1,SNX29,MAP3K4,CEP350,CXorf38,CENPN,CLASP2,ATP2B1,SUPT7L,QSOX2,EXTL2,RICTOR,SNX16,ARL6,CTSO,OSGEPL1,RBM4,RAB11FIP2,URI1,ANAPC7,EXOG,KCTD9,NCOA5,SCAI,DCAF5,ANKRD40,PRIMPOL,WDHD1,TMEM50A,TENT4B,RAB22A,SCAPER,EZH1,LRP6,ELMOD3,FBXW2,POLR3A,GSTM2,SLC7A6,RSAD2,DYNC2I1,DCAF13,MCM6,ASXL2,NINL,SLC25A17,PNPLA8,CNBP,MAP4K3,PFAS,C12orf76,FAM228B,ELK4,TIGD1,USF3,FBXO11,BBS9,CWC25,TTC32,TAX1BP1,ARSB,STMN3,CSGALNACT2,UTP6,ZNF18,TEX10,APPBP2,CYP2R1,TBC1D12,C1D,CNOT2,ABCA1,C1orf109,RBM48,UBE2D3,PIKFYVE,AARSD1,RBM5,RAB3GAP1,ULK2,NKTR,FARP2,SLC30A9,CEP170,SLC35B3,CUL2,ZCRB1,SCYL2,PARP6,WDR33,PACC1,C17orf80,TRA2B,PIAS2,CRIPT,TIPIN,ASXL1,LRRC40,USPL1,TTC33,CCDC112,LIG1,LACC1,PRPF4B,TRAPPC2 | | Exist in public source | | NA |
| lncRNA targets the promoter region and positively regulates the gene expression. |
| lncRNA targets the promoter region and negatively regulates the gene expression. |
| lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
| Only predicted by lncTar | | KRT8,TECR,TMEM147,CLDN7,PRDX2,PRSS8,MCRIP2,DBP,HAGH,SDCBP2,DDT,ECH1,GET3,NUDT22,ENDOG,NUDT8,MLST8,GSTZ1,CHID1,PCYT2,ALDOA,SLC25A11,VPS28,NUDT16L1,GALE,PHB,CHCHD10,MFSD5,SLC25A39,TMEM238,KCNQ1,LGALS3,ATP6V0C,ASL,TMUB1,LONP1,CCDC22,BCAT2,PPP1R16A,ABHD11,PHPT1,DCXR,TOM1,YIF1A,UBXN6,ANTKMT,GPX4,ATP6V0D1,RABL6,STXBP2,FAM174C,TMEM102,MRPS34,CLTB,PXMP2,MICOS13,TSR3,WBP2,ABHD14B,LSR,CAPNS1,UQCRC1,MYDGF,PGAP6,TOLLIP,FAM3A,FKBP8,COPE,NECTIN2,PPP1CA,MVP,APRT,ADAT3,USF2,ERCC1,GRHPR,CCDC124,SARS1,GAPDH,PPDPF,RAB25,GPX1,MED16,NDUFV1,BLVRB,AKR7A2,HMOX2,RNH1,NDUFS2,MRPL37,HSPB1,PLEKHJ1,ELOB,ATP6AP1,TXN2,ETHE1,HDHD3,TEX264,FBXW5,STUB1,PPP2R1A,IDH3G,NSDHL,ECI1,NDUFB11,NDUFS6,BSG,NUDT14,AKR7A3,TSPO,SSR4,RIN1,NAXE,AP1M2,C1orf122,OAZ1,NANS,TBL3,POLR2I,C7orf50,SLC22A18,NDUFS8,NDUFS7,RPL10,MFSD3,ATP5F1D,MCAT,COX8A,POLR2E,TMC4,COX5A,GTPBP6,EPN1,NDUFB7,TMEM161A,LAMTOR1,ANKRD9,BRI3,CRB3,GPI,GNB2,PMM1,NDUFA3,TJP3,DNPH1,NDUFAF3,NUBP2,LENG9,ILVBL | | Exist in public source | | NA |
| lncRNA targets the skipped exon region. | | -lncRNA and exonskipping events are positively correlated. |
 |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | | ENSG00000223960 | ENST00000415236 | exon_skip_33516 | chr1:156938417-156938513 | -15.02 | -0.1633 | ARHGEF11 | ENST00000361409 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_52231 | chr10:93392916-93392955 | -8.17 | -1.0212 | MYOF | ENST00000359263 | In-frame | | ENSG00000223960 | ENST00000453026 | exon_skip_90104 | chr12:10709907-10710114 | -21.03 | -0.1696 | YBX3 | ENST00000228251 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_293641 | chr17:76091142-76091235 | -9.96 | -0.1215 | EXOC7 | ENST00000589210 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_430633 | chr4:82861630-82861708 | -14.07 | -0.2010 | SEC31A | ENST00000355196,ENST00000395310,ENST00000448323 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_460899 | chr6:85538837-85538864 | -7.75 | -0.4559 | SNX14 | ENST00000314673 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_482144 | chr8:22539468-22539498 | -8.11 | -0.2896 | PPP3CC | ENST00000240139 | In-frame |
| -lncRNA and exonskipping events are negatively correlated. |
| LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | | ENSG00000223960 | ENST00000415236 | exon_skip_44853 | chr10:104010815-104010908 | -9.72 | -0.1296 | SLK | ENST00000369755 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_59476 | chr11:57815914-57816001 | -11.13 | -0.1568 | CTNND1 | ENST00000399050 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_302779 | chr19:13078612-13078735 | -14.30 | -0.1416 | NFIX | ENST00000592199 | In-frame | | ENSG00000223960 | ENST00000415236 | exon_skip_386291 | chr3:108050577-108050602 | -5.83 | -0.3429 | CD47 | ENST00000361309 | Frame-shift | | ENSG00000223960 | ENST00000415236 | exon_skip_114365 | chr14:74290026-74290118 | -11.10 | -0.2413 | ABCD4 | ENST00000356924 | Frame-shift | | ENSG00000223960 | ENST00000415236 | exon_skip_382458 | chr3:38131595-38131638 | -8.38 | -0.2044 | ACAA1 | ENST00000333167 | Frame-shift |
| lncRNA targets by miRNA. |
| LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source |
| RNA A-to-I editing events in lncRNA. |
| LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
| Edited-associated DElncRNAs in cancer. |
| LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
| Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
| LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
| Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
| LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
| lncRNA regulates differentially expressed genes by function as enhancer. |
| LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation | | ENSG00000223960 | ENSG00000055332 | EIF2AK2 | ACC,BLCA,BRCA,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LGG,LUAD,LUSC,MESO,OV,PAAD,PRAD,SARC,SKCM,STAD,TGCT,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000102781 | KATNAL1 | ACC,BLCA,BRCA,DLBC,ESCA,HNSC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SKCM,STAD,TGCT,THYM,UCEC,UCS,UVM | PCPG | | | ENSG00000223960 | ENSG00000111752 | PHC1 | ACC,BRCA,ESCA,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,STAD,TGCT,THCA,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000113966 | ARL6 | ACC,BRCA,DLBC,ESCA,LAML,LUAD,PAAD,PCPG,SKCM,STAD,THCA,UCEC | PCPG | | | ENSG00000223960 | ENSG00000125885 | MCM8 | ACC,BLCA,DLBC,HNSC,KICH,KIRC,KIRP,LGG,OV,SKCM,TGCT,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000147650 | LRP12 | ACC,BLCA,ESCA,HNSC,PAAD,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000163013 | FBXO41 | ACC,HNSC,KIRC,KIRP,PAAD,PCPG,TGCT,THYM,UVM | HNSC,PCPG | | | ENSG00000223960 | ENSG00000164221 | CCDC112 | ACC,HNSC,KICH,KIRP,PAAD,PCPG,SKCM,TGCT,THCA,THYM,UCEC | PCPG | | | ENSG00000223960 | ENSG00000180011 | ZADH2 | ACC,LAML,PCPG,THCA,UVM | PCPG | | | ENSG00000223960 | ENSG00000184445 | KNTC1 | ACC,BRCA,ESCA,HNSC,KIRC,KIRP,LAML,LGG,LUAD,LUSC,MESO,OV,SKCM,TGCT,THYM,UCEC,UCS | HNSC | | | ENSG00000223960 | ENSG00000197183 | NOL4L | ACC,DLBC,KIRC,KIRP,PCPG,PRAD,THYM,UCS | PCPG | | | ENSG00000223960 | ENSG00000198908 | BHLHB9 | ACC,ESCA,KICH,LUAD,OV,PCPG,PRAD,THCA,UCEC,UCS,UVM | PCPG | | | ENSG00000223960 | ENSG00000018189 | RUFY3 | BLCA,BRCA,DLBC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SKCM,STAD,THCA,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000118193 | KIF14 | BLCA,DLBC,ESCA,HNSC,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000119969 | HELLS | BLCA,DLBC,ESCA,HNSC,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000123485 | HJURP | BLCA,HNSC,LGG,OV,SKCM,TGCT,THYM | HNSC | | | ENSG00000223960 | ENSG00000126790 | L3HYPDH | BLCA,CESC,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LUAD,PAAD,STAD,TGCT,THCA,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000163507 | CIP2A | BLCA,DLBC,ESCA,HNSC,KIRC,LGG,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000163872 | YEATS2 | BLCA,ESCA,HNSC,KICH,KIRC,LGG,TGCT,UCS,UVM | HNSC | | | ENSG00000223960 | ENSG00000164430 | CGAS | BLCA,DLBC,HNSC,KIRC,OV,SKCM | HNSC | | | ENSG00000223960 | ENSG00000182287 | AP1S2 | BLCA,KIRC,LUAD,PAAD,PCPG,STAD,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000198826 | ARHGAP11A | BLCA,DLBC,HNSC,KIRC,LGG,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000128881 | TTBK2 | BRCA,ESCA,HNSC,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SKCM,STAD,TGCT,THCA,THYM | PCPG | | | ENSG00000223960 | ENSG00000163539 | CLASP2 | BRCA,DLBC,LAML,LUAD,PAAD,PCPG,PRAD,SARC,STAD,TGCT,THCA,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000172244 | C5orf34 | BRCA,HNSC,LAML,LUAD,OV,SKCM,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000175265 | GOLGA8A | BRCA,GBM,HNSC,KIRC,LAML,LUAD,TGCT,UVM | HNSC | | | ENSG00000223960 | ENSG00000175455 | CCDC14 | BRCA,DLBC,ESCA,GBM,HNSC,KICH,KIRC,KIRP,LAML,LGG,LUAD,LUSC,OV,PAAD,PRAD,SKCM,TGCT,THCA,THYM,UCEC,UCS,UVM | HNSC | | | ENSG00000223960 | ENSG00000178295 | GEN1 | BRCA,ESCA,GBM,HNSC,LUAD,OV,PCPG,SKCM,TGCT,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000186767 | SPIN4 | BRCA,KIRC,KIRP,LAML,LGG,PCPG,SKCM,THCA,UCEC | PCPG | | | ENSG00000223960 | ENSG00000119242 | CCDC92 | CESC,KICH,KIRP,PAAD,PCPG,STAD | PCPG | | | ENSG00000223960 | ENSG00000165572 | KBTBD6 | CESC,HNSC,KICH,PAAD,PCPG,TGCT,UVM | PCPG | | | ENSG00000223960 | ENSG00000178498 | DTX3 | CESC,ESCA,HNSC,KIRC,KIRP,LUSC,MESO,OV,PAAD,PCPG,SARC,STAD,THCA | PCPG | | | ENSG00000223960 | ENSG00000188153 | COL4A5 | CESC,ESCA,HNSC,LAML,PRAD,THCA,UCEC,UCS,UVM | HNSC | | | ENSG00000223960 | ENSG00000010404 | IDS | DLBC,PAAD,PCPG,PRAD,STAD,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000024526 | DEPDC1 | DLBC,ESCA,HNSC,OV,SKCM,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000051341 | POLQ | DLBC,ESCA,HNSC,OV,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000071794 | HLTF | DLBC,ESCA,HNSC,LGG,PAAD,SKCM,TGCT,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000075218 | GTSE1 | DLBC,ESCA,HNSC,LGG,OV,THYM | HNSC | | | ENSG00000223960 | ENSG00000078081 | LAMP3 | DLBC,ESCA,HNSC,OV,PRAD | HNSC | | | ENSG00000223960 | ENSG00000091651 | ORC6 | DLBC,ESCA,HNSC,LGG,OV,SKCM,THYM | HNSC | | | ENSG00000223960 | ENSG00000102384 | CENPI | DLBC,ESCA,HNSC,SKCM,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000117533 | VAMP4 | DLBC,KICH,KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,SKCM,TGCT,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000120334 | CENPL | DLBC,ESCA,HNSC,LGG,OV,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000121621 | KIF18A | DLBC,ESCA,HNSC,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000122952 | ZWINT | DLBC,HNSC,KICH,LGG,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000123219 | CENPK | DLBC,ESCA,HNSC,LAML,LUAD,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000123473 | STIL | DLBC,HNSC,SKCM,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000131470 | PSMC3IP | DLBC,ESCA,HNSC,KIRC,KIRP,LGG,OV,SKCM,TGCT,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000131747 | TOP2A | DLBC,HNSC,LGG,OV,SKCM,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000134326 | CMPK2 | DLBC,GBM,KICH,MESO,PCPG,PRAD | PCPG | | | ENSG00000223960 | ENSG00000137804 | NUSAP1 | DLBC,HNSC,LGG,OV,TGCT,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000137807 | KIF23 | DLBC,ESCA,HNSC,OV,THYM | HNSC | | | ENSG00000223960 | ENSG00000138078 | PREPL | DLBC,KICH,LUAD,PAAD,PCPG,SARC,SKCM,TGCT,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000138092 | CENPO | DLBC,HNSC,KICH,KIRC,LGG,OV,TGCT,THCA,THYM | HNSC | | | ENSG00000223960 | ENSG00000138778 | CENPE | DLBC,ESCA,HNSC,LUAD,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000138801 | PAPSS1 | DLBC,ESCA,KICH,PAAD,PCPG,UVM | PCPG | | | ENSG00000223960 | ENSG00000139597 | N4BP2L1 | DLBC,KICH,KIRC,KIRP,LAML,LUAD,PAAD,PCPG,PRAD,THYM,UCS,UVM | PCPG | | | ENSG00000223960 | ENSG00000139625 | MAP3K12 | DLBC,ESCA,KIRC,KIRP,LGG,LUAD,PAAD,PCPG,STAD,TGCT,THYM,UVM | PCPG | | | ENSG00000223960 | ENSG00000143476 | DTL | DLBC,ESCA,HNSC,LGG,OV,TGCT,THYM | HNSC | | | ENSG00000223960 | ENSG00000144136 | SLC20A1 | DLBC,HNSC,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000144320 | LNPK | DLBC,ESCA,HNSC,LAML,LGG,LUAD,PCPG,PRAD,SKCM,TGCT,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000145495 | MARCHF6 | DLBC,ESCA,KIRC,LAML,LUAD,PAAD,PCPG,SARC,TGCT,THCA,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000146535 | GNA12 | DLBC,ESCA,HNSC,KICH,TGCT | HNSC | | | ENSG00000223960 | ENSG00000152749 | GPR180 | DLBC,HNSC,KICH,KIRC,LAML,LUAD,PAAD,PCPG,SKCM,TGCT,THCA,THYM,UCEC | PCPG | | | ENSG00000223960 | ENSG00000156787 | TBC1D31 | DLBC,HNSC,SKCM,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000164187 | LMBRD2 | DLBC,LUAD,PAAD,PCPG,THYM,UCEC | PCPG | | | ENSG00000223960 | ENSG00000166845 | C18orf54 | DLBC,ESCA,HNSC,KIRC,LGG,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000166881 | NEMP1 | DLBC,ESCA,HNSC,KIRC,KIRP,LAML,LGG,LUAD,MESO,OV,PRAD,TGCT,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000169607 | CKAP2L | DLBC,ESCA,HNSC,SKCM,TGCT,THYM | HNSC | | | ENSG00000223960 | ENSG00000169679 | BUB1 | DLBC,HNSC,LGG,OV,SKCM,TGCT,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000171320 | ESCO2 | DLBC,HNSC,OV,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000184047 | DIABLO | DLBC,HNSC,LAML,LGG,PCPG,TGCT | PCPG | | | ENSG00000223960 | ENSG00000184979 | USP18 | DLBC,GBM,HNSC,KICH,LGG,MESO,PAAD,SKCM | HNSC | | | ENSG00000223960 | ENSG00000196584 | XRCC2 | DLBC,ESCA,HNSC,LAML,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000197299 | BLM | DLBC,HNSC,LAML,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000198554 | WDHD1 | DLBC,ESCA,HNSC,LGG,OV,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000213186 | TRIM59 | DLBC,ESCA,HNSC,LAML,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000008710 | PKD1 | ESCA,KIRC,PAAD,PCPG,STAD,THCA,UCS | PCPG | | | ENSG00000223960 | ENSG00000072832 | CRMP1 | ESCA,KICH,KIRP,LGG,OV,PAAD,PCPG,STAD | PCPG | | | ENSG00000223960 | ENSG00000084731 | KIF3C | ESCA,HNSC,KICH,PAAD,STAD,TGCT,THYM,UCS | HNSC | | | ENSG00000223960 | ENSG00000111602 | TIMELESS | ESCA,HNSC,KICH,LGG,OV,TGCT,THYM | HNSC | | | ENSG00000223960 | ENSG00000117632 | STMN1 | ESCA,HNSC,KICH,LAML,OV,PCPG,THYM,UVM | HNSC,PCPG | | | ENSG00000223960 | ENSG00000135622 | SEMA4F | ESCA,HNSC,KICH,PAAD,SARC,TGCT,UCS | HNSC | | | ENSG00000223960 | ENSG00000136492 | BRIP1 | ESCA,HNSC,LAML,LUAD,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000145687 | SSBP2 | ESCA,KICH,KIRC,KIRP,LAML,LUAD,PAAD,PCPG,PRAD,STAD,THYM | PCPG | | | ENSG00000223960 | ENSG00000152253 | SPC25 | ESCA,HNSC,KIRC,LGG,THYM | HNSC | | | ENSG00000223960 | ENSG00000154920 | EME1 | ESCA,HNSC,LGG,OV,THYM | HNSC | | | ENSG00000223960 | ENSG00000158163 | DZIP1L | ESCA,GBM,HNSC,KIRC,KIRP,SKCM,TGCT,UCS | HNSC | | | ENSG00000223960 | ENSG00000163918 | RFC4 | ESCA,HNSC,KICH,LGG,OV,SKCM,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000166451 | CENPN | ESCA,HNSC,LGG,OV,SKCM,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000166848 | TERF2IP | ESCA,PAAD,PCPG,SKCM,STAD,TGCT,THYM,UVM | PCPG | | | ENSG00000223960 | ENSG00000170264 | FAM161A | ESCA,KIRP,LAML,LUAD,OV,PCPG,SKCM,TGCT,THCA,UCEC,UCS,UVM | PCPG | | | ENSG00000223960 | ENSG00000170921 | TANC2 | ESCA,KICH,KIRC,LUAD,PCPG,TGCT,UCEC | PCPG | | | ENSG00000223960 | ENSG00000196227 | FAM217B | ESCA,KICH,KIRC,KIRP,MESO,PCPG,PRAD,SKCM,STAD,TGCT,UCEC,UCS,UVM | PCPG | | | ENSG00000223960 | ENSG00000006025 | OSBPL7 | GBM,KICH,KIRC,KIRP,LGG,PCPG,THYM | PCPG | | | ENSG00000223960 | ENSG00000140451 | PIF1 | GBM,HNSC,OV,SKCM,THYM | HNSC | | | ENSG00000223960 | ENSG00000182628 | SKA2 | GBM,HNSC,KICH,PCPG,SKCM,THCA,THYM,UVM | PCPG | | | ENSG00000223960 | ENSG00000196459 | TRAPPC2 | GBM,KIRC,KIRP,LAML,LGG,LUAD,PCPG,SKCM,THYM,UCEC,UVM | PCPG | | | ENSG00000223960 | ENSG00000077152 | UBE2T | HNSC,KICH,LGG,OV,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000104147 | OIP5 | HNSC,LAML,LGG,TGCT,THYM | HNSC | | | ENSG00000223960 | ENSG00000112742 | TTK | HNSC,OV,SKCM,TGCT,THYM,UCEC | HNSC | | | ENSG00000223960 | ENSG00000112877 | CEP72 | HNSC,KICH,KIRP,LGG,SARC,TGCT,UVM | HNSC | | | ENSG00000223960 | ENSG00000117650 | NEK2 | HNSC,LGG,OV,SKCM,THYM | HNSC | | | ENSG00000223960 | ENSG00000136982 | DSCC1 | HNSC,KIRC,LAML,LGG,SKCM,TGCT,THYM,UVM | HNSC | | | ENSG00000223960 | ENSG00000149554 | CHEK1 | HNSC,LGG,SKCM,TGCT,THYM,UCEC,UVM | HNSC | | | ENSG00000223960 | ENSG00000149636 | DSN1 | HNSC,KICH,KIRC,KIRP,LGG,OV,SKCM,TGCT,UVM | HNSC | | | ENSG00000223960 | ENSG00000165661 | QSOX2 | HNSC,KICH,LGG,SARC,TGCT,UVM | HNSC | | | ENSG00000223960 | ENSG00000071073 | MGAT4A | KICH,LUAD,PAAD,PCPG,TGCT,THYM,UVM | PCPG | | | ENSG00000223960 | ENSG00000105270 | CLIP3 | KICH,KIRP,PAAD,PCPG,STAD | PCPG | | | ENSG00000223960 | ENSG00000109576 | AADAT | KICH,LGG,OV,PAAD,PCPG | PCPG | | | ENSG00000223960 | ENSG00000133641 | C12orf29 | KICH,LAML,PAAD,PCPG,SKCM,TGCT,THYM,UCEC | PCPG | | | ENSG00000223960 | ENSG00000004777 | ARHGAP33 | KIRC,KIRP,PAAD,PCPG,TGCT,THCA,THYM | PCPG | | | ENSG00000223960 | ENSG00000137941 | TTLL7 | KIRC,PAAD,PCPG,PRAD,STAD | PCPG | | | ENSG00000223960 | ENSG00000138834 | MAPK8IP3 | KIRC,KIRP,PAAD,PCPG,THCA,THYM,UVM | PCPG | | | ENSG00000223960 | ENSG00000168016 | TRANK1 | KIRC,KIRP,LUAD,PAAD,PCPG,PRAD,TGCT,THYM | PCPG | | | ENSG00000223960 | ENSG00000185418 | TARS3 | KIRP,LAML,LUAD,PCPG,THCA,UVM | PCPG | | | ENSG00000223960 | ENSG00000142875 | PRKACB | OV,PAAD,PCPG,STAD,THCA,THYM,UCEC,UVM | PCPG | |
| LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
| lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
| LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
| LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
| LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type | | ENSG00000223960 | ENSG00000004534 | RBM6 | exon_skip_382458 | ENSG00000060971:chr3:38131595-38131638 | ACAA1 | ENST00000333167 | Frame-shift | UVM,SKCM,THYM,PCPG,TGCT,THCA |
| lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
| LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation | | ENSG00000223960 | ENST00000420672 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1778 | 54 | - | PCPG | | ENSG00000223960 | ENST00000420672 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.2152 | 217 | - | HNSC | | ENSG00000223960 | ENST00000420672 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1621 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1017 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.1603 | 24 | - | PCPG | | ENSG00000223960 | ENST00000454488 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1998 | 185 | - | PCPG | | ENSG00000223960 | ENST00000454488 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.4075 | 380 | - | HNSC | | ENSG00000223960 | ENST00000454488 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1019 | 390 | - | PCPG | | ENSG00000223960 | ENST00000454488 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.1603 | 18 | - | PCPG | | ENSG00000223960 | ENST00000450044 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1998 | 162 | - | PCPG | | ENSG00000223960 | ENST00000450044 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.4075 | 449 | - | HNSC | | ENSG00000223960 | ENST00000450044 | AKR7A2 | ENSG00000053371 | ENST00000330072 | -0.1489 | 661 | - | PCPG | | ENSG00000223960 | ENST00000450044 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1314 | 659 | - | PCPG | | ENSG00000223960 | ENST00000450044 | AKR7A2 | ENSG00000053371 | ENST00000481966 | -0.1004 | 501 | - | PCPG | | ENSG00000223960 | ENST00000450044 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1093 | 563 | - | PCPG | | ENSG00000223960 | ENST00000450044 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.2372 | 1 | - | PCPG | | ENSG00000223960 | ENST00000442036 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1778 | 6 | - | PCPG | | ENSG00000223960 | ENST00000442036 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.1943 | 375 | - | HNSC | | ENSG00000223960 | ENST00000442036 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1482 | 120 | - | PCPG | | ENSG00000223960 | ENST00000442036 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.2542 | 295 | - | PCPG | | ENSG00000223960 | ENST00000453026 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1726 | 286 | - | PCPG | | ENSG00000223960 | ENST00000453026 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.3100 | 1405 | - | HNSC | | ENSG00000223960 | ENST00000453026 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1158 | 273 | - | PCPG | | ENSG00000223960 | ENST00000453026 | AKR7A2 | ENSG00000053371 | ENST00000481966 | -0.1327 | 412 | - | PCPG | | ENSG00000223960 | ENST00000453026 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1044 | 624 | - | PCPG | | ENSG00000223960 | ENST00000453026 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.1462 | 275 | - | PCPG | | ENSG00000223960 | ENST00000436616 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.2094 | 290 | - | PCPG | | ENSG00000223960 | ENST00000436616 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.4075 | 261 | - | HNSC | | ENSG00000223960 | ENST00000436616 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1334 | 612 | - | PCPG | | ENSG00000223960 | ENST00000436616 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1059 | 594 | - | PCPG | | ENSG00000223960 | ENST00000436616 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.1504 | 231 | - | PCPG | | ENSG00000223960 | ENST00000415236 | BCAT2 | ENSG00000105552 | ENST00000598162 | -0.1726 | 257 | - | PCPG | | ENSG00000223960 | ENST00000415236 | RAB25 | ENSG00000132698 | ENST00000615862 | -0.3314 | 555 | - | HNSC | | ENSG00000223960 | ENST00000415236 | AKR7A2 | ENSG00000053371 | ENST00000489286 | -0.1158 | 244 | - | PCPG | | ENSG00000223960 | ENST00000415236 | AKR7A2 | ENSG00000053371 | ENST00000481966 | -0.1021 | 122 | - | PCPG | | ENSG00000223960 | ENST00000415236 | TXN2 | ENSG00000100348 | ENST00000403313 | -0.1130 | 259 | - | PCPG | | ENSG00000223960 | ENST00000415236 | TXN2 | ENSG00000100348 | ENST00000411915 | -0.1462 | 246 | - | PCPG | | ENSG00000223960 | ENST00000454488 | NSDHL | ENSG00000147383 | ENST00000370274 | -0.1040 | 1 | - | PCPG | | ENSG00000223960 | ENST00000454488 | NSDHL | ENSG00000147383 | ENST00000440023 | -0.1040 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LSR | ENSG00000105699 | ENST00000605618 | -0.1009 | 36 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000360614 | -0.1690 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1690 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1690 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1690 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.2256 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1112 | 1 | - | PCPG | | ENSG00000223960 | ENST00000420672 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1081 | 12 | - | PCPG | | ENSG00000223960 | ENST00000420672 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1081 | 14 | - | PCPG | | ENSG00000223960 | ENST00000420672 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.1649 | 1 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000602122 | -0.2049 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000621372 | -0.1477 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000361790 | -0.1477 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000360798 | -0.2049 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000354900 | -0.1559 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000347609 | -0.2321 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LSR | ENSG00000105699 | ENST00000427250 | -0.2049 | 191 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000360614 | -0.1355 | 194 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1300 | 195 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1300 | 195 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1300 | 195 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.2172 | 258 | - | PCPG | | ENSG00000223960 | ENST00000454488 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1158 | 254 | - | PCPG | | ENSG00000223960 | ENST00000454488 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1081 | 6 | - | PCPG | | ENSG00000223960 | ENST00000454488 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1081 | 8 | - | PCPG | | ENSG00000223960 | ENST00000454488 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.1649 | 1 | - | PCPG | | ENSG00000223960 | ENST00000454488 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.3490 | 539 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000602122 | -0.2049 | 168 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000621372 | -0.1062 | 641 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000361790 | -0.1062 | 641 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000360798 | -0.2049 | 168 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000354900 | -0.1062 | 641 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000347609 | -0.1062 | 641 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000427250 | -0.2049 | 168 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LSR | ENSG00000105699 | ENST00000605618 | -0.1254 | 641 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1118 | 264 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1118 | 264 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1118 | 264 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.2214 | 235 | - | PCPG | | ENSG00000223960 | ENST00000450044 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1199 | 488 | - | PCPG | | ENSG00000223960 | ENST00000450044 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1057 | 485 | - | PCPG | | ENSG00000223960 | ENST00000450044 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.1578 | 406 | - | PCPG | | ENSG00000223960 | ENST00000450044 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.1511 | 188 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LSR | ENSG00000105699 | ENST00000605618 | -0.1164 | 575 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LONP1 | ENSG00000196365 | ENST00000360614 | -0.1136 | 308 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1043 | 309 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1043 | 309 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1043 | 309 | - | PCPG | | ENSG00000223960 | ENST00000442036 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.2080 | 624 | - | PCPG | | ENSG00000223960 | ENST00000442036 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1445 | 24 | - | PCPG | | ENSG00000223960 | ENST00000442036 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1240 | 415 | - | PCPG | | ENSG00000223960 | ENST00000442036 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.2137 | 115 | - | PCPG | | ENSG00000223960 | ENST00000442036 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.2456 | 226 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000602122 | -0.1210 | 292 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000621372 | -0.1210 | 292 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000361790 | -0.1210 | 292 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000360798 | -0.1210 | 292 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000354900 | -0.1559 | 142 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000347609 | -0.2321 | 142 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000427250 | -0.1210 | 292 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LSR | ENSG00000105699 | ENST00000605618 | -0.1765 | 361 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1012 | 305 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1012 | 305 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1012 | 305 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.2096 | 230 | - | PCPG | | ENSG00000223960 | ENST00000453026 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1065 | 322 | - | PCPG | | ENSG00000223960 | ENST00000453026 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1069 | 700 | - | PCPG | | ENSG00000223960 | ENST00000453026 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1009 | 546 | - | PCPG | | ENSG00000223960 | ENST00000453026 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.2141 | 635 | - | PCPG | | ENSG00000223960 | ENST00000453026 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.1103 | 690 | - | PCPG | | ENSG00000223960 | ENST00000453026 | NDUFS2 | ENSG00000158864 | ENST00000367993 | -0.1027 | 374 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LSR | ENSG00000105699 | ENST00000602122 | -0.1067 | 605 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LSR | ENSG00000105699 | ENST00000621372 | -0.1067 | 605 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LSR | ENSG00000105699 | ENST00000361790 | -0.1067 | 605 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LSR | ENSG00000105699 | ENST00000360798 | -0.1067 | 605 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LSR | ENSG00000105699 | ENST00000427250 | -0.1067 | 605 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LONP1 | ENSG00000196365 | ENST00000360614 | -0.1012 | 265 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.1905 | 646 | - | PCPG | | ENSG00000223960 | ENST00000436616 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1145 | 566 | - | PCPG | | ENSG00000223960 | ENST00000436616 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1379 | 666 | - | PCPG | | ENSG00000223960 | ENST00000436616 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1442 | 632 | - | PCPG | | ENSG00000223960 | ENST00000436616 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.1178 | 632 | - | PCPG | | ENSG00000223960 | ENST00000436616 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.1672 | 420 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000602122 | -0.1166 | 551 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000621372 | -0.1166 | 553 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000361790 | -0.1166 | 553 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000360798 | -0.1166 | 551 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000354900 | -0.1559 | 113 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000347609 | -0.2321 | 113 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000427250 | -0.1166 | 551 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LSR | ENSG00000105699 | ENST00000605618 | -0.1266 | 519 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000360614 | -0.1414 | 484 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000585374 | -0.1414 | 485 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000593119 | -0.1414 | 485 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000540670 | -0.1414 | 485 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000590729 | -0.3229 | 605 | - | PCPG | | ENSG00000223960 | ENST00000415236 | LONP1 | ENSG00000196365 | ENST00000586617 | -0.1053 | 109 | - | PCPG | | ENSG00000223960 | ENST00000415236 | MRPL37 | ENSG00000116221 | ENST00000360840 | -0.1014 | 503 | - | PCPG | | ENSG00000223960 | ENST00000415236 | MRPL37 | ENSG00000116221 | ENST00000336230 | -0.1014 | 503 | - | PCPG | | ENSG00000223960 | ENST00000415236 | MRPL37 | ENSG00000116221 | ENST00000605337 | -0.1854 | 528 | - | PCPG | | ENSG00000223960 | ENST00000415236 | MRPL37 | ENSG00000116221 | ENST00000398219 | -0.1664 | 183 | - | PCPG |
| lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
| LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types |
| ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
| lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | | ENSG00000223960.5 | ENST00000420672.1 | 57 | 67 | 240 | | ENSG00000223960.5 | ENST00000454488.4 | 61 | 419 | 234 | | ENSG00000223960.5 | ENST00000450044.1 | 39 | 376 | 495 | | ENSG00000223960.5 | ENST00000442036.1 | 61 | 234 | 419 | | ENSG00000223960.5 | ENST00000453026.5 | 45 | 111 | 248 | | ENSG00000223960.5 | ENST00000436616.2 | 65 | 1720 | 1917 | | ENSG00000223960.5 | ENST00000415236.1 | 86 | 512 | 772 |
|
